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PDB: 250 results

2YB7
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CBM62 in complex with 6-alpha-D-Galactosyl-mannotriose
Descriptor: CALCIUM ION, CARBOHYDRATE BINDING FAMILY 6, GLYCEROL, ...
Authors:Montanier, C.Y, Correia, M.A.S, Flint, J.E, Zhu, Y, McKee, L.S, Prates, J.A.M, Polizzi, S.J, Coutinho, P.M, Henrissat, B, Fontes, C.M.G.A, Gilbert, H.J.
Deposit date:2011-03-02
Release date:2011-08-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Novel, Noncatalytic Carbohydrate-Binding Module Displays Specificity for Galactose-Containing Polysaccharides Through Calcium-Mediated Oligomerization.
J.Biol.Chem., 286, 2011
2Y8K
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BU of 2y8k by Molmil
Structure of CtGH5-CBM6, an arabinoxylan-specific xylanase.
Descriptor: CALCIUM ION, CARBOHYDRATE BINDING FAMILY 6, GLYCEROL, ...
Authors:Firbank, S.J, Correia, M.A, Mazumder, K, Bras, J.L, Zhu, Y, Lewis, R.J, York, W.S, Fontes, C.M, Gilbert, H.J.
Deposit date:2011-02-07
Release date:2011-02-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structure and Function of an Arabinoxylan-Specific Xylanase.
J.Biol.Chem., 286, 2011
8H77
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BU of 8h77 by Molmil
Hsp90-AhR-p23-XAP2 complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, AH receptor-interacting protein, Aryl hydrocarbon receptor, ...
Authors:Wen, Z.L, Zhai, Y.J, Zhu, Y, Sun, F.
Deposit date:2022-10-19
Release date:2023-01-04
Last modified:2023-03-22
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of the cytosolic AhR complex.
Structure, 31, 2023
2YFU
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BU of 2yfu by Molmil
CBM62 FROM CLOSTRIDIUM THERMOCELLUM XYL5A
Descriptor: CALCIUM ION, CARBOHYDRATE BINDING FAMILY 6, GLYCEROL
Authors:Montanier, C.Y, Correia, M.A.S, Flint, J.E, Zhu, Y, Basle, A, Mckee, L.S, Prates, J.A.M, Polizzi, S.J, Coutinho, P.M, Henrissat, B, Fontes, C.M.G.A, Gilbert, H.J.
Deposit date:2011-04-08
Release date:2011-05-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A Novel, Noncatalytic Carbohydrate-Binding Module Displays Specificity for Galactose-Containing Polysaccharides Through Calcium-Mediated Oligomerization.
J.Biol.Chem., 286, 2011
3VNJ
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BU of 3vnj by Molmil
Crystal structures of D-Psicose 3-epimerase with D-psicose from Clostridium cellulolyticum H10
Descriptor: D-psicose, MANGANESE (II) ION, Xylose isomerase domain protein TIM barrel
Authors:Chan, H.C, Zhu, Y, Hu, Y, Ko, T.P, Huang, C.H, Ren, F, Chen, C.C, Guo, R.T, Sun, Y.
Deposit date:2012-01-16
Release date:2012-08-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Crystal structures of D-psicose 3-epimerase from Clostridium cellulolyticum H10 and its complex with ketohexose sugars.
Protein Cell, 3, 2012
3VNM
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BU of 3vnm by Molmil
Crystal structures of D-Psicose 3-epimerase with D-sorbose from Clostridium cellulolyticum H10
Descriptor: D-sorbose, MANGANESE (II) ION, Xylose isomerase domain protein TIM barrel
Authors:Chan, H.C, Zhu, Y, Hu, Y, Ko, T.P, Huang, C.H, Ren, F, Chen, C.C, Guo, R.T, Sun, Y.
Deposit date:2012-01-17
Release date:2012-08-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal structures of D-psicose 3-epimerase from Clostridium cellulolyticum H10 and its complex with ketohexose sugars.
Protein Cell, 3, 2012
3VNL
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BU of 3vnl by Molmil
Crystal structures of D-Psicose 3-epimerase with D-tagatose from Clostridium cellulolyticum H10
Descriptor: D-tagatose, MANGANESE (II) ION, Xylose isomerase domain protein TIM barrel
Authors:Chan, H.C, Zhu, Y, Hu, Y, Ko, T.P, Huang, C.H, Ren, F, Chen, C.C, Guo, R.T, Sun, Y.
Deposit date:2012-01-16
Release date:2012-08-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures of D-psicose 3-epimerase from Clostridium cellulolyticum H10 and its complex with ketohexose sugars.
Protein Cell, 3, 2012
3VNK
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BU of 3vnk by Molmil
Crystal structures of D-Psicose 3-epimerase with D-fructose from Clostridium cellulolyticum H10
Descriptor: D-fructose, MANGANESE (II) ION, Xylose isomerase domain protein TIM barrel
Authors:Chan, H.C, Zhu, Y, Hu, Y, Ko, T.P, Huang, C.H, Ren, F, Chen, C.C, Guo, R.T, Sun, Y.
Deposit date:2012-01-16
Release date:2012-08-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structures of D-psicose 3-epimerase from Clostridium cellulolyticum H10 and its complex with ketohexose sugars.
Protein Cell, 3, 2012
4QXF
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BU of 4qxf by Molmil
crystal structure of human LGR4 and Rspo1
Descriptor: Leucine-rich repeat-containing G-protein coupled receptor 4, Variable lymphocyte receptor B, R-spondin-1
Authors:Xu, J.G, Huang, C, Zhou, Y, Zhu, Y.
Deposit date:2014-07-20
Release date:2014-10-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:crystal structure of human LGR4 and Rspo1
TO BE PUBLISHED
3VNI
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BU of 3vni by Molmil
Crystal structures of D-Psicose 3-epimerase from Clostridium cellulolyticum H10 and its complex with ketohexose sugars
Descriptor: MANGANESE (II) ION, Xylose isomerase domain protein TIM barrel
Authors:Chan, H.C, Zhu, Y, Hu, Y, Ko, T.P, Huang, C.H, Ren, F, Chen, C.C, Guo, R.T, Sun, Y.
Deposit date:2012-01-16
Release date:2012-08-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structures of D-psicose 3-epimerase from Clostridium cellulolyticum H10 and its complex with ketohexose sugars.
Protein Cell, 3, 2012
6AEB
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BU of 6aeb by Molmil
Crystal structure of xCas9 in complex with sgRNA and target DNA (AAG PAM)
Descriptor: DNA (25-MER), DNA (5'-D(*AP*AP*AP*AP*AP*GP*TP*AP*TP*TP*G)-3'), DNA Nuclease, ...
Authors:Guo, M, Ren, K, Zhu, Y, Huang, Z.
Deposit date:2018-08-04
Release date:2019-03-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.004 Å)
Cite:Structural insights into a high fidelity variant of SpCas9.
Cell Res., 29, 2019
4QXE
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BU of 4qxe by Molmil
Crystal structure of LGR4 fused with hagfish VLR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ...
Authors:Xu, J.G, Huang, C, Zhu, Y.
Deposit date:2014-07-20
Release date:2014-10-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of LGR4 fused with hagfish VLR
TO BE PUBLISHED
4RO1
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BU of 4ro1 by Molmil
An 3'-5'-exoribonuclease that specifically recognizes RNAs.
Descriptor: DIS3-like exonuclease 2
Authors:Lv, H, Zhu, Y, Teng, M.
Deposit date:2014-10-27
Release date:2015-06-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.803 Å)
Cite:Structural analysis of Dis3l2, an exosome-independent exonuclease from Schizosaccharomyces pombe.
Acta Crystallogr.,Sect.D, 71, 2015
5WYB
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BU of 5wyb by Molmil
Structure of Pseudomonas aeruginosa DspI
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, ACETATE ION, Probable enoyl-CoA hydratase/isomerase
Authors:Liu, L, Peng, C, Li, T, Li, C, He, L, Song, Y, Zhu, Y, Shen, Y, Bao, R.
Deposit date:2017-01-12
Release date:2018-01-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural and functional studies on Pseudomonas aeruginosa DspI: implications for its role in DSF biosynthesis.
Sci Rep, 8, 2018
4JW1
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BU of 4jw1 by Molmil
Crystal structure of N-terminal 618-residue fragment of LepB from Legionella pneumophila
Descriptor: CITRATE ANION, Effector protein B, GLYCEROL
Authors:Hu, L, Yao, Q, Zhu, Y, Shao, F.
Deposit date:2013-03-26
Release date:2013-05-08
Last modified:2013-08-14
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:Structural analyses of Legionella LepB reveal a new GAP fold that catalytically mimics eukaryotic RasGAP
Cell Res., 23, 2013
4MBS
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BU of 4mbs by Molmil
Crystal Structure of the CCR5 Chemokine Receptor
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 4,4-difluoro-N-[(1S)-3-{(3-exo)-3-[3-methyl-5-(propan-2-yl)-4H-1,2,4-triazol-4-yl]-8-azabicyclo[3.2.1]oct-8-yl}-1-phenylpropyl]cyclohexanecarboxamide, Chimera protein of C-C chemokine receptor type 5 and Rubredoxin, ...
Authors:Tan, Q, Zhu, Y, Han, G.W, Li, J, Fenalti, G, Liu, H, Cherezov, V, Stevens, R.C, GPCR Network (GPCR), Zhao, Q, Wu, B.
Deposit date:2013-08-19
Release date:2013-09-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structure of the CCR5 chemokine receptor-HIV entry inhibitor maraviroc complex.
Science, 341, 2013
6VQV
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BU of 6vqv by Molmil
Type I-F CRISPR-Csy complex with its inhibitor AcrF9
Descriptor: AcrF9, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
Authors:Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
Deposit date:2020-02-06
Release date:2020-03-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VQX
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BU of 6vqx by Molmil
Type I-F CRISPR-Csy complex with its inhibitor AcrF6
Descriptor: AcrF6, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
Authors:Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
Deposit date:2020-02-06
Release date:2020-03-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VQW
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BU of 6vqw by Molmil
Type I-F CRISPR-Csy complex with its inhibitor AcrF8
Descriptor: AcrF8, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
Authors:Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
Deposit date:2020-02-06
Release date:2020-03-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 117, 2020
6NII
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BU of 6nii by Molmil
Crystal structure of RavD (residues 1-200) from Legionella pneumophila (strain Corby)
Descriptor: Uncharacterized protein RavD
Authors:Wang, X, Zhou, Y, Zhu, Y.
Deposit date:2018-12-28
Release date:2019-05-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A bacterial effector deubiquitinase specifically hydrolyses linear ubiquitin chains to inhibit host inflammatory signalling.
Nat Microbiol, 4, 2019
6NJD
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BU of 6njd by Molmil
Crystal structure of RavD (residues 1-200) from Legionella pneumophila (strain Corby) complexed with Met-1 linked di-ubiquitin
Descriptor: Di-ubiquitin, MAGNESIUM ION, RavD
Authors:Wang, X, Zhou, Y, Zhu, Y.
Deposit date:2019-01-03
Release date:2019-05-22
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:A bacterial effector deubiquitinase specifically hydrolyses linear ubiquitin chains to inhibit host inflammatory signalling.
Nat Microbiol, 4, 2019
2WYI
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BU of 2wyi by Molmil
Structure of the Streptococcus pyogenes family GH38 alpha-mannosidase complexed with swainsonine
Descriptor: 1S-8AB-OCTAHYDRO-INDOLIZIDINE-1A,2A,8B-TRIOL, 2-(2-METHOXYETHOXY)ETHANOL, ALPHA-MANNOSIDASE, ...
Authors:Suits, M.D.L, Zhu, Y, Taylor, E.J, Zechel, D.L, Gilbert, H.J, Davies, G.J.
Deposit date:2009-11-16
Release date:2010-02-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and Kinetic Investigation of Streptococcus Pyogenes Family Gh38 Alpha-Mannosidase
Plos One, 5, 2010
4IP3
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BU of 4ip3 by Molmil
Complex structure of OspI and Ubc13
Descriptor: ORF169b, Ubiquitin-conjugating enzyme E2 N
Authors:Fu, P, Jin, M, Zhang, X, Xu, L, Xia, Z, Zhu, Y.
Deposit date:2013-01-09
Release date:2013-03-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure Analysis of Ubc13 Inactivation
To be Published
2WYH
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BU of 2wyh by Molmil
Structure of the Streptococcus pyogenes family GH38 alpha-mannosidase
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ALPHA-MANNOSIDASE, GLYCEROL, ...
Authors:Suits, M.D.L, Zhu, Y, Taylor, E.J, Zechel, D.L, Gilbert, H.J, Davies, G.J.
Deposit date:2009-11-16
Release date:2010-02-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and Kinetic Investigation of Streptococcus Pyogenes Family Gh38 Alpha-Mannosidase
Plos One, 5, 2010
5WYD
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BU of 5wyd by Molmil
Structural of Pseudomonas aeruginosa DspI
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ISOPROPYL ALCOHOL, ...
Authors:Liu, L, Peng, C, Li, T, Li, C, He, L, Song, Y, Zhu, Y, Shen, Y, Bao, R.
Deposit date:2017-01-12
Release date:2018-01-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Structural and functional studies on Pseudomonas aeruginosa DspI: implications for its role in DSF biosynthesis.
Sci Rep, 8, 2018

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