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PDB: 257 件

3M8F
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BU of 3m8f by Molmil
Protein structure of type III plasmid segregation TubR mutant
分子名称: Putative DNA-binding protein
著者Schumacher, M.A, Ni, L.
登録日2010-03-17
公開日2010-07-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献From the Cover: Plasmid protein TubR uses a distinct mode of HTH-DNA binding and recruits the prokaryotic tubulin homolog TubZ to effect DNA partition.
Proc.Natl.Acad.Sci.USA, 107, 2010
3JS6
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BU of 3js6 by Molmil
Crystal structure of apo psk41 parM protein
分子名称: Uncharacterized ParM protein
著者Schumacher, M.A, Xu, W, Firth, N.
登録日2009-09-09
公開日2010-01-26
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure and filament dynamics of the pSK41 actin-like ParM protein: implications for plasmid DNA segregation.
J.Biol.Chem., 285, 2010
3MKW
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BU of 3mkw by Molmil
Structure of sopB(155-272)-18mer complex, I23 form
分子名称: DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3'), Protein sopB, SULFATE ION
著者Schumacher, M.A, Piro, K, Xu, W.
登録日2010-04-15
公開日2010-05-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Insight into F plasmid DNA segregation revealed by structures of SopB and SopB-DNA complexes.
Nucleic Acids Res., 38, 2010
3M9A
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BU of 3m9a by Molmil
Protein structure of type III plasmid segregation TubR
分子名称: Putative DNA-binding protein
著者Schumacher, M.A, Ni, L.
登録日2010-03-21
公開日2010-07-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献From the Cover: Plasmid protein TubR uses a distinct mode of HTH-DNA binding and recruits the prokaryotic tubulin homolog TubZ to effect DNA partition.
Proc.Natl.Acad.Sci.USA, 107, 2010
4DZZ
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BU of 4dzz by Molmil
Structure of ParF-ADP, crystal form 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Plasmid partitioning protein ParF
著者Schumacher, M.A, Ye, Q, Barge, M.R, Barilla, D, Hayes, F.
登録日2012-03-01
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Mechanism of ATP-induced Polymerization of the Partition Factor ParF: IMPLICATIONS FOR DNA SEGREGATION.
J.Biol.Chem., 287, 2012
4E09
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BU of 4e09 by Molmil
Structure of ParF-AMPPCP, I422 form
分子名称: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Plasmid partitioning protein ParF, SULFATE ION
著者Schumacher, M.A, Ye, Q, Barge, M.R, Barilla, D, Hayes, F.
登録日2012-03-02
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Structural Mechanism of ATP-induced Polymerization of the Partition Factor ParF: IMPLICATIONS FOR DNA SEGREGATION.
J.Biol.Chem., 287, 2012
4E07
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BU of 4e07 by Molmil
ParF-AMPPCP-C2221 form
分子名称: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Plasmid partitioning protein ParF
著者Schumacher, M.A, Ye, Q, Barge, M.R, Barilla, D, Hayes, F.
登録日2012-03-02
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural Mechanism of ATP-induced Polymerization of the Partition Factor ParF: IMPLICATIONS FOR DNA SEGREGATION.
J.Biol.Chem., 287, 2012
3MKY
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BU of 3mky by Molmil
Structure of SopB(155-323)-18mer DNA complex, I23 form
分子名称: DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3'), Protein sopB, SULFATE ION
著者Schumacher, M.A, Piro, K, Xu, W.
登録日2010-04-15
公開日2010-05-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Insight into F plasmid DNA segregation revealed by structures of SopB and SopB-DNA complexes.
Nucleic Acids Res., 38, 2010
4GFK
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BU of 4gfk by Molmil
structures of NO factors
分子名称: Nucleoid occlusion factor SlmA
著者Schumacher, M.A.
登録日2012-08-03
公開日2013-06-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献SlmA forms a higher-order structure on DNA that inhibits cytokinetic Z-ring formation over the nucleoid.
Proc.Natl.Acad.Sci.USA, 110, 2013
7TDP
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BU of 7tdp by Molmil
Structure of Paenibacillus polymyxa GS bound to Met-Sox-P-ADP (Transition state complex) to 1.98 Angstom
分子名称: ADENOSINE-5'-DIPHOSPHATE, Glutamine synthetase, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, ...
著者Schumacher, M.A.
登録日2022-01-02
公開日2022-06-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria.
Nat Commun, 13, 2022
7U02
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BU of 7u02 by Molmil
Structure of the C. crescentus DriD C-domain bound to ssDNA
分子名称: DNA (5'-D(P*AP*CP*G)-3'), SULFATE ION, WYL domain-containing protein
著者Schumacher, M.A.
登録日2022-02-17
公開日2022-06-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献ssDNA is an allosteric regulator of the C. crescentus SOS-independent DNA damage response transcription activator, DriD.
Genes Dev., 36, 2022
7TEA
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BU of 7tea by Molmil
Crystal structure of S. aureus GlnR-DNA complex
分子名称: CALCIUM ION, DNA (5'-D(*CP*GP*TP*GP*TP*CP*AP*GP*AP*TP*AP*AP*TP*CP*TP*GP*AP*CP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*GP*TP*CP*AP*GP*AP*TP*TP*AP*TP*CP*TP*GP*AP*CP*AP*CP*G)-3'), ...
著者Schumacher, M.A.
登録日2022-01-04
公開日2022-06-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria.
Nat Commun, 13, 2022
7TEC
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BU of 7tec by Molmil
Structure of the Listeria monocytogenes GlnR-DNA complex to 3.45 Angstrom
分子名称: DNA (5'-D(*CP*GP*TP*GP*TP*CP*AP*GP*AP*TP*AP*AP*TP*CP*TP*GP*AP*CP*AP*CP*G)-3'), HTH-type transcriptional regulator GlnR
著者Schumacher, M.A, Brennan, R.G.
登録日2022-01-04
公開日2022-06-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria.
Nat Commun, 13, 2022
7TDV
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BU of 7tdv by Molmil
Crystal structure of S. aureus glutamine synthetase in Met-Sox-P/ADP transition state complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Glutamine synthetase, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, ...
著者Schumacher, M.A.
登録日2022-01-03
公開日2022-06-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria.
Nat Commun, 13, 2022
7TEN
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BU of 7ten by Molmil
Crystal structure of the Listeria monocytogenes GS-Met-Sox-P- ADP complex to 3.5 Angstrom
分子名称: ADENOSINE-5'-DIPHOSPHATE, Glutamine synthetase, L-METHIONINE-S-SULFOXIMINE PHOSPHATE
著者Schumacher, M.A.
登録日2022-01-05
公開日2022-06-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria.
Nat Commun, 13, 2022
7U3A
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BU of 7u3a by Molmil
Structure of the Streptomyces venezuelae GlgX-c-di-GMP complex
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Glycogen debranching enzyme GlgX
著者Schumacher, M.A.
登録日2022-02-26
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.34 Å)
主引用文献Allosteric regulation of glycogen breakdown by the second messenger cyclic di-GMP.
Nat Commun, 13, 2022
7U3D
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BU of 7u3d by Molmil
Structure of S. venezuelae GlgX-c-di-GMP-acarbose complex (4.6)
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Glycogen debranching enzyme GlgX
著者Schumacher, M.A.
登録日2022-02-27
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Allosteric regulation of glycogen breakdown by the second messenger cyclic di-GMP.
Nat Commun, 13, 2022
4YG4
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BU of 4yg4 by Molmil
HipB-O1-O1* complex
分子名称: Antitoxin HipB, DNA (28-MER), DNA (5'-D(*AP*TP*AP*TP*CP*CP*CP*CP*TP*TP*AP*AP*GP*GP*GP*GP*AP*TP*AP*A)-3')
著者Schumacher, M.A.
登録日2015-02-25
公開日2015-07-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献HipBA-promoter structures reveal the basis of heritable multidrug tolerance.
Nature, 524, 2015
4YG7
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BU of 4yg7 by Molmil
Structure of FL autorepression promoter complex
分子名称: Antitoxin HipB, DNA (50-MER), Serine/threonine-protein kinase HipA
著者Schumacher, M.A.
登録日2015-02-25
公開日2015-07-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.77 Å)
主引用文献HipBA-promoter structures reveal the basis of heritable multidrug tolerance.
Nature, 524, 2015
7TZV
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BU of 7tzv by Molmil
Structure of DriD C-domain bound to 9mer ssDNA
分子名称: DNA (5'-D(*TP*AP*GP*TP*CP*TP*AP*CP*T)-3'), WYL domain-containing protein
著者Schumacher, M.A, Laub, M.
登録日2022-02-16
公開日2022-06-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献ssDNA is an allosteric regulator of the C. crescentus SOS-independent DNA damage response transcription activator, DriD.
Genes Dev., 36, 2022
7U3B
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BU of 7u3b by Molmil
Structure of S. venezuelae GlgX bound to c-di-GMP and acarbose (pH 8.5)
分子名称: 4-O-(4,6-dideoxy-4-{[(1S,2S,3S,4R,5S)-2,3,4-trihydroxy-5-(hydroxymethyl)cyclohexyl]amino}-alpha-D-glucopyranosyl)-beta-D-glucopyranose, 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Glycogen debranching enzyme GlgX, ...
著者Schumacher, M.A, Tschowri, N.
登録日2022-02-26
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Allosteric regulation of glycogen breakdown by the second messenger cyclic di-GMP.
Nat Commun, 13, 2022
7U39
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Structure of the apo form of Streptomyces venezuelae GlgX, the glycogen debranching enzyme
分子名称: Glycogen debranching enzyme GlgX
著者Schumacher, M.A.
登録日2022-02-26
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.51 Å)
主引用文献Allosteric regulation of glycogen breakdown by the second messenger cyclic di-GMP.
Nat Commun, 13, 2022
4YG1
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BU of 4yg1 by Molmil
HipB-O1-O2 complex/P21212 crystal form
分子名称: Antitoxin HipB, DNA (48-MER)
著者Schumacher, M.A.
登録日2015-02-25
公開日2015-07-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献HipBA-promoter structures reveal the basis of heritable multidrug tolerance.
Nature, 524, 2015
3VEA
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BU of 3vea by Molmil
Crystal Structure of matP-matS23mer
分子名称: 5'-D(*AP*GP*TP*TP*CP*GP*TP*GP*AP*CP*AP*AP*TP*GP*TP*CP*AP*CP*GP*AP*AP*CP*T)-3', 5'-D(*AP*GP*TP*TP*CP*GP*TP*GP*AP*CP*AP*TP*TP*GP*TP*CP*AP*CP*GP*AP*AP*CP*T)-3', Macrodomain Ter protein
著者Schumacher, M.A.
登録日2012-01-07
公開日2012-11-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Molecular basis for a protein-mediated DNA-bridging mechanism that functions in condensation of the E. coli chromosome.
Mol.Cell, 48, 2012
3VEB
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BU of 3veb by Molmil
Crystal Structure of Matp-matS
分子名称: 5'-D(*AP*CP*GP*TP*GP*AP*CP*AP*AP*TP*GP*TP*CP*AP*CP*G)-3', 5'-D(*TP*CP*GP*TP*GP*AP*CP*AP*TP*TP*GP*TP*CP*AP*CP*G)-3', CALCIUM ION, ...
著者Schumacher, M.A.
登録日2012-01-07
公開日2012-11-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Molecular basis for a protein-mediated DNA-bridging mechanism that functions in condensation of the E. coli chromosome.
Mol.Cell, 48, 2012

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件を2024-11-06に公開中

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