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PDB: 334 results

3D3F
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BU of 3d3f by Molmil
Crystal Structure of Yvgn and cofactor NADPH from Bacillus subtilis
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, YvgN protein
Authors:Zhou, Y.F, Lei, J, Su, X.D.
Deposit date:2008-05-10
Release date:2009-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and biochemical analyses of YvgN and YtbE from Bacillus subtilis
Protein Sci., 18, 2009
6KHP
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BU of 6khp by Molmil
Crystal structure of Oryza sativa TDC with PLP and tryptamine
Descriptor: 2-(1H-INDOL-3-YL)ETHANAMINE, ACETATE ION, CALCIUM ION, ...
Authors:Zhou, Y.Z, Liao, L.J, Liu, X.K, Guo, Y, Zhao, Y.C, Zeng, Z.X.
Deposit date:2019-07-16
Release date:2020-07-15
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Crystal structure ofOryza sativaTDC reveals the substrate specificity for TDC-mediated melatonin biosynthesis.
J Adv Res, 24, 2020
5VKV
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BU of 5vkv by Molmil
Solution NMR structure of the membrane electron transporter CcdA
Descriptor: Cytochrome c-type biogenesis protein CcdA
Authors:Zhou, Y, Bushweller, J.H.
Deposit date:2017-04-24
Release date:2018-01-31
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure and elevator mechanism of the membrane electron transporter CcdA.
Nat. Struct. Mol. Biol., 25, 2018
6K5U
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BU of 6k5u by Molmil
Crystal structure of the myb domain of S. pombe Tbf1
Descriptor: Telomeric DNA-binding factor trf1
Authors:Zhou, Y.Z, Wang, N.N, Zhao, Y.C, Zeng, Z.X.
Deposit date:2019-05-31
Release date:2020-06-03
Method:X-RAY DIFFRACTION (2.079 Å)
Cite:Crystal structure of the myb domain of S. pombe Tbf1
To Be Published
7YRZ
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BU of 7yrz by Molmil
Crystal structure of HCoV 229E main protease in complex with PF07321332
Descriptor: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase
Authors:Zhou, Y.R, Zeng, P, Zhou, X.L, Lin, C, Zhang, J, Yin, X.S, Li, J.
Deposit date:2022-08-11
Release date:2023-08-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural basis of main proteases of HCoV-229E bound to inhibitor PF-07304814 and PF-07321332.
Biochem.Biophys.Res.Commun., 657, 2023
5GUJ
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BU of 5guj by Molmil
Crystal structure of the Bacillus subtilis DnaG RNA Polymerase Domain, natural degradation of full length DnaG
Descriptor: DNA primase
Authors:Zhou, Y, Liu, Z, Wang, G.
Deposit date:2016-08-29
Release date:2017-04-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insight into the Specific DNA Template Binding to DnaG primase in Bacteria
Sci Rep, 7, 2017
6KSW
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BU of 6ksw by Molmil
Cryo-EM structure of the human concentrative nucleoside transporter CNT3
Descriptor: Solute carrier family 28 member 3
Authors:Zhou, Y.X, Liao, L.H, Li, J.L, Xiao, Q.J, Sun, L.F, Deng, D.
Deposit date:2019-08-26
Release date:2020-08-26
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of the human concentrative nucleoside transporter CNT3.
Plos Biol., 18, 2020
7M42
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BU of 7m42 by Molmil
Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of neutralizing antibodies REGN10985 and REGN10989
Descriptor: REGN10985 antibody Fab fragment heavy chain, REGN10985 antibody Fab fragment light chain, REGN10989 antibody Fab fragment heavy chain, ...
Authors:Zhou, Y, Romero Hernandez, A, Saotome, K, Franklin, M.C.
Deposit date:2021-03-19
Release date:2021-07-28
Last modified:2021-08-25
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The monoclonal antibody combination REGEN-COV protects against SARS-CoV-2 mutational escape in preclinical and human studies.
Cell, 184, 2021
2ZBB
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BU of 2zbb by Molmil
P43 crystal of DctBp
Descriptor: C4-dicarboxylate transport sensor protein dctB, MALONIC ACID
Authors:Zhou, Y.F, Nan, B.Y, Liu, X, Nan, J, Liang, Y.H, Panjikar, S, Ma, Q.J, Wang, Y.P, Su, X.-D.
Deposit date:2007-10-18
Release date:2008-11-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:crystal structures of sensory histidine kinase DctBp
to be published
1R3J
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BU of 1r3j by Molmil
potassium channel KcsA-Fab complex in high concentration of Tl+
Descriptor: Antibody Fab fragment heavy chain, Antibody Fab fragment light chain, DIACYL GLYCEROL, ...
Authors:Zhou, Y, MacKinnon, R.
Deposit date:2003-10-02
Release date:2003-11-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The occupancy of ions in the K+ selectivity filter: Charge balance and coupling of ion binding to a protein conformational change underlie high conduction rates
J.Mol.Biol., 333, 2003
1R3L
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BU of 1r3l by Molmil
potassium channel KcsA-Fab complex in Cs+
Descriptor: Antibody Fab fragment heavy chain, Antibody Fab fragment light chain, CESIUM ION, ...
Authors:Zhou, Y, MacKinnon, R.
Deposit date:2003-10-02
Release date:2003-11-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:The occupancy of ions in the K+ selectivity filter: Charge balance and coupling of ion binding to a protein conformational change underlie high conduction rates
J.Mol.Biol., 333, 2003
1R3I
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BU of 1r3i by Molmil
potassium channel KcsA-Fab complex in Rb+
Descriptor: Antibody Fab fragment heavy chain, Antibody Fab fragment light chain, DIACYL GLYCEROL, ...
Authors:Zhou, Y, MacKinnon, R.
Deposit date:2003-10-02
Release date:2003-11-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The occupancy of ions in the K+ selectivity filter: Charge balance and coupling of ion binding to a protein conformational change underlie high conduction rates
J.Mol.Biol., 333, 2003
1R3K
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BU of 1r3k by Molmil
potassium channel KcsA-Fab complex in low concentration of Tl+
Descriptor: Antibody Fab fragment heavy chain, Antibody Fab fragment light chain, DIACYL GLYCEROL, ...
Authors:Zhou, Y, MacKinnon, R.
Deposit date:2003-10-02
Release date:2003-11-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The occupancy of ions in the K+ selectivity filter: Charge balance and coupling of ion binding to a protein conformational change underlie high conduction rates
J.Mol.Biol., 333, 2003
3E4O
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BU of 3e4o by Molmil
Crystal structure of succinate bound state DctB
Descriptor: C4-dicarboxylate transport sensor protein dctB, MAGNESIUM ION, SUCCINIC ACID
Authors:Zhou, Y.F, Nan, J, Nan, B.Y, Liang, Y.H, Panjikar, S, Su, X.D.
Deposit date:2008-08-12
Release date:2008-10-21
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:C4-dicarboxylates sensing mechanism revealed by the crystal structures of DctB sensor domain.
J.Mol.Biol., 383, 2008
3E4P
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BU of 3e4p by Molmil
Crystal structure of malonate occupied DctB
Descriptor: C4-dicarboxylate transport sensor protein dctB, MALONIC ACID, STRONTIUM ION
Authors:Zhou, Y.F, Nan, J, Nan, B.Y, Liang, Y.H, Panjikar, S, Su, X.D.
Deposit date:2008-08-12
Release date:2008-10-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:C4-dicarboxylates sensing mechanism revealed by the crystal structures of DctB sensor domain.
J.Mol.Biol., 383, 2008
3E4Q
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BU of 3e4q by Molmil
Crystal structure of apo DctB
Descriptor: C4-dicarboxylate transport sensor protein dctB, CALCIUM ION
Authors:Zhou, Y.F, Nan, J, Nan, B.Y, Liang, Y.H, Panjikar, S, Su, X.D.
Deposit date:2008-08-12
Release date:2008-10-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:C4-dicarboxylates sensing mechanism revealed by the crystal structures of DctB sensor domain.
J.Mol.Biol., 383, 2008
3B3D
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BU of 3b3d by Molmil
B.subtilis YtbE
Descriptor: CALCIUM ION, Putative morphine dehydrogenase
Authors:Zhou, Y.F, Li, L.F, Liang, Y.H, Su, X.-D.
Deposit date:2007-10-20
Release date:2008-10-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and biochemical analyses of YvgN and YtbE from Bacillus subtilis
Protein Sci., 18, 2009
6UI4
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BU of 6ui4 by Molmil
Crystal structure of phenamacril-bound F. graminearum myosin I
Descriptor: Calmodulin, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Zhou, Y, Zhou, X.E, Gong, Y, Zhu, Y, Xu, H.E, Zhou, M, Melcher, K, Zhang, F.
Deposit date:2019-09-30
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis of Fusarium myosin I inhibition by phenamacril.
Plos Pathog., 16, 2020
3GAD
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BU of 3gad by Molmil
Structure of apomif
Descriptor: ACETIC ACID, Macrophage migration inhibitory factor-like protein, SULFATE ION
Authors:Zhou, Y.-F, Su, X.-D, Shao, D, Wang, H.
Deposit date:2009-02-17
Release date:2009-12-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional comparison of MIF ortholog from Plasmodium yoelii with MIF from its rodent host
Mol.Immunol., 47, 2010
3GAC
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BU of 3gac by Molmil
Structure of mif with HPP
Descriptor: 3-(4-HYDROXY-PHENYL)PYRUVIC ACID, ACETIC ACID, Macrophage migration inhibitory factor-like protein, ...
Authors:Zhou, Y.-F, Su, X.-D, Shao, D, Wang, H.
Deposit date:2009-02-17
Release date:2009-12-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional comparison of MIF ortholog from Plasmodium yoelii with MIF from its rodent host
Mol.Immunol., 47, 2010
3F7J
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BU of 3f7j by Molmil
B.subtilis YvgN
Descriptor: NITRATE ION, POTASSIUM ION, YvgN protein
Authors:Zhou, Y.F, Lei, J, Liang, Y.H, Su, X.-D.
Deposit date:2008-11-09
Release date:2008-11-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and biochemical analyses of YvgN and YtbE from Bacillus subtilis
Protein Sci., 18, 2009
3O19
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BU of 3o19 by Molmil
Structure-function analysis of human L-Prostaglandin D Synthase bound with fatty acid
Descriptor: OLEIC ACID, PALMITIC ACID, Prostaglandin-H2 D-isomerase
Authors:Zhou, Y, Shaw, N, Li, Y, Zhao, Y, Zhang, R, Liu, Z.-J.
Deposit date:2010-07-21
Release date:2010-09-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structure-function analysis of human L-Prostaglandin D Synthase bound with fatty acid
To be Published
3O2Y
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BU of 3o2y by Molmil
Structure-function analysis of human L-Prostaglandin D Synthase bound with fatty acid
Descriptor: GLYCEROL, OLEIC ACID, PALMITIC ACID, ...
Authors:Zhou, Y, Shaw, N, Li, Y, Zhao, Y, Zhang, R, Liu, Z.-J.
Deposit date:2010-07-23
Release date:2010-09-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-function analysis of human L-Prostaglandin D Synthase bound with fatty acid
To be Published
3O22
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BU of 3o22 by Molmil
Structure-function analysis of human L-Prostaglandin D Synthase bound with fatty acid
Descriptor: OLEIC ACID, PALMITIC ACID, Prostaglandin-H2 D-isomerase
Authors:Zhou, Y, Shaw, N, Li, Y, Zhao, Y, Zhang, R, Liu, Z.-J.
Deposit date:2010-07-22
Release date:2010-09-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-function analysis of human L-Prostaglandin D Synthase bound with fatty acid
To be Published
6LUI
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BU of 6lui by Molmil
Crystal structure of the SAMD1 WH domain and DNA complex
Descriptor: Atherin, DNA (5'-D(*AP*CP*CP*TP*GP*CP*GP*CP*AP*CP*CP*AP*T)-3'), DNA (5'-D(*AP*TP*GP*GP*TP*GP*CP*GP*CP*AP*GP*GP*T)-3')
Authors:Zhou, Y, Cao, Y, Wang, Z.
Deposit date:2020-01-29
Release date:2021-02-03
Last modified:2021-07-07
Method:X-RAY DIFFRACTION (1.781 Å)
Cite:The SAM domain-containing protein 1 (SAMD1) acts as a repressive chromatin regulator at unmethylated CpG islands.
Sci Adv, 7, 2021

224004

數據於2024-08-21公開中

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