Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 55 results

6PXO
DownloadVisualize
BU of 6pxo by Molmil
Human Casein Kinase 1 delta (anion-free crystallization conditions)
Descriptor: Casein kinase I isoform delta
Authors:Freeberg, A, Philpott, J.M, Tripathi, S.M, Partch, C.L.
Deposit date:2019-07-26
Release date:2020-02-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Casein kinase 1 dynamics underlie substrate selectivity and the PER2 circadian phosphoswitch.
Elife, 9, 2020
6PXP
DownloadVisualize
BU of 6pxp by Molmil
Human Casein Kinase 1 delta Site 2 mutant (K171E)
Descriptor: Casein kinase I isoform delta, SULFATE ION
Authors:Yee, L, Philpott, J.M, Tripathi, S.M, Partch, C.L.
Deposit date:2019-07-26
Release date:2020-02-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Casein kinase 1 dynamics underlie substrate selectivity and the PER2 circadian phosphoswitch.
Elife, 9, 2020
6PXN
DownloadVisualize
BU of 6pxn by Molmil
Human Casein Kinase 1 delta Tau mutant (R178C)
Descriptor: Casein kinase I isoform delta, SULFATE ION
Authors:Philpott, J.M, Tripathi, S.M, Partch, C.L.
Deposit date:2019-07-26
Release date:2020-02-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Casein kinase 1 dynamics underlie substrate selectivity and the PER2 circadian phosphoswitch.
Elife, 9, 2020
4FB2
DownloadVisualize
BU of 4fb2 by Molmil
Crystal Structure of Substrate-Free P450cin
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, P450cin, ...
Authors:Madrona, Y, Tripathi, S.M, Li, H, Poulos, T.L.
Deposit date:2012-05-22
Release date:2012-07-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal structures of substrate-free and nitrosyl cytochrome p450cin: implications for o(2) activation.
Biochemistry, 51, 2012
4FMX
DownloadVisualize
BU of 4fmx by Molmil
Crystal Structure of Substrate-Bound P450cin
Descriptor: 1,3,3-TRIMETHYL-2-OXABICYCLO[2.2.2]OCTANE, GLYCEROL, P450cin, ...
Authors:Madrona, Y, Tripathi, S.M, Huiying, L, Poulos, T.L.
Deposit date:2012-06-18
Release date:2012-07-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.554 Å)
Cite:Crystal structures of substrate-free and nitrosyl cytochrome p450cin: implications for o(2) activation.
Biochemistry, 51, 2012
6NPR
DownloadVisualize
BU of 6npr by Molmil
Crystal structure of H-2Dd with C84-C139 disulfide in complex with gp120 derived peptide P18-I10
Descriptor: ARG-GLY-PRO-GLY-ARG-ALA-PHE-VAL-THR-ILE, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ...
Authors:Toor, J, McShan, A.C, Tripathi, S.M, Sgourakis, N.G.
Deposit date:2019-01-18
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Molecular determinants of chaperone interactions on MHC-I for folding and antigen repertoire selection.
Proc.Natl.Acad.Sci.USA, 116, 2019
6NBL
DownloadVisualize
BU of 6nbl by Molmil
Cytochrome P450cam-putidaredoxin complex bound to camphor and cyanide
Descriptor: 1,1'-hexane-1,6-diyldipyrrolidine-2,5-dione, CALCIUM ION, CAMPHOR, ...
Authors:Follmer, A.H, Tripathi, S.M, Poulos, T.L.
Deposit date:2018-12-07
Release date:2019-03-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Ligand and Redox Partner Binding Generates a New Conformational State in Cytochrome P450cam (CYP101A1).
J. Am. Chem. Soc., 141, 2019
5TUV
DownloadVisualize
BU of 5tuv by Molmil
Crystal structure of the E2F5-DP1-p107 ternary complex
Descriptor: Retinoblastoma-like protein 1, Transcription factor DP1, Transcription factor E2F5
Authors:Liban, T.J, Tripathi, S.M, Rubin, S.M.
Deposit date:2016-11-07
Release date:2017-05-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Conservation and divergence of C-terminal domain structure in the retinoblastoma protein family.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5TUU
DownloadVisualize
BU of 5tuu by Molmil
Crystal structure of the E2F4-DP1 coiled coil and marked-box domains
Descriptor: GLYCEROL, Transcription factor DP1, Transcription factor E2F4
Authors:Liban, T.J, Rubin, S.M, Tripathi, S.M.
Deposit date:2016-11-07
Release date:2017-05-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.251 Å)
Cite:Conservation and divergence of C-terminal domain structure in the retinoblastoma protein family.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5FD3
DownloadVisualize
BU of 5fd3 by Molmil
Structure of Lin54 tesmin domain bound to DNA
Descriptor: DNA (5'-D(*CP*AP*GP*TP*TP*TP*CP*AP*AP*AP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*TP*TP*TP*GP*AP*AP*AP*CP*T)-3'), Protein lin-54 homolog, ...
Authors:Marceau, A.H, Felthousen, J.G, Goetsch, P.D, Lee, H, Tripathi, S.M, Strome, S, Litovchick, L, Rubin, S.M.
Deposit date:2015-12-15
Release date:2016-08-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structural basis for LIN54 recognition of CHR elements in cell cycle-regulated promoters.
Nat Commun, 7, 2016
5UQ2
DownloadVisualize
BU of 5uq2 by Molmil
Crystal structure of human Cdk2-Spy1 complex
Descriptor: Cyclin-dependent kinase 2, Speedy protein A
Authors:McGrath, D.A, Tripathi, S.M, Rubin, S.M.
Deposit date:2017-02-06
Release date:2017-07-05
Last modified:2017-08-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of divergent cyclin-dependent kinase activation by Spy1/RINGO proteins.
EMBO J., 36, 2017
5UQ3
DownloadVisualize
BU of 5uq3 by Molmil
Crystal structure of human Cdk2-Spy1-P27 ternary complex
Descriptor: Cyclin-dependent kinase 2, Cyclin-dependent kinase inhibitor 1B, Speedy protein A
Authors:McGrath, D.A, Tripathi, S.M, Rubin, S.M.
Deposit date:2017-02-06
Release date:2017-07-05
Last modified:2017-08-09
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural basis of divergent cyclin-dependent kinase activation by Spy1/RINGO proteins.
EMBO J., 36, 2017
5UQ1
DownloadVisualize
BU of 5uq1 by Molmil
Crystal structure of human Cdk2-Spy1 complex
Descriptor: Cyclin-dependent kinase 2, Speedy protein A
Authors:McGrath, D.A, Tripathi, S.M, Rubin, S.M.
Deposit date:2017-02-06
Release date:2017-07-05
Last modified:2017-08-09
Method:X-RAY DIFFRACTION (3.201 Å)
Cite:Structural basis of divergent cyclin-dependent kinase activation by Spy1/RINGO proteins.
EMBO J., 36, 2017
7SMD
DownloadVisualize
BU of 7smd by Molmil
p107 pocket domain complexed with EID1 peptide
Descriptor: EP300-interacting inhibitor of differentiation 1, Retinoblastoma-like protein 1, SULFATE ION
Authors:Putta, S, Fernandez, S.M, Tripathi, S.M, Muller, G.A, Rubin, S.M.
Deposit date:2021-10-25
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for tunable affinity and specificity of LxCxE-dependent protein interactions with the retinoblastoma protein family.
Structure, 30, 2022
7SME
DownloadVisualize
BU of 7sme by Molmil
p107 pocket domain complexed with HDAC1 peptide
Descriptor: Histone deacetylase 1, Retinoblastoma-like protein 1, SULFATE ION
Authors:Putta, S, Fernandez, S.M, Tripathi, S.M, Muller, G.A, Rubin, S.M.
Deposit date:2021-10-25
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structural basis for tunable affinity and specificity of LxCxE-dependent protein interactions with the retinoblastoma protein family.
Structure, 30, 2022
7SMF
DownloadVisualize
BU of 7smf by Molmil
p107 pocket domain complexed with mutated HDAC1-3X peptide
Descriptor: Histone deacetylase 1, Retinoblastoma-like protein 1, SULFATE ION
Authors:Putta, S, Fernandez, S.M, Tripathi, S.M, Muller, G.A, Rubin, S.M.
Deposit date:2021-10-25
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for tunable affinity and specificity of LxCxE-dependent protein interactions with the retinoblastoma protein family.
Structure, 30, 2022
7SMC
DownloadVisualize
BU of 7smc by Molmil
p107 pocket domain complexed with ARID4A peptide
Descriptor: AT-rich interactive domain-containing protein 4A, Retinoblastoma-like protein 1, SULFATE ION
Authors:Putta, S, Fernandez, S.M, Tripathi, S.M, Muller, G.A, Rubin, S.M.
Deposit date:2021-10-25
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for tunable affinity and specificity of LxCxE-dependent protein interactions with the retinoblastoma protein family.
Structure, 30, 2022
6C48
DownloadVisualize
BU of 6c48 by Molmil
Crystal structure of B-Myb-LIN9-LIN52 complex
Descriptor: Myb-related protein B, Protein lin-52 homolog, Protein lin-9 homolog, ...
Authors:Guiley, K.Z, Tripathi, S.M, Rubin, S.M.
Deposit date:2018-01-11
Release date:2018-09-19
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural mechanism of Myb-MuvB assembly.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8GCI
DownloadVisualize
BU of 8gci by Molmil
Crystal structure of C. elegans LIN-42 PAS-B domain
Descriptor: Period protein homolog lin-42
Authors:Spangler, B.K, Coronado, A.R, Tripathi, S.M, Ward, J.D, Partch, C.L.
Deposit date:2023-03-01
Release date:2023-03-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Crystal structure of C. elegans LIN-42 PAS-B domain
To Be Published
8D7M
DownloadVisualize
BU of 8d7m by Molmil
Human Casein kinase 1 delta in complex with phosphorylated human PERIOD2 FASP peptide
Descriptor: Casein kinase I isoform delta, Period circadian protein homolog 2 peptide
Authors:Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
Deposit date:2022-06-07
Release date:2023-05-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
8D7O
DownloadVisualize
BU of 8d7o by Molmil
Human Casein kinase 1 delta in complex with phosphorylated human PERIOD2 FASP peptide
Descriptor: Casein kinase I isoform delta, Period circadian protein homolog 2 peptide
Authors:Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
Deposit date:2022-06-07
Release date:2023-05-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
8D7P
DownloadVisualize
BU of 8d7p by Molmil
Human Casein kinase 1 delta in complex with phosphorylated Drosophila PERIOD peptide
Descriptor: Casein kinase I isoform delta, Period circadian protein peptide
Authors:Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
Deposit date:2022-06-07
Release date:2023-05-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
8D7N
DownloadVisualize
BU of 8d7n by Molmil
Human Casein kinase 1 delta in complex with phosphorylated human PERIOD2 FASP peptide
Descriptor: Casein kinase I isoform delta, Period circadian protein homolog 2 peptide
Authors:Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
Deposit date:2022-06-07
Release date:2023-05-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
4FYZ
DownloadVisualize
BU of 4fyz by Molmil
Crystal Structure of Nitrosyl Cytochrome P450cin
Descriptor: 1,3,3-TRIMETHYL-2-OXABICYCLO[2.2.2]OCTANE, DI(HYDROXYETHYL)ETHER, NITRIC OXIDE, ...
Authors:Madrona, Y, Tripathi, S.M, Li, H, Poulos, T.L.
Deposit date:2012-07-05
Release date:2012-07-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Crystal structures of substrate-free and nitrosyl cytochrome p450cin: implications for o(2) activation.
Biochemistry, 51, 2012
4G3R
DownloadVisualize
BU of 4g3r by Molmil
Crystal Structure of Nitrosyl Cytochrome P450cam
Descriptor: CAMPHOR, Camphor 5-monooxygenase, NITRIC OXIDE, ...
Authors:Madrona, Y, Tripathi, S.M, Li, H, Poulos, T.L.
Deposit date:2012-07-15
Release date:2012-08-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of substrate-free and nitrosyl cytochrome p450cin: implications for o(2) activation.
Biochemistry, 51, 2012

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon