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PDB: 526 results

6LVY
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BU of 6lvy by Molmil
Crystal structure of TLR7/Cpd-2 (SM-360320) complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-azanyl-2-(2-methoxyethoxy)-9-(phenylmethyl)-7H-purin-8-one, ...
Authors:Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2020-02-06
Release date:2020-11-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analysis reveals TLR7 dynamics underlying antagonism.
Nat Commun, 11, 2020
6LW0
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BU of 6lw0 by Molmil
Crystal structure of TLR7/Cpd-6 (DSR-139293) complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-ethoxy-8-(5-fluoranylpyridin-3-yl)-9-[[4-[[(1S,4S)-5-methyl-2,5-diazabicyclo[2.2.1]heptan-2-yl]methyl]phenyl]methyl]purin-6-amine, ...
Authors:Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2020-02-06
Release date:2020-11-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analysis reveals TLR7 dynamics underlying antagonism.
Nat Commun, 11, 2020
6LW1
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BU of 6lw1 by Molmil
Cryo-EM structure of TLR7/Cpd-7 (DSR-139970) complex in open form
Descriptor: 2-ethoxy-8-(5-fluoranylpyridin-3-yl)-6-methyl-9-[[4-[[(1S,4S)-5-methyl-2,5-diazabicyclo[2.2.1]heptan-2-yl]methyl]phenyl]methyl]purine, Toll-like receptor 7
Authors:Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2020-02-06
Release date:2020-11-11
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural analysis reveals TLR7 dynamics underlying antagonism.
Nat Commun, 11, 2020
6LVZ
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BU of 6lvz by Molmil
Crystal structure of TLR7/Cpd-3 (SM-394830) complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-azanyl-2-(2-methoxyethoxy)-9-(pyridin-3-ylmethyl)-7H-purin-8-one, ...
Authors:Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2020-02-06
Release date:2020-11-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Structural analysis reveals TLR7 dynamics underlying antagonism.
Nat Commun, 11, 2020
6LVX
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BU of 6lvx by Molmil
Crystal structure of TLR7/Cpd-1 (SM-374527) complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-azanyl-2-butoxy-9-(phenylmethyl)-7H-purin-8-one, ...
Authors:Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2020-02-06
Release date:2020-11-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Structural analysis reveals TLR7 dynamics underlying antagonism.
Nat Commun, 11, 2020
6MSM
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BU of 6msm by Molmil
Phosphorylated, ATP-bound human cystic fibrosis transmembrane conductance regulator (CFTR)
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ADENOSINE-5'-TRIPHOSPHATE, CHOLESTEROL, ...
Authors:Zhang, Z, Liu, F, Chen, J.
Deposit date:2018-10-16
Release date:2018-11-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular structure of the ATP-bound, phosphorylated human CFTR.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6O1V
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BU of 6o1v by Molmil
Complex of human cystic fibrosis transmembrane conductance regulator (CFTR) and GLPG1837
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ADENOSINE-5'-TRIPHOSPHATE, CHOLESTEROL, ...
Authors:Zhang, Z, Liu, F, Chen, J, Levit, A, Shoichet, B.
Deposit date:2019-02-21
Release date:2019-06-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural identification of a hotspot on CFTR for potentiation.
Science, 364, 2019
5UAR
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BU of 5uar by Molmil
Dephosphorylated, ATP-free cystic fibrosis transmembrane conductance regulator (CFTR) from zebrafish
Descriptor: Cystic fibrosis transmembrane conductance regulator, DECANE
Authors:Zhang, Z, Chen, J.
Deposit date:2016-12-19
Release date:2017-01-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Atomic Structure of the Cystic Fibrosis Transmembrane Conductance Regulator.
Cell, 167, 2016
5W81
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BU of 5w81 by Molmil
Phosphorylated, ATP-bound structure of zebrafish cystic fibrosis transmembrane conductance regulator (CFTR)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION
Authors:Zhang, Z, Liu, F, Chen, J.
Deposit date:2017-06-21
Release date:2017-07-19
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Conformational Changes of CFTR upon Phosphorylation and ATP Binding.
Cell, 170, 2017
3PBM
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BU of 3pbm by Molmil
The crystal structure of adenosine deaminase in complex with chloropurine from Pseudomonas aeruginosa
Descriptor: 6-chloro-9H-purine, Adenosine deaminase, ZINC ION
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-10-20
Release date:2010-12-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.591 Å)
Cite:The crystal structure of adenosine deaminase in complex with chloropurine from Pseudomonas aeruginosa
To be Published
3PU6
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BU of 3pu6 by Molmil
The crystal structure of an uncharacterized protein from Wolinella succinogenes
Descriptor: Uncharacterized protein
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-12-03
Release date:2011-01-19
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structure of an uncharacterized protein from Wolinella succinogenes
TO BE PUBLISHED
3PX7
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BU of 3px7 by Molmil
Crystal Structure of covalent complex of topoisomerase 1A with substrate
Descriptor: DNA 5'-D(*A*AP*TP*GP*CP*GP*CP*T)-3', DNA 5'-D(*TP*TP*GP*GP*G)-3', DNA topoisomerase, ...
Authors:Zhang, Z, Tse-dinh, Y.C, Cheng, B.
Deposit date:2010-12-09
Release date:2011-04-20
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of E. coli Topoisomerase I Trapped as Covalent Complex Intermediate with Cleaved DNA
To be Published
3PU5
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BU of 3pu5 by Molmil
The crystal structure of a putative extracellular solute-binding protein from Bordetella parapertussis
Descriptor: GLYCEROL, extracellular solute-binding protein
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-12-03
Release date:2010-12-22
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The crystal structure of aa putative extracellular solute-binding protein from Bordetella parapertussis
To be Published
3PZL
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BU of 3pzl by Molmil
The crystal structure of agmatine ureohydrolase of Thermoplasma volcanium
Descriptor: Agmatine ureohydrolase, MANGANESE (II) ION
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-12-14
Release date:2011-01-19
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The crystal structure of agmatine ureohydrolase of Thermoplasma volcanium
To be Published
2JX0
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BU of 2jx0 by Molmil
The paxillin-binding domain (PBD) of G Protein Coupled Receptor (GPCR)-kinase (GRK) interacting protein 1 (GIT1)
Descriptor: ARF GTPase-activating protein GIT1
Authors:Zhang, Z, Guibao, C.D, Simmerman, J.A, Zheng, J.
Deposit date:2007-11-01
Release date:2008-04-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:GIT1 paxillin-binding domain is a four-helix bundle, and it binds to both paxillin LD2 and LD4 motifs.
J.Biol.Chem., 283, 2008
3RHA
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BU of 3rha by Molmil
The crystal structure of Oxidoreductase from Arthrobacter aurescens
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GLYCEROL, Putrescine oxidase
Authors:Zhang, Z, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-04-11
Release date:2011-05-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.052 Å)
Cite:The crystal structure of Oxidoreductase from Arthrobacter aurescens
To be Published
3RYS
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BU of 3rys by Molmil
The crystal structure of adenine deaminase (AAur1117) from Arthrobacter aurescens
Descriptor: ADENINE, Adenosine deaminase 1, ZINC ION
Authors:Zhang, Z, Goble, A.M, Raushel, F.M, Swaminathan, S.
Deposit date:2011-05-11
Release date:2011-05-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:The crystal structure of adenine deaminase (AAur1117) from Arthrobacter aurescens
To be Published
3PWT
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BU of 3pwt by Molmil
Crystal structure of mutant E.coli topoisomerase IA
Descriptor: DNA topoisomerase, SULFATE ION
Authors:Zhang, Z, Bokun, C, Tse-Dinh, Y.-C.
Deposit date:2010-12-08
Release date:2010-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of mutant E.coli topoisomerase IA
To be Published
3Q34
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BU of 3q34 by Molmil
The crystal structure of YceI-like family protein from Pseudomonas syringae
Descriptor: GLYCEROL, Ubiquinone-8, YceI-like family protein
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-12-21
Release date:2011-02-23
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structure of YceI-like family protein from Pseudomonas syringae
TO BE PUBLISHED
7DEU
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BU of 7deu by Molmil
Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody scFv
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, antibody scFv
Authors:Zhang, Z, Zhang, G, Li, X, Rao, Z, Guo, Y.
Deposit date:2020-11-05
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for SARS-CoV-2 neutralizing antibodies with novel binding epitopes.
Plos Biol., 19, 2021
3SSZ
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BU of 3ssz by Molmil
The crystal structure of Mandelate racemase/muconate lactonizing enzyme from Rhodobacteraceae bacterium
Descriptor: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein, SULFATE ION
Authors:Zhang, Z, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, LaFleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-07-08
Release date:2011-08-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.392 Å)
Cite:The crystal structure of Mandelate racemase/muconate lactonizing enzyme from Rhodobacteraceae bacterium
To be Published
3T4W
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BU of 3t4w by Molmil
The crystal structure of mandelate racemase/muconate lactonizing enzyme from Sulfitobacter sp
Descriptor: Mandelate racemase/muconate lactonizing enzyme family protein
Authors:Zhang, Z, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, LaFleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-07-26
Release date:2011-08-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.522 Å)
Cite:The crystal structure of mandelate racemase/muconate lactonizing enzyme from Sulfitobacter sp
To be Published
3R03
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BU of 3r03 by Molmil
The crystal structure of NUDIX hydrolase from Rhodospirillum rubrum
Descriptor: ADENOSINE-5'-DIPHOSPHATE, NUDIX hydrolase
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-03-07
Release date:2011-05-11
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.491 Å)
Cite:The crystal structure of NUDIX hydrolase from Rhodospirillum rubrum
To be Published
3RHE
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BU of 3rhe by Molmil
The crystal structure of NAD-dependent benzaldehyde dehydrogenase from Legionella pneumophila
Descriptor: NAD-dependent benzaldehyde dehydrogenase
Authors:Zhang, Z, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-04-11
Release date:2011-05-04
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2.053 Å)
Cite:The crystal structure of NAD-dependent benzaldehyde dehydrogenase from Legionella pneumophila
To be Published
3RAZ
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BU of 3raz by Molmil
The crystal structure of thioredoxin-related protein from Neisseria meningitidis serogroup B
Descriptor: Thioredoxin-related protein
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-03-28
Release date:2011-05-11
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of thioredoxin-related protein from Neisseria meningitidis serogroup B
To be Published

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數據於2024-06-12公開中

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