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PDB: 257 件

4LSD
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Myokine structure
分子名称: Fibronectin type III domain-containing protein 5
著者Schumacher, M.A, Ohashi, T, Shah, R.S, Chinnam, N, Erickson, H.
登録日2013-07-22
公開日2013-10-16
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献The structure of irisin reveals a novel intersubunit beta-sheet fibronectin type III (FNIII) dimer: implications for receptor activation.
J.Biol.Chem., 288, 2013
9BE2
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BU of 9be2 by Molmil
Structure of the E. coli nucleic associated protein, YejK
分子名称: Nucleoid-associated protein YejK
著者Schumacher, M.A.
登録日2024-04-13
公開日2024-05-15
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (3.56 Å)
主引用文献Structure of the E. coli nucleoid-associated protein YejK reveals a novel DNA binding clamp.
Nucleic Acids Res., 52, 2024
6ALX
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BU of 6alx by Molmil
Structure of F. tularensis MglA-SspA solved in the presence of polyP
分子名称: Macrophage growth locus A, Stringent starvation protein A
著者Schumacher, M.A.
登録日2017-08-08
公開日2017-08-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Dissection of the molecular circuitry controlling virulence in Francisella tularensis.
Genes Dev., 31, 2017
6AMK
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BU of 6amk by Molmil
Structure of Streptomyces venezuelae BldC-whiI opt complex
分子名称: DNA (5'-D(*AP*AP*TP*GP*TP*CP*CP*GP*AP*AP*TP*TP*AP*CP*CP*CP*GP*AP*AP*TP*TP*G)-3'), DNA (5'-D(*TP*TP*CP*AP*AP*TP*TP*CP*GP*GP*GP*TP*AP*AP*TP*TP*CP*GP*GP*GP*CP*A)-3'), Putative DNA-binding protein
著者Schumacher, M.A.
登録日2017-08-09
公開日2018-03-28
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.288 Å)
主引用文献The MerR-like protein BldC binds DNA direct repeats as cooperative multimers to regulate Streptomyces development.
Nat Commun, 9, 2018
6AMA
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BU of 6ama by Molmil
Structure of S. coelicolor/S. venezuelae BldC-smeA-ssfA complex to 3.09 Angstrom
分子名称: DNA (99-MER), Putative DNA-binding protein
著者Schumacher, M.A.
登録日2017-08-09
公開日2018-03-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献The MerR-like protein BldC binds DNA direct repeats as cooperative multimers to regulate Streptomyces development.
Nat Commun, 9, 2018
8CSH
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BU of 8csh by Molmil
Structure of the DNA binding domain of pSK1 Par partition protein bound to centromere DNA
分子名称: DNA (5'-D(*TP*AP*GP*TP*TP*AP*GP*GP*TP*AP*CP*CP*TP*AP*AP*CP*A)-3'), DNA (5'-D(P*TP*GP*TP*TP*AP*GP*GP*TP*AP*CP*CP*TP*AP*AP*C)-3'), Par
著者Schumacher, M.A.
登録日2022-05-12
公開日2022-08-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Molecular Analysis of pSK1 par: A Novel Plasmid Partitioning System Encoded by Staphylococcal Multiresistance Plasmids.
J.Mol.Biol., 434, 2022
8DPK
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BU of 8dpk by Molmil
structure of T. brucei RESC5
分子名称: RESC5
著者Schumacher, M.A, Salinas, R, Cannistraci, E.
登録日2022-07-15
公開日2023-02-22
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structure of the T. brucei kinetoplastid RNA editing substrate-binding complex core component, RESC5.
Plos One, 18, 2023
2PUD
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BU of 2pud by Molmil
CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
分子名称: DNA (5'-D(*TP*AP*CP*GP*CP*AP*AP*AP*CP*GP*TP*TP*TP*GP*CP*GP*T )-3'), HYPOXANTHINE, PROTEIN (PURINE REPRESSOR)
著者Schumacher, M.A, Choi, K.Y, Zalkin, H, Brennan, R.G.
登録日1997-10-04
公開日1998-05-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of LacI member, PurR, bound to DNA: minor groove binding by alpha helices.
Science, 266, 1994
2PUC
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CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
分子名称: DNA (5'-D(*TP*AP*CP*GP*CP*AP*AP*AP*CP*GP*TP*TP*TP*GP*CP*GP*T )-3'), GUANINE, PROTEIN (PURINE REPRESSOR)
著者Schumacher, M.A, Choi, K.Y, Zalkin, H, Brennan, R.G.
登録日1997-10-04
公開日1998-05-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of LacI member, PurR, bound to DNA: minor groove binding by alpha helices.
Science, 266, 1994
1WET
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BU of 1wet by Molmil
STRUCTURE OF THE PURR-GUANINE-PURF OPERATOR COMPLEX
分子名称: DNA (5'-D(*AP*AP*CP*GP*AP*AP*AP*AP*CP*GP*TP*TP*TP*TP*CP*GP*T )-3'), GUANINE, PROTEIN (PURINE REPRESSOR)
著者Schumacher, M.A, Glasfeld, A, Zalkin, H, Brennan, R.G.
登録日1997-04-27
公開日1997-11-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The X-ray structure of the PurR-guanine-purF operator complex reveals the contributions of complementary electrostatic surfaces and a water-mediated hydrogen bond to corepressor specificity and binding affinity.
J.Biol.Chem., 272, 1997
6P5R
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Structure of T. brucei MERS1-GDP complex
分子名称: GUANOSINE-5'-DIPHOSPHATE, Mitochondrial edited mRNA stability factor 1
著者Schumacher, M.A.
登録日2019-05-30
公開日2019-11-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structures of MERS1, the 5' processing enzyme of mitochondrial mRNAs inTrypanosoma brucei.
Rna, 26, 2020
6PFJ
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BU of 6pfj by Molmil
Structure of S. venezuelae RsiG-WhiG-(ci-di-GMP) complex, P64 crystal form
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), AmfC protein, RNA polymerase sigma factor
著者Schumacher, M.A.
登録日2019-06-21
公開日2019-11-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献c-di-GMP Arms an Anti-sigma to Control Progression of Multicellular Differentiation in Streptomyces.
Mol.Cell, 77, 2020
1DBQ
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BU of 1dbq by Molmil
DNA-BINDING REGULATORY PROTEIN
分子名称: MAGNESIUM ION, PURINE REPRESSOR
著者Schumacher, M.A, Choi, K.Y, Lu, F, Zalkin, H, Brennan, R.G.
登録日1996-02-13
公開日1996-12-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mechanism of corepressor-mediated specific DNA binding by the purine repressor.
Cell(Cambridge,Mass.), 83, 1995
6PFV
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Structure of S. venezuelae RisG-WhiG-c-di-GMP complex: orthorhombic crystal form
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), AmfC protein, RNA polymerase sigma factor
著者Schumacher, M.A.
登録日2019-06-22
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献c-di-GMP Arms an Anti-sigma to Control Progression of Multicellular Differentiation in Streptomyces.
Mol.Cell, 77, 2020
5E1L
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BU of 5e1l by Molmil
Structural and functional analysis of the E. coli FtsZ interacting protein, ZapC, reveals insight into molecular properties of a novel Z ring stabilizing protein
分子名称: Cell division protein ZapC
著者Schumacher, M.A, Huang, K.-H, Tchorzewski, L, Zeng, W, Janakiraman, A.
登録日2015-09-29
公開日2015-12-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural and Functional Analyses Reveal Insights into the Molecular Properties of the Escherichia coli Z Ring Stabilizing Protein, ZapC.
J.Biol.Chem., 291, 2016
6NJQ
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BU of 6njq by Molmil
Structure of TBP-Hoogsteen containing DNA complex
分子名称: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*CP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*GP*TP*TP*TP*AP*TP*AP*GP*C)-3'), TATA-box-binding protein 1
著者Schumacher, M.A, Stelling, A.
登録日2019-01-04
公開日2019-10-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Infrared Spectroscopic Observation of a G-C+Hoogsteen Base Pair in the DNA:TATA-Box Binding Protein Complex Under Solution Conditions.
Angew.Chem.Int.Ed.Engl., 58, 2019
6NON
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BU of 6non by Molmil
Structure of Cyanthece apo McdA
分子名称: ADENOSINE-5'-DIPHOSPHATE, Cobyrinic acid ac-diamide synthase, MAGNESIUM ION
著者Schumacher, M.A.
登録日2019-01-16
公開日2019-04-24
最終更新日2019-06-26
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Structures of maintenance of carboxysome distribution Walker-box McdA and McdB adaptor homologs.
Nucleic Acids Res., 47, 2019
6NOY
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BU of 6noy by Molmil
Structure of Cyanothece McdB
分子名称: Maintenance of carboxysome positioning B protein, Mcsb
著者Schumacher, M.A.
登録日2019-01-16
公開日2019-04-24
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.46 Å)
主引用文献Structures of maintenance of carboxysome distribution Walker-box McdA and McdB adaptor homologs.
Nucleic Acids Res., 47, 2019
6NOP
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BU of 6nop by Molmil
Structure of Cyanothece McdA(D38A)-ATP complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cobyrinic acid ac-diamide synthase, MAGNESIUM ION
著者Schumacher, M.A.
登録日2019-01-16
公開日2019-04-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structures of maintenance of carboxysome distribution Walker-box McdA and McdB adaptor homologs.
Nucleic Acids Res., 47, 2019
6NOO
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Structure of Cyanothece McdA-AMPPNP complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Maintenance of carboxysome positioning A protein, ...
著者Schumacher, M.A.
登録日2019-01-16
公開日2019-04-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of maintenance of carboxysome distribution Walker-box McdA and McdB adaptor homologs.
Nucleic Acids Res., 47, 2019
6NL1
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Structure of T. brucei MERS1 protein in its apo form
分子名称: Mitochondrial edited mRNA stability factor 1, SULFATE ION
著者Schumacher, M.A.
登録日2019-01-07
公開日2019-11-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.297 Å)
主引用文献Structures of MERS1, the 5' processing enzyme of mitochondrial mRNAs inTrypanosoma brucei.
Rna, 26, 2020
6UEP
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BU of 6uep by Molmil
Structure of A. thaliana TBP bound to a DNA site with a C-C mismatch
分子名称: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*CP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*CP*TP*TP*TP*AP*TP*AP*GP*C)-3'), FORMIC ACID, ...
著者Schumacher, M.A, Al-hashimi, H.
登録日2019-09-22
公開日2020-09-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献DNA mismatches reveal conformational penalties in protein-DNA recognition.
Nature, 587, 2020
6UEO
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Structure of A. thaliana TBP-AC mismatch DNA site
分子名称: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*CP*TP*TP*TP*AP*TP*AP*GP*C)-3'), TATA-box-binding protein 1
著者Schumacher, M.A.
登録日2019-09-22
公開日2020-09-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献DNA mismatches reveal conformational penalties in protein-DNA recognition.
Nature, 587, 2020
6UER
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BU of 6uer by Molmil
Crystal form 2: Structure of TBP bound to C-C mismatch at pH 7
分子名称: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*CP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*CP*TP*TP*TP*AP*TP*AP*GP*C)-3'), TATA-box-binding protein 1
著者Schumacher, M.A, Al-Hashimi, H.
登録日2019-09-22
公開日2020-09-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献DNA mismatches reveal conformational penalties in protein-DNA recognition.
Nature, 587, 2020
6UEQ
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Structure of TBP bound to C-C mismatch containing TATA site
分子名称: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*CP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*C)-3'), SULFATE ION, ...
著者Schumacher, M.A, Al-Hashimi, H.
登録日2019-09-22
公開日2020-09-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献DNA mismatches reveal conformational penalties in protein-DNA recognition.
Nature, 587, 2020

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件を2024-11-06に公開中

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