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PDB: 1640 件
2GHQ
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BU of 2ghq by Molmil
CTD-specific phosphatase Scp1 in complex with peptide C-terminal domain of RNA polymerase II
分子名称: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, DNA-directed RNA polymerase II largest subunit, MAGNESIUM ION
著者Zhang, Y, Noel, J.P.
登録日2006-03-27
公開日2006-12-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Determinants for dephosphorylation of the RNA polymerase II C-terminal domain by Scp1.
Mol.Cell, 24, 2006
2GHT
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BU of 2ght by Molmil
CTD-specific phosphatase Scp1 in complex with peptide from C-terminal domain of RNA polymerase II
分子名称: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, DNA-directed RNA polymerase II largest subunit, MAGNESIUM ION
著者Zhang, Y, Noel, J.P.
登録日2006-03-27
公開日2006-12-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Determinants for dephosphorylation of the RNA polymerase II C-terminal domain by Scp1.
Mol.Cell, 24, 2006
2N78
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BU of 2n78 by Molmil
NMR structure of IF1 from Pseudomonas aeruginosa
分子名称: Translation initiation factor IF-1
著者Zhang, Y.
登録日2015-09-04
公開日2016-09-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献(1)H, (13)C and (15)N resonance assignments and secondary structure analysis of translation initiation factor 1 from Pseudomonas aeruginosa.
Biomol.Nmr Assign., 10, 2016
2MN6
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BU of 2mn6 by Molmil
Solution structure of dimeric TatA of twin-arginine translocation system from E. coli
分子名称: Sec-independent protein translocase protein TatA
著者Zhang, Y, Hu, Y, Jin, C.
登録日2014-03-31
公開日2015-04-15
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for TatA oligomerization: an NMR study of Escherichia coli TatA dimeric structure
Plos One, 9, 2014
5T0X
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BU of 5t0x by Molmil
Solution NMR-derived structure of calmodulin bound with ER alpha peptides
分子名称: CALCIUM ION, Calmodulin, Estrogen receptor peptide
著者Zhang, Y, Ames, J.B.
登録日2016-08-16
公開日2017-02-15
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution NMR-derived structure of calmodulin bound with ER alpha peptides
To Be Published
2NOX
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BU of 2nox by Molmil
Crystal structure of tryptophan 2,3-dioxygenase from Ralstonia metallidurans
分子名称: PROTOPORPHYRIN IX CONTAINING FE, Tryptophan 2,3-dioxygenase
著者Zhang, Y, Kang, S.A, Mukherjee, T, Bale, S, Crane, B.R, Begley, T.P, Ealick, S.E.
登録日2006-10-26
公開日2006-12-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure and mechanism of tryptophan 2,3-dioxygenase, a heme enzyme involved in tryptophan catabolism and in quinolinate biosynthesis.
Biochemistry, 46, 2007
8J0T
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BU of 8j0t by Molmil
Cryo-EM structure of Mycobacterium tuberculosis ATP synthase in the apo-form
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
著者Zhang, Y, Lai, Y, Liu, F, Rao, Z, Gong, H.
登録日2023-04-11
公開日2024-05-22
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structure of Mycobacterium tuberculosis ATP synthase
To Be Published
8JR0
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BU of 8jr0 by Molmil
Cryo-EM structure of Mycobacterium tuberculosis ATP synthase in complex with TBAJ-587
分子名称: (1~{S},2~{S})-1-(6-bromanyl-2-methoxy-quinolin-3-yl)-2-(2,6-dimethoxypyridin-4-yl)-4-(dimethylamino)-1-(2-fluoranyl-3-methoxy-phenyl)butan-2-ol, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Zhang, Y, Lai, Y, Liu, F, Rao, Z, Gong, H.
登録日2023-06-15
公開日2024-05-01
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structure of Mycobacterium tuberculosis ATP synthase
To Be Published
8J0S
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BU of 8j0s by Molmil
Cryo-EM structure of Mycobacterium tuberculosis ATP synthase in complex with bedaquiline(BDQ)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
著者Zhang, Y, Lai, Y, Liu, F, Rao, Z, Gong, H.
登録日2023-04-11
公開日2024-05-22
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献Structure of Mycobacterium tuberculosis ATP synthase
To Be Published
7XRJ
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BU of 7xrj by Molmil
crystal structure of N-acetyltransferase DgcN-25328
分子名称: Putative NAD-dependent epimerase/dehydratase family protein, SULFATE ION
著者Zhang, Y.Z, Yu, Y, Cao, H.Y, Chen, X.L, Wang, P.
登録日2022-05-10
公開日2023-02-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Novel D-glutamate catabolic pathway in marine Proteobacteria and halophilic archaea.
Isme J, 17, 2023
7VP1
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BU of 7vp1 by Molmil
Structure of a transcription factor and DNA complex
分子名称: DNA (5'-D(*AP*TP*GP*TP*GP*GP*TP*CP*CP*CP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*GP*GP*GP*AP*CP*CP*AP*CP*A)-3'), Transcription factor TCP10
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
実験手法X-RAY DIFFRACTION (2.902 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published
7VP7
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BU of 7vp7 by Molmil
Structure of a transcription factor and DNA complex
分子名称: DNA (5'-D(P*AP*GP*GP*CP*CP*CP*CP*CP*CP*CP*AP*T)-3'), Transcription factor TCP10
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.653 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published
7VP2
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BU of 7vp2 by Molmil
Structure of a transcription factor and DNA complex
分子名称: DNA (5'-D(*AP*TP*GP*TP*GP*GP*TP*CP*CP*CP*CP*AP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*TP*GP*GP*GP*GP*AP*CP*CP*AP*CP*A)-3'), Transcription factor TCP10
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published
7VP4
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BU of 7vp4 by Molmil
Structure of a transcription factor and DNA complex
分子名称: DNA (5'-D(*AP*TP*GP*TP*GP*GP*TP*CP*CP*CP*CP*AP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*TP*GP*GP*GP*GP*AP*CP*CP*AP*CP*A)-3'), Transcription factor TCP10
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published
7VP6
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BU of 7vp6 by Molmil
Structure of a transcription factor and DNA complex
分子名称: Transcription factor TCP15
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published
7VP5
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BU of 7vp5 by Molmil
Structure of a transcription factor and DNA complex
分子名称: DNA (5'-D(*AP*TP*GP*TP*GP*GP*TP*CP*CP*CP*GP*TP*GP*T)-3'), Transcription factor TCP10
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.992 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published
7VP3
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BU of 7vp3 by Molmil
Structure of a transcription factor and DNA complex
分子名称: DNA (5'-D(*AP*TP*GP*TP*GP*GP*GP*TP*CP*CP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*GP*GP*AP*CP*CP*CP*AP*C)-3'), Transcription factor TCP15
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.003 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published
7WHM
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BU of 7whm by Molmil
Closed spike of Bombyx mori cytoplasmic polyhedrosis virus
分子名称: PPPDE domain-containing protein
著者Zhang, Y, Cui, Y, Sun, J, Zhou, Z.H.
登録日2021-12-31
公開日2022-02-02
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Multiple conformations of trimeric spikes visualized on a non-enveloped virus.
Nat Commun, 13, 2022
7WHN
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BU of 7whn by Molmil
Opened spike of Bombyx mori cytoplasmic polyhedrosis virus
分子名称: PPPDE domain-containing protein
著者Zhang, Y, Cui, Y, Sun, J, Zhou, Z.H.
登録日2021-12-31
公開日2022-02-02
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Multiple conformations of trimeric spikes visualized on a non-enveloped virus.
Nat Commun, 13, 2022
7WHP
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BU of 7whp by Molmil
Pentameric turret of Bombyx mori cytoplasmic polyhedrosis virus after spike detaches.
分子名称: ADENOSINE-5'-TRIPHOSPHATE, S-ADENOSYLMETHIONINE, Structural protein VP3
著者Zhang, Y, Cui, Y, Sun, J, Zhou, Z.H.
登録日2021-12-31
公開日2022-02-02
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Multiple conformations of trimeric spikes visualized on a non-enveloped virus.
Nat Commun, 13, 2022
2LD5
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BU of 2ld5 by Molmil
Solution NMR-derived complex structure of Hoxa13 DNA binding domain bound to DNA
分子名称: DNA (5'-D(*CP*AP*AP*AP*TP*AP*AP*AP*AP*TP*C)-3'), DNA (5'-D(P*GP*AP*TP*TP*TP*TP*AP*TP*TP*TP*G)-3'), Homeobox protein Hox-A13
著者Zhang, Y.
登録日2011-05-14
公開日2011-08-10
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for sequence specific DNA binding and protein dimerization of HOXA13.
Plos One, 6, 2011
2LLO
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BU of 2llo by Molmil
Solution NMR-derived structure of calmodulin N-lobe bound with ER alpha peptide
分子名称: CALCIUM ION, Calmodulin, Estrogen receptor
著者Zhang, Y.
登録日2011-11-15
公開日2012-02-01
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for Ca2+-induced activation and dimerization of estrogen receptor alpha by calmodulin.
J.Biol.Chem., 287, 2012
2L80
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BU of 2l80 by Molmil
Solution Structure of the Zinc Finger Domain of USP13
分子名称: Ubiquitin carboxyl-terminal hydrolase 13, ZINC ION
著者Zhang, Y, Zhou, C, Zhou, Z, Song, A, Hu, H.
登録日2010-12-28
公開日2011-12-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Biochemical Characterization of the Ubiquitin Receptors in USP13 Reveals Different Catalytic Activation of Deubiquitination from Its Analogue USP5
To be Published
2LLQ
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BU of 2llq by Molmil
Solution nmr-derived structure of calmodulin c-lobe bound with er alpha peptide
分子名称: CALCIUM ION, Calmodulin, Estrogen receptor
著者Zhang, Y.
登録日2011-11-15
公開日2012-02-01
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for Ca2+-induced activation and dimerization of estrogen receptor alpha by calmodulin.
J.Biol.Chem., 287, 2012
2LRJ
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BU of 2lrj by Molmil
NMR solution structure of staphyloxanthin biosynthesis protein
分子名称: Staphyloxanthin biosynthesis protein, putative
著者Zhang, Y, Winsor, J, Anderson, W, Radhakrishnan, I, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-04-03
公開日2012-04-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of a putative S. aureus enzyme involved in the biosynthesis of staphyloxanthin
To be Published

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