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PDB: 257 results

4PQL
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BU of 4pql by Molmil
N-Terminal domain of DNA binding protein
Descriptor: 1,2-ETHANEDIOL, Truncated replication protein RepA
Authors:Schumacher, M.A, Chinnam, N, Tonthat, N.K.
Deposit date:2014-03-03
Release date:2014-06-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.444 Å)
Cite:Mechanism of staphylococcal multiresistance plasmid replication origin assembly by the RepA protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
4PT7
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BU of 4pt7 by Molmil
Structure of initiator
Descriptor: Replication initiator A family protein, SULFATE ION
Authors:Schumacher, M.A.
Deposit date:2014-03-10
Release date:2014-06-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Mechanism of staphylococcal multiresistance plasmid replication origin assembly by the RepA protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
4PTA
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BU of 4pta by Molmil
Structure of MDR initiator
Descriptor: Replication initiator protein
Authors:Schumacher, M.A.
Deposit date:2014-03-10
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6003 Å)
Cite:Mechanism of staphylococcal multiresistance plasmid replication origin assembly by the RepA protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
4PQK
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BU of 4pqk by Molmil
C-Terminal domain of DNA binding protein
Descriptor: Maltose ABC transporter periplasmic protein, Truncated replication protein RepA, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Schumacher, M.A, Chinnam, N, Tonthat, N.K.
Deposit date:2014-03-03
Release date:2014-06-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.401 Å)
Cite:Mechanism of staphylococcal multiresistance plasmid replication origin assembly by the RepA protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
4R4E
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BU of 4r4e by Molmil
Structure of GlnR-DNA complex
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, DNA (5'-D(*AP*TP*TP*CP*TP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*AP*GP*TP*A)-3'), ...
Authors:Schumacher, M.A.
Deposit date:2014-08-19
Release date:2015-03-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
4R22
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BU of 4r22 by Molmil
TnrA-DNA complex
Descriptor: DNA (5'-D(*CP*GP*TP*GP*TP*AP*AP*GP*GP*AP*AP*TP*TP*CP*TP*GP*AP*CP*AP*CP*G)-3'), HTH-type transcriptional regulator TnrA
Authors:Schumacher, M.A.
Deposit date:2014-08-08
Release date:2015-03-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
4R24
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BU of 4r24 by Molmil
Complete dissection of B. subtilis nitrogen homeostatic circuitry
Descriptor: DNA (5'-D(*CP*GP*TP*GP*TP*AP*AP*GP*GP*AP*AP*TP*TP*CP*TP*GP*AP*CP*AP*CP*G)-3'), HTH-type transcriptional regulator TnrA
Authors:Schumacher, M.A.
Deposit date:2014-08-08
Release date:2015-03-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
4R25
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BU of 4r25 by Molmil
Structure of B. subtilis GlnK
Descriptor: Nitrogen regulatory PII-like protein, ZINC ION
Authors:Schumacher, M.A.
Deposit date:2014-08-08
Release date:2015-03-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5193 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
7RMW
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BU of 7rmw by Molmil
Crystal structure of B. subtilis PurR bound to ppGpp
Descriptor: GUANOSINE-5',3'-TETRAPHOSPHATE, Pur operon repressor
Authors:Schumacher, M.A.
Deposit date:2021-07-28
Release date:2021-12-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The nucleotide messenger (p)ppGpp is an anti-inducer of the purine synthesis transcription regulator PurR in Bacillus.
Nucleic Acids Res., 50, 2022
4RX6
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BU of 4rx6 by Molmil
Structure of B. subtilis GlnK-ATP complex to 2.6 Angstrom
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Nitrogen regulatory PII-like protein
Authors:Schumacher, M.A, Cuthbert, B, Tonthat, N, Chinnam, N.G, Whitfill, T.
Deposit date:2014-12-09
Release date:2015-12-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5994 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
4RS7
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BU of 4rs7 by Molmil
Structure of pNOB8 ParB-C
Descriptor: ParB-C
Authors:Schumacher, M.A, Lee, J, Chinnam, N.B, Barilla, D.
Deposit date:2014-11-07
Release date:2015-09-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.
Science, 349, 2015
4S0R
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BU of 4s0r by Molmil
Structure of GS-TnrA complex
Descriptor: GLUTAMINE, Glutamine synthetase, MAGNESIUM ION, ...
Authors:Schumacher, M.A, Chinnam, N.G, Cuthbert, B, Tonthat, N.K.
Deposit date:2015-01-04
Release date:2015-03-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
4RS8
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BU of 4rs8 by Molmil
Apo structure of novel pNOB8 plasmid centromere binding protein
Descriptor: AspA
Authors:Schumacher, M.A, Lee, J, Chinnam, N.B, Barilla, D.
Deposit date:2014-11-07
Release date:2015-09-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.
Science, 349, 2015
4YJ1
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BU of 4yj1 by Molmil
Crystal structure of T. brucei MRB1590-ADP bound to poly-U RNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Uncharacterized protein
Authors:Schumacher, M.A.
Deposit date:2015-03-03
Release date:2015-08-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structures of the T. brucei kRNA editing factor MRB1590 reveal unique RNA-binding pore motif contained within an ABC-ATPase fold.
Nucleic Acids Res., 43, 2015
2NTZ
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BU of 2ntz by Molmil
Structure of a ParB-DNA complex reveals a double B-box interaction
Descriptor: 5'-D(*CP*GP*TP*GP*AP*AP*AP*TP*CP*GP*CP*CP*AP*CP*GP*A)-3', 5'-D(*TP*CP*GP*TP*GP*GP*CP*GP*AP*TP*TP*TP*CP*AP*CP*G)-3', ParB
Authors:Schumacher, M.A, Mansoor, A, Funnell, B.E.
Deposit date:2006-11-08
Release date:2007-02-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Structure of a four-way bridged ParB-DNA complex provides insight into P1 segrosome assembly.
J.Biol.Chem., 282, 2007
2NZV
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BU of 2nzv by Molmil
Structural mechanism for the fine-tuning of CcpA function by the small molecule effectors G6P and FBP
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, Catabolite control protein, Phosphocarrier protein HPr, ...
Authors:Schumacher, M.A, Hillen, W, Brennan, R.G.
Deposit date:2006-11-25
Release date:2007-05-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Mechanism for the Fine-tuning of CcpA Function by The Small Molecule Effectors Glucose 6-Phosphate and Fructose 1,6-Bisphosphate.
J.Mol.Biol., 368, 2007
2NZU
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BU of 2nzu by Molmil
Structural mechanism for the fine-tuning of CcpA function by the small molecule effectors G6P and FBP
Descriptor: 6-O-phosphono-beta-D-glucopyranose, Catabolite control protein, Phosphocarrier protein HPr, ...
Authors:Schumacher, M.A, Hillen, W, Brennan, R.G.
Deposit date:2006-11-25
Release date:2007-05-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Mechanism for the Fine-tuning of CcpA Function by The Small Molecule Effectors Glucose 6-Phosphate and Fructose 1,6-Bisphosphate.
J.Mol.Biol., 368, 2007
2OEN
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BU of 2oen by Molmil
Structural mechanism for the fine-tuning of CcpA function by the small molecule effectors glucose-6-phosphate and fructose-1,6-bisphosphate
Descriptor: Catabolite control protein, Phosphocarrier protein HPr
Authors:Schumacher, M.A, Seidel, G, Hillen, W, Brennan, R.G.
Deposit date:2006-12-30
Release date:2007-05-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Structural Mechanism for the Fine-tuning of CcpA Function by The Small Molecule Effectors Glucose 6-Phosphate and Fructose 1,6-Bisphosphate.
J.Mol.Biol., 368, 2007
3TPE
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BU of 3tpe by Molmil
The phipa p3121 structure
Descriptor: Serine/threonine-protein kinase HipA
Authors:Schumacher, M.A, Link, T, Brennan, R.G.
Deposit date:2011-09-07
Release date:2012-10-03
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Role of Unusual P Loop Ejection and Autophosphorylation in HipA-Mediated Persistence and Multidrug Tolerance.
Cell Rep, 2, 2012
3TPV
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BU of 3tpv by Molmil
Structure of pHipA bound to ADP
Descriptor: ADENINE, SULFATE ION, Serine/threonine-protein kinase HipA
Authors:Schumacher, M.A, Link, T.M, Brennan, R.G.
Deposit date:2011-09-08
Release date:2012-10-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Role of Unusual P Loop Ejection and Autophosphorylation in HipA-Mediated Persistence and Multidrug Tolerance.
Cell Rep, 2, 2012
7LQ2
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BU of 7lq2 by Molmil
Apo Rr RsiG- crystal form 1
Descriptor: ISOPROPYL ALCOHOL, MAGNESIUM ION, RR RsiG
Authors:Schumacher, M.A, Brennan, R.G.
Deposit date:2021-02-12
Release date:2021-07-14
Last modified:2021-08-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Evolution of a sigma-(c-di-GMP)-anti-sigma switch.
Proc.Natl.Acad.Sci.USA, 118, 2021
7LQ4
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BU of 7lq4 by Molmil
Rr (RsiG)2-(c-di-GMP)2-WhiG complex
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), RsiG, WhiG
Authors:Schumacher, M.A, Brennan, R.G.
Deposit date:2021-02-12
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Evolution of a sigma-(c-di-GMP)-anti-sigma switch.
Proc.Natl.Acad.Sci.USA, 118, 2021
7LQ3
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BU of 7lq3 by Molmil
Evolution of a sigma-(c-di-GMP)-antisigma switch
Descriptor: MAGNESIUM ION, RsiG, SULFATE ION
Authors:Schumacher, M.A, Brennan, R.G.
Deposit date:2021-02-12
Release date:2021-07-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Evolution of a sigma-(c-di-GMP)-anti-sigma switch.
Proc.Natl.Acad.Sci.USA, 118, 2021
8SUK
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BU of 8suk by Molmil
Structure of Rhodococcus sp. USK13 DarR-c-di-AMP complex
Descriptor: DNA (5'-D(*AP*A)-3'), DarR, SULFATE ION
Authors:Schumacher, M.A.
Deposit date:2023-05-12
Release date:2023-11-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structures of the DarR transcription regulator reveal unique modes of second messenger and DNA binding.
Nat Commun, 14, 2023
8T5Y
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BU of 8t5y by Molmil
Structure of Rhodococcus sp. USK13 DarR(K44A)-cAMP complex
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DarR
Authors:Schumacher, M.A.
Deposit date:2023-06-14
Release date:2023-11-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Structures of the DarR transcription regulator reveal unique modes of second messenger and DNA binding.
Nat Commun, 14, 2023

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PDB entries from 2024-11-06

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