Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 591 results

7A86
DownloadVisualize
BU of 7a86 by Molmil
rsGreen0.7-K206A-F145L partially in the green-off state
Descriptor: Green fluorescent protein, TRIETHYLENE GLYCOL
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7A82
DownloadVisualize
BU of 7a82 by Molmil
rsGreen0.7-K206A-F145A partially in the green-off state
Descriptor: Green fluorescent protein
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021
1YHI
DownloadVisualize
BU of 1yhi by Molmil
Uncyclized precursor structure of S65A Y66S R96A GFP variant
Descriptor: Green Fluorescent Protein
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2005-01-08
Release date:2005-02-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Understanding GFP Chromophore Biosynthesis: Controlling Backbone Cyclization and Modifying Post-translational Chemistry(,).
Biochemistry, 44, 2005
6UHK
DownloadVisualize
BU of 6uhk by Molmil
Crystal Structure of C176 mGFP
Descriptor: C176 mGFP
Authors:Winegar, P.W, Hayes, O.G, McMillan, J.R, Figg, C.A, Focia, P.J, Mirkin, C.A.
Deposit date:2019-09-27
Release date:2020-03-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:DNA-Directed Protein Packing within Single Crystals.
Chem, 6, 2020
1RMM
DownloadVisualize
BU of 1rmm by Molmil
Probing the Role of Tryptophans in Aequorea Victoria Green Fluorescent Proteins with an Expanded Genetic Code
Descriptor: SIGF1-GFP fusion protein
Authors:Budisa, N, Pal, P.P, Alefelder, S, Birle, P, Krywcun, T, Rubini, M, Wenger, W, Bae, J.H, Steiner, T.
Deposit date:2003-11-28
Release date:2004-06-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Probing the role of tryptophans in Aequorea victoria green fluorescent proteins with an expanded genetic code
Biol.Chem., 385, 2004
3SG7
DownloadVisualize
BU of 3sg7 by Molmil
Crystal Structure of GCaMP3-KF(linker 1)
Descriptor: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ...
Authors:Schreiter, E.R, Akerboom, J, Looger, L.L.
Deposit date:2011-06-14
Release date:2012-06-20
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Optimization of a GCaMP calcium indicator for neural activity imaging.
J.Neurosci., 32, 2012
3SG5
DownloadVisualize
BU of 3sg5 by Molmil
Crystal Structure of Dimeric GCaMP3-D380Y, QP(linker 1), LP(linker 2)
Descriptor: CALCIUM ION, GLYCEROL, Myosin light chain kinase, ...
Authors:Schreiter, E.R, Akerboom, J, Looger, L.L.
Deposit date:2011-06-14
Release date:2012-06-20
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Optimization of a GCaMP calcium indicator for neural activity imaging.
J.Neurosci., 32, 2012
1EMA
DownloadVisualize
BU of 1ema by Molmil
GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Ormo, M, Remington, S.J.
Deposit date:1996-08-01
Release date:1996-11-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the Aequorea victoria green fluorescent protein.
Science, 273, 1996
4ZF3
DownloadVisualize
BU of 4zf3 by Molmil
Crystal structure of Green Fluorescent Protein (GFP); S65T, H148D; circular permutant ( 50-51)
Descriptor: Green fluorescent protein
Authors:Oltrogge, L.M, Boxer, S.G.
Deposit date:2015-04-21
Release date:2015-06-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Short Hydrogen Bonds and Proton Delocalization in Green Fluorescent Protein (GFP).
Acs Cent.Sci., 1, 2015
3GJ2
DownloadVisualize
BU of 3gj2 by Molmil
Photoactivated state of PA-GFP
Descriptor: CHLORIDE ION, Green fluorescent protein
Authors:Henderson, J.N, Gepshtein, R, Heenan, J.R, Kallio, K, Huppert, D, Remington, S.J.
Deposit date:2009-03-07
Release date:2009-03-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and mechanism of the photoactivatable green fluorescent protein.
J.Am.Chem.Soc., 131, 2009
1GFL
DownloadVisualize
BU of 1gfl by Molmil
STRUCTURE OF GREEN FLUORESCENT PROTEIN
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Yang, F, Moss, L.G, Phillips Jr, G.N.
Deposit date:1996-08-23
Release date:1997-01-11
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The molecular structure of green fluorescent protein.
Nat.Biotechnol., 14, 1996
4H47
DownloadVisualize
BU of 4h47 by Molmil
1.9 angstrom CyPet structure at pH5.2
Descriptor: ACETATE ION, Green fluorescent protein, SULFATE ION
Authors:Hu, X.-J, Liu, R.
Deposit date:2012-09-17
Release date:2013-09-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights of the fluorescent states of CyPet
To be Published
2OKW
DownloadVisualize
BU of 2okw by Molmil
A non-invasive GFP-based biosensor for mercury ions
Descriptor: Green fluorescent protein
Authors:Chapleau, R.R, Blomberg, R, Ford, P.C, Sagermann, M.
Deposit date:2007-01-17
Release date:2007-12-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Design of a highly specific and noninvasive biosensor suitable for real-time in vivo imaging of mercury (II) uptake.
Protein Sci., 17, 2008
1JC1
DownloadVisualize
BU of 1jc1 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF A REDOX-SENSITIVE GREEN FLUORESCENT PROTEIN VARIANT IN A OXIDIZED FORM
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Hanson, G.T, Aggeler, R, Oglesbee, D, Cannon, M, Capaldi, R.A, Tsien, R.Y, Remington, S.J.
Deposit date:2001-06-07
Release date:2003-09-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Investigating mitochondrial redox potential with redox-sensitive green fluorescent protein indicators.
J.Biol.Chem., 279, 2004
6HR1
DownloadVisualize
BU of 6hr1 by Molmil
Crystal structure of the YFPnano fusion protein
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ...
Authors:Benoit, R.M.
Deposit date:2018-09-26
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Chimeric single alpha-helical domains as rigid fusion protein connections for protein nanotechnology and structural biology.
Structure, 2021
6SM0
DownloadVisualize
BU of 6sm0 by Molmil
Venus 66 p-Azido-L-Phenylalanin (azF) variant, dark grown
Descriptor: Green fluorescent protein, OXYGEN MOLECULE, SULFATE ION, ...
Authors:Rizkallah, P.J, Al Maslookhi, H.S, Jones, D.D.
Deposit date:2019-08-21
Release date:2021-02-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Stalling chromophore synthesis of the fluorescent protein Venus reveals the molecular basis of the final oxidation step.
Chem Sci, 12, 2021
6UHL
DownloadVisualize
BU of 6uhl by Molmil
Crystal Structure of C148 mGFP-scDNA-1
Descriptor: C148 mGFP-scDNA-1, UNKNOWN LIGAND
Authors:Winegar, P.W, Hayes, O.G, McMillan, J.R, Figg, C.A, Focia, P.J, Mirkin, C.A.
Deposit date:2019-09-27
Release date:2020-03-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:DNA-Directed Protein Packing within Single Crystals.
Chem, 6, 2020
6B7T
DownloadVisualize
BU of 6b7t by Molmil
Truncated strand 10-less green fluorescent protein
Descriptor: Green fluorescent protein,Green fluorescent protein
Authors:Deng, A, Boxer, S.G.
Deposit date:2017-10-05
Release date:2017-12-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural Insight into the Photochemistry of Split Green Fluorescent Proteins: A Unique Role for a His-Tag.
J. Am. Chem. Soc., 140, 2018
6UHN
DownloadVisualize
BU of 6uhn by Molmil
Crystal Structure of C148 mGFP-cDNA-1
Descriptor: C148 mGFP-cDNA-1, UNKNOWN LIGAND
Authors:Winegar, P.W, Hayes, O.G, McMillan, J.R, Figg, C.A, Focia, P.J, Mirkin, C.A.
Deposit date:2019-09-27
Release date:2020-03-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:DNA-Directed Protein Packing within Single Crystals.
Chem, 6, 2020
7A8A
DownloadVisualize
BU of 7a8a by Molmil
rsGreen0.7-K206A-F145Q partially in the green-off state
Descriptor: Green fluorescent protein
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021
6QUI
DownloadVisualize
BU of 6qui by Molmil
GHK tagged GFP variant at 17Kev
Descriptor: COPPER (II) ION, GLYCEROL, Green fluorescent protein, ...
Authors:Huyton, T, Gorlich, D.
Deposit date:2019-02-27
Release date:2020-05-27
Last modified:2022-12-07
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography.
Acta Crystallogr D Struct Biol, 76, 2020
2O2B
DownloadVisualize
BU of 2o2b by Molmil
Spectroscopic and Structural Study of the Heterotropic Linkage between Halide and Proton Ion Binding to Gfp Proteins: E2(GFP)-I Complex
Descriptor: Green fluorescent protein, IODIDE ION
Authors:Garau, G.
Deposit date:2006-11-29
Release date:2007-05-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Spectroscopic and Structural Study of Proton and Halide Ion Cooperative Binding to GFP.
Biophys.J., 93, 2007
5FJI
DownloadVisualize
BU of 5fji by Molmil
Three-dimensional structures of two heavily N-glycosylated Aspergillus sp. Family GH3 beta-D-glucosidases
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-GLUCOSIDASE, ...
Authors:Agirre, J, Ariza, A, Offen, W.A, Turkenburg, J.P, Roberts, S.M, McNicholas, S, Harris, P.V, McBrayer, B, Dohnalek, J, Cowtan, K.D, Davies, G.J, Wilson, K.S.
Deposit date:2015-10-09
Release date:2016-02-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Three-Dimensional Structures of Two Heavily N-Glycosylated Aspergillus Sp. Family Gh3 Beta-D-Glucosidases
Acta Crystallogr.,Sect.D, 72, 2016
7O7X
DownloadVisualize
BU of 7o7x by Molmil
Crystal structure of rsEGFP2 mutant V151A in the non-fluorescent off-state determined by serial femtosecond crystallography at room temperature
Descriptor: Green fluorescent protein
Authors:Hadjidemetriou, K, Coquelle, N, Barends, T.R.M, Schlichting, I, Colletier, J.-P, Weik, M.
Deposit date:2021-04-13
Release date:2022-07-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Rational Control of Off-State Heterogeneity in a Photoswitchable Fluorescent Protein Provides Switching Contrast Enhancement.
Chemphyschem, 23, 2022
8SFX
DownloadVisualize
BU of 8sfx by Molmil
High Affinity nanobodies against GFP
Descriptor: D-MALATE, GLYCEROL, Green fluorescent protein, ...
Authors:Ketaren, N.E, Rout, M.P, Bonanno, J.B, Almo, S.C.
Deposit date:2023-04-11
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:High Affinity nanobodies against GFP
To Be Published

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon