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PDB: 1139 results

3JCU
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BU of 3jcu by Molmil
Cryo-EM structure of spinach PSII-LHCII supercomplex at 3.2 Angstrom resolution
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Wei, X.P, Zhang, X.Z, Su, X.D, Cao, P, Liu, X.Y, Li, M, Chang, W.R, Liu, Z.F.
Deposit date:2016-03-10
Release date:2016-05-25
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of spinach photosystem II-LHCII supercomplex at 3.2 A resolution
Nature, 534, 2016
3F8J
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BU of 3f8j by Molmil
Mouse UHRF1 SRA domain bound with hemi-methylated CpG, crystal structure in space group C222(1)
Descriptor: 5'-D(*DCP*DCP*DAP*DTP*DGP*(5CM)P*DGP*DCP*DTP*DGP*DAP*DC)-3', 5'-D(*DGP*DTP*DCP*DAP*DGP*DCP*DGP*DCP*DAP*DTP*DGP*DG)-3', E3 ubiquitin-protein ligase UHRF1, ...
Authors:Hashimoto, H, Horton, J.R, Zhang, X, Cheng, X.
Deposit date:2008-11-12
Release date:2009-01-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:UHRF1, a modular multi-domain protein, regulates replication-coupled crosstalk between DNA methylation and histone modifications.
Epigenetics, 4, 2009
6IJO
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BU of 6ijo by Molmil
Photosystem I of Chlamydomonas reinhardtii
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Pan, X, Ma, J, Su, X, Liu, Z, Zhang, X, Li, M.
Deposit date:2018-10-10
Release date:2019-03-20
Last modified:2019-05-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Antenna arrangement and energy transfer pathways of a green algal photosystem-I-LHCI supercomplex.
Nat Plants, 5, 2019
5CG9
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BU of 5cg9 by Molmil
NgTET1 in complex with 5mC DNA in space group P3221
Descriptor: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, DNA (5'-D(*TP*GP*TP*CP*AP*GP*(5CM)P*GP*CP*AP*TP*GP*G)-3'), ...
Authors:Hashimoto, H, Pais, J.E, Dai, N, Zhang, X, Zheng, Y, Cheng, X.
Deposit date:2015-07-09
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.693 Å)
Cite:Structure of Naegleria Tet-like dioxygenase (NgTet1) in complexes with a reaction intermediate 5-hydroxymethylcytosine DNA.
Nucleic Acids Res., 43, 2015
5CG8
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BU of 5cg8 by Molmil
NgTET1 in complex with 5hmC DNA
Descriptor: 2-OXOGLUTARIC ACID, DNA (5'-D(*AP*GP*AP*AP*TP*TP*CP*CP*GP*TP*TP*CP*CP*A)-3'), DNA (5'-D(*TP*GP*GP*AP*AP*(5HC)P*GP*GP*AP*AP*TP*TP*CP*T)-3'), ...
Authors:Hashimoto, H, Pais, J.E, Dai, N, Zhang, X, Zheng, Y, Cheng, X.
Deposit date:2015-07-09
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Structure of Naegleria Tet-like dioxygenase (NgTet1) in complexes with a reaction intermediate 5-hydroxymethylcytosine DNA.
Nucleic Acids Res., 43, 2015
5X5S
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BU of 5x5s by Molmil
Ligand induced structure of AmyP-SBD
Descriptor: Amylase
Authors:Li, X, Yu, J, Sun, H, Zhang, X.
Deposit date:2017-02-17
Release date:2017-04-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Ligand binding induced folding of a novel CBM69 starch binding domain
To Be Published
1RHP
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BU of 1rhp by Molmil
CRYSTAL STRUCTURE OF RECOMBINANT HUMAN PLATELET FACTOR 4
Descriptor: PLATELET FACTOR 4
Authors:Chen, L, Zhang, X.
Deposit date:1994-09-16
Release date:1994-11-30
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of recombinant human platelet factor 4.
Biochemistry, 33, 1994
4ZDS
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BU of 4zds by Molmil
Crystal Structure of core DNA binding domain of Arabidopsis Thaliana Transcription Factor Ethylene-Insensitive 3
Descriptor: Protein ETHYLENE INSENSITIVE 3
Authors:Song, J, Zhu, C, Zhang, X, Wen, X, Liu, L, Peng, J, Guo, H, Yi, C.
Deposit date:2015-04-18
Release date:2015-09-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Biochemical and Structural Insights into the Mechanism of DNA Recognition by Arabidopsis ETHYLENE INSENSITIVE3.
Plos One, 10, 2015
5YF0
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BU of 5yf0 by Molmil
Crystal structure of CARNMT1 bound to SAM
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Cao, R, Zhang, X, Li, H.
Deposit date:2017-09-20
Release date:2018-08-01
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Molecular basis for histidine N1 position-specific methylation by CARNMT1.
Cell Res., 28, 2018
1C78
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BU of 1c78 by Molmil
STAPHYLOKINASE (SAK) DIMER
Descriptor: STAPHYLOKINASE
Authors:Rao, Z, Jiang, F, Liu, Y, Zhang, X, Chen, Y, Bartlam, M, Song, H, Ding, Y.
Deposit date:2000-02-01
Release date:2000-08-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a staphylokinase: variant a model for reduced antigenicity.
Eur.J.Biochem., 269, 2002
1C77
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BU of 1c77 by Molmil
STAPHYLOKINASE (SAK) DIMER
Descriptor: STAPHYLOKINASE
Authors:Rao, Z, Jiang, F, Liu, Y, Zhang, X, Chen, Y, Bartlam, M, Song, H, Ding, Y.
Deposit date:2000-02-01
Release date:2000-08-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a staphylokinase: variant a model for reduced antigenicity.
Eur.J.Biochem., 269, 2002
1C79
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BU of 1c79 by Molmil
STAPHYLOKINASE (SAK) DIMER
Descriptor: STAPHYLOKINASE
Authors:Rao, Z, Jiang, F, Liu, Y, Zhang, X, Chen, Y, Bartlam, M, Song, H, Ding, Y.
Deposit date:2000-02-01
Release date:2000-08-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a staphylokinase: variant a model for reduced antigenicity.
Eur.J.Biochem., 269, 2002
5YCO
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BU of 5yco by Molmil
Complex structure of PCNA with UHRF2
Descriptor: E3 ubiquitin-protein ligase UHRF2, GLYCEROL, Proliferating cell nuclear antigen, ...
Authors:Wu, M, Chen, W, Hang, T, Wang, C, Zhang, X, Zang, J.
Deposit date:2017-09-07
Release date:2017-11-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Structure insights into the molecular mechanism of the interaction between UHRF2 and PCNA.
Biochem. Biophys. Res. Commun., 494, 2017
2HMY
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BU of 2hmy by Molmil
BINARY COMPLEX OF HHAI METHYLTRANSFERASE WITH ADOMET FORMED IN THE PRESENCE OF A SHORT NONPSECIFIC DNA OLIGONUCLEOTIDE
Descriptor: PROTEIN (CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI), S-ADENOSYLMETHIONINE
Authors:O'Gara, M, Zhang, X, Roberts, R.J, Cheng, X.
Deposit date:1999-02-08
Release date:1999-03-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structure of a binary complex of HhaI methyltransferase with S-adenosyl-L-methionine formed in the presence of a short non-specific DNA oligonucleotide.
J.Mol.Biol., 287, 1999
4LZM
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BU of 4lzm by Molmil
COMPARISON OF THE CRYSTAL STRUCTURE OF BACTERIOPHAGE T4 LYSOZYME AT LOW, MEDIUM, AND HIGH IONIC STRENGTHS
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, T4 LYSOZYME
Authors:Bell, J.A, Wilson, K, Zhang, X.-J, Faber, H.R, Nicholson, H, Matthews, B.W.
Deposit date:1991-01-25
Release date:1992-07-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Comparison of the crystal structure of bacteriophage T4 lysozyme at low, medium, and high ionic strengths.
Proteins, 10, 1991
2OBR
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BU of 2obr by Molmil
Crystal Structures of P Domain of Norovirus VA387
Descriptor: Capsid protein
Authors:Cao, S, Lou, Z, Jiang, X, Zhang, X.C, Li, X, Rao, Z.
Deposit date:2006-12-20
Release date:2007-04-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the recognition of blood group trisaccharides by norovirus.
J.Virol., 81, 2007
8REA
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BU of 8rea by Molmil
Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 5nt post-translocated complex
Descriptor: DNA (44-MER), DNA (51-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Gao, F, Zhang, X.
Deposit date:2023-12-10
Release date:2024-01-17
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of sigma 54 displacement and promoter escape in bacterial transcription.
Proc.Natl.Acad.Sci.USA, 121, 2024
3MCB
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BU of 3mcb by Molmil
Crystal structure of NAC domains of human nascent polypeptide-associated complex (NAC)
Descriptor: IODIDE ION, Nascent polypeptide-associated complex subunit alpha, Transcription factor BTF3
Authors:Wang, L.F, Zhang, W.C, Wang, L, Zhang, X.J.C, Li, X.M, Rao, Z.
Deposit date:2010-03-29
Release date:2010-07-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of NAC domains of human nascent polypeptide-associated complex (NAC) and its alphaNAC subunit
Protein Cell, 1, 2010
5ZGC
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BU of 5zgc by Molmil
Crystal Structure of SIRT3 in complex with H4K16bhb peptide
Descriptor: Histone H4K16bhb peptide, NAD-dependent protein deacetylase sirtuin-3, mitochondrial, ...
Authors:Li, H, Zhang, X.
Deposit date:2018-03-08
Release date:2019-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of SIRT3 in complex with H4K16bhb peptide
To be published
8EW2
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BU of 8ew2 by Molmil
Cryo-EM structure of Aldolase embedded in crystalline ice
Descriptor: Fructose-bisphosphate aldolase A
Authors:Shi, H, Wu, C, Zhang, X.
Deposit date:2022-10-21
Release date:2023-01-11
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Addressing compressive deformation of proteins embedded in crystalline ice.
Structure, 31, 2023
6LZ3
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BU of 6lz3 by Molmil
Structure of cryptochrome in active conformation
Descriptor: Cryptochrome2, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Shao, K, Zhang, X, Zhang, P.
Deposit date:2020-02-18
Release date:2020-04-29
Last modified:2020-11-11
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:The oligomeric structures of plant cryptochromes.
Nat.Struct.Mol.Biol., 27, 2020
8EW0
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BU of 8ew0 by Molmil
Cryo-EM structure of glutamate dehydrogenase frozen at various temperature
Descriptor: Glutamate dehydrogenase 1, mitochondrial
Authors:Shi, H, Wu, C, Zhang, X.
Deposit date:2022-10-21
Release date:2023-01-11
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Addressing compressive deformation of proteins embedded in crystalline ice.
Structure, 31, 2023
8I39
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BU of 8i39 by Molmil
Cryo-EM structure of abscisic acid transporter AtABCG25 with ABA
Descriptor: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, ABC transporter G family member 25
Authors:Huang, X, Zhang, X, Zhang, P.
Deposit date:2023-01-16
Release date:2023-09-13
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Cryo-EM structure and molecular mechanism of abscisic acid transporter ABCG25.
Nat.Plants, 9, 2023
8I3D
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BU of 8i3d by Molmil
Cryo-EM structure of abscisic acid transporter AtABCG25
Descriptor: ABC transporter G family member 25
Authors:Huang, X, Zhang, X, Zhang, P.
Deposit date:2023-01-17
Release date:2023-09-13
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Cryo-EM structure and molecular mechanism of abscisic acid transporter ABCG25.
Nat.Plants, 9, 2023
8I3B
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BU of 8i3b by Molmil
Cryo-EM structure of abscisic acid transporter AtABCG25 in nanodisc
Descriptor: ABC transporter G family member 25, ADENOSINE-5'-TRIPHOSPHATE
Authors:Huang, X, Zhang, X, Zhang, P.
Deposit date:2023-01-16
Release date:2023-09-13
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Cryo-EM structure and molecular mechanism of abscisic acid transporter ABCG25.
Nat.Plants, 9, 2023

222036

數據於2024-07-03公開中

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