Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1157 results

5A9G
DownloadVisualize
BU of 5a9g by Molmil
Manganese Superoxide Dismutase from Sphingobacterium sp. T2
Descriptor: MANGANESE (II) ION, MANGANESE SUPEROXIDE DISMUTASE
Authors:Rashid, G.M.M, Taylor, C.R, Liu, Y, Zhang, X, Rea, D, Fulop, V, Bugg, T.D.H.
Deposit date:2015-07-21
Release date:2015-08-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Identification of Manganese Superoxide Dismutase from Sphingobacterium Sp. T2 as a Novel Bacterial Enzyme for Lignin Oxidation.
Acs Chem.Biol., 10, 2015
3KXL
DownloadVisualize
BU of 3kxl by Molmil
crystal structure of SsGBP mutation variant G235S
Descriptor: GTP-binding protein (HflX), THIOCYANATE ION
Authors:Huang, B, Li, X, Zhang, X.C, Rao, Z.
Deposit date:2009-12-03
Release date:2010-05-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Functional study on GTP hydrolysis by the GTP binding protein from Sulfolobus solfataricus, a member of the HflX family.
J.Biochem., 2010
3KXI
DownloadVisualize
BU of 3kxi by Molmil
crystal structure of SsGBP and GDP complex
Descriptor: GTP-binding protein (HflX), GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Huang, B, Li, X, Zhang, X.C, Rao, Z.
Deposit date:2009-12-03
Release date:2010-05-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Functional study on GTP hydrolysis by the GTP binding protein from Sulfolobus solfataricus, a member of the HflX family.
J.Biochem., 2010
4EW4
DownloadVisualize
BU of 4ew4 by Molmil
mouse MBD4 glycosylase domain in complex with DNA containing a ribose sugar
Descriptor: DNA (5'-D(*CP*CP*AP*TP*GP*(3DR)P*GP*CP*TP*GP*A)-3'), DNA (5'-D(*TP*CP*AP*GP*CP*GP*CP*AP*TP*GP*G)-3'), Methyl-CpG-binding domain protein 4, ...
Authors:Hashimoto, H, Zhang, X, Cheng, X.
Deposit date:2012-04-26
Release date:2012-07-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.791 Å)
Cite:Excision of thymine and 5-hydroxymethyluracil by the MBD4 DNA glycosylase domain: structural basis and implications for active DNA demethylation.
Nucleic Acids Res., 40, 2012
6HTS
DownloadVisualize
BU of 6hts by Molmil
Cryo-EM structure of the human INO80 complex bound to nucleosome
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-related protein 5, Chromatin-remodeling ATPase INO80, ...
Authors:Ayala, R, Willhoft, O, Aramayo, R.J, Wilkinson, M, McCormack, E.A, Ocloo, L, Wigley, D.B, Zhang, X.
Deposit date:2018-10-04
Release date:2018-11-07
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structure and regulation of the human INO80-nucleosome complex.
Nature, 556, 2018
6D21
DownloadVisualize
BU of 6d21 by Molmil
Crystal structure of the FERM domain of zebrafish FARP2
Descriptor: FERM, RhoGEF and pleckstrin domain protein 2
Authors:Kuo, Y.C, Zhang, X.
Deposit date:2018-04-12
Release date:2018-07-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Structural analyses of FERM domain-mediated membrane localization of FARP1.
Sci Rep, 8, 2018
5XNL
DownloadVisualize
BU of 5xnl by Molmil
Structure of stacked C2S2M2-type PSII-LHCII supercomplex from Pisum sativum
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Su, X.D, Ma, J, Wei, X.P, Cao, P, Zhu, D.J, Chang, W.R, Liu, Z.F, Zhang, X.Z, Li, M.
Deposit date:2017-05-23
Release date:2017-09-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structure and assembly mechanism of plant C2S2M2-type PSII-LHCII supercomplex
Science, 357, 2017
7CRB
DownloadVisualize
BU of 7crb by Molmil
Cryo-EM structure of plant NLR RPP1 LRR-ID domain in complex with ATR1
Descriptor: Avirulence protein ATR1, NAD+ hydrolase (NADase)
Authors:Ma, S.C, Lapin, D, Liu, L, Sun, Y, Song, W, Zhang, X.X, Logemann, E, Yu, D.L, Wang, J, Jirschitzka, J, Han, Z.F, SchulzeLefert, P, Parker, J.E, Chai, J.J.
Deposit date:2020-08-13
Release date:2020-12-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Direct pathogen-induced assembly of an NLR immune receptor complex to form a holoenzyme.
Science, 370, 2020
5XNM
DownloadVisualize
BU of 5xnm by Molmil
Structure of unstacked C2S2M2-type PSII-LHCII supercomplex from Pisum sativum
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Su, X.D, Ma, J, Wei, X.P, Cao, P, Zhu, D.J, Chang, W.R, Liu, Z.F, Zhang, X.Z, Li, M.
Deposit date:2017-05-23
Release date:2017-09-20
Last modified:2019-05-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure and assembly mechanism of plant C2S2M2-type PSII-LHCII supercomplex
Science, 357, 2017
6IYA
DownloadVisualize
BU of 6iya by Molmil
Structure of the DNA binding domain of antitoxin CopASO
Descriptor: Transcriptional regulator CopG family
Authors:Zhao, R, Li, F, Liu, L, Zhang, X.
Deposit date:2018-12-14
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure and allosteric coupling of type II antitoxin CopASO.
Biochem.Biophys.Res.Commun., 514, 2019
3KV6
DownloadVisualize
BU of 3kv6 by Molmil
Structure of KIAA1718, human Jumonji demethylase, in complex with alpha-ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, FE (II) ION, JmjC domain-containing histone demethylation protein 1D, ...
Authors:Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X.
Deposit date:2009-11-29
Release date:2009-12-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases.
Nat.Struct.Mol.Biol., 17, 2010
3PUS
DownloadVisualize
BU of 3pus by Molmil
PHF2 Jumonji-NOG-Ni(II)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, N-OXALYLGLYCINE, ...
Authors:Horton, J.R, Upadhyay, A.K, Hashimoto, H, Zhang, X, Cheng, X.
Deposit date:2010-12-06
Release date:2011-01-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural basis for human PHF2 Jumonji domain interaction with metal ions.
J.Mol.Biol., 406, 2011
4RO9
DownloadVisualize
BU of 4ro9 by Molmil
2.0A resolution structure of SRPN2 (S358E) from Anopheles gambiae
Descriptor: GLYCEROL, Serpin 2
Authors:Lovell, S, Battaile, K.P, Zhang, X, Meekins, D.A, An, C, Michel, K.
Deposit date:2014-10-28
Release date:2014-12-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Inhibitory Effects of Hinge Loop Mutagenesis in Serpin-2 from the Malaria Vector Anopheles gambiae.
J.Biol.Chem., 290, 2015
6K5H
DownloadVisualize
BU of 6k5h by Molmil
Structural and catalytic analysis of two diverse uridine phosphorylases in the oomycete Phytophthora capsici.
Descriptor: 1-O-phosphono-alpha-D-ribofuranose, URACIL, Uridine phosphorylase
Authors:Yang, C.C, Zhang, X.G.
Deposit date:2019-05-28
Release date:2019-06-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Structural and catalytic analysis of two diverse uridine phosphorylases in Phytophthora capsici.
Sci Rep, 10, 2020
4ROB
DownloadVisualize
BU of 4rob by Molmil
2.8A resolution structure of SRPN2 (K198C) from Anopheles gambiae
Descriptor: Serpin 2
Authors:Lovell, S, Battaile, K.P, Zhang, X, Meekins, D.A, An, C, Michel, K.
Deposit date:2014-10-28
Release date:2014-12-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:2.8A resolution structure of SRPN2 (K198C) from Anopheles gambiae
To be Published
7CRW
DownloadVisualize
BU of 7crw by Molmil
Cryo-EM structure of rNLRP1-rDPP9 complex
Descriptor: Dipeptidyl peptidase 9, NLR family protein 1
Authors:Huang, M.H, Zhang, X.X, Wang, J, Chai, J.J.
Deposit date:2020-08-14
Release date:2021-03-24
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Structural and biochemical mechanisms of NLRP1 inhibition by DPP9.
Nature, 592, 2021
220L
DownloadVisualize
BU of 220l by Molmil
GENERATING LIGAND BINDING SITES IN T4 LYSOZYME USING DEFICIENCY-CREATING SUBSTITUTIONS
Descriptor: BENZENE, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Baldwin, E.P, Baase, W.A, Zhang, X.-J, Feher, V, Matthews, B.W.
Deposit date:1997-06-25
Release date:1998-03-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Generation of ligand binding sites in T4 lysozyme by deficiency-creating substitutions.
J.Mol.Biol., 277, 1998
225L
DownloadVisualize
BU of 225l by Molmil
GENERATING LIGAND BINDING SITES IN T4 LYSOZYME USING DEFICIENCY-CREATING SUBSTITUTIONS
Descriptor: BETA-MERCAPTOETHANOL, PARA-XYLENE, T4 LYSOZYME
Authors:Baldwin, E.P, Baase, W.A, Zhang, X.-J, Feher, V, Matthews, B.W.
Deposit date:1997-06-25
Release date:1998-03-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Generation of ligand binding sites in T4 lysozyme by deficiency-creating substitutions.
J.Mol.Biol., 277, 1998
5WWL
DownloadVisualize
BU of 5wwl by Molmil
Crystal structure of the Schizogenesis pombe kinetochore Mis12C subcomplex
Descriptor: Centromere protein mis12, Kinetochore protein nnf1
Authors:Wang, C, Zhou, X, Wu, M, Zhang, X, Zang, J.
Deposit date:2017-01-02
Release date:2017-11-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Phosphorylation of CENP-C by Aurora B facilitates kinetochore attachment error correction in mitosis.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3PU8
DownloadVisualize
BU of 3pu8 by Molmil
PHF2 Jumonji-NOG-Fe(II) complex
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, FE (III) ION, ...
Authors:Horton, J.R, Upadhyay, A.K, Hashimoto, H, Zhang, X, Cheng, X.
Deposit date:2010-12-03
Release date:2011-01-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.943 Å)
Cite:Structural basis for human PHF2 Jumonji domain interaction with metal ions.
J.Mol.Biol., 406, 2011
7CGB
DownloadVisualize
BU of 7cgb by Molmil
Cryo-EM structure of the flagellar hook from Salmonella
Descriptor: Flagellar hook protein FlgE
Authors:Tan, J.X, Chang, S.H, Wang, X.F, Xu, C.H, Zhou, Y, Zhang, X, Zhu, Y.Q.
Deposit date:2020-07-01
Release date:2021-04-28
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of assembly and torque transmission of the bacterial flagellar motor.
Cell, 184, 2021
3PUM
DownloadVisualize
BU of 3pum by Molmil
Crystal structure of P domain dimer of Norovirus VA207
Descriptor: Capsid
Authors:Chen, Y, Tan, M, Xia, M, Hao, N, Zhang, X.C, Huang, P, Jiang, X, Li, X, Rao, Z.
Deposit date:2010-12-06
Release date:2011-08-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.252 Å)
Cite:Crystallography of a Lewis-binding norovirus, elucidation of strain-specificity to the polymorphic human histo-blood group antigens
Plos Pathog., 7, 2011
4RSQ
DownloadVisualize
BU of 4rsq by Molmil
2.9A resolution structure of SRPN2 (K198C/E359C) from Anopheles gambiae
Descriptor: Serpin 2
Authors:Lovell, S, Battaile, K.P, Zhang, X, Meekins, D.A, An, C, Michel, K.
Deposit date:2014-11-10
Release date:2014-12-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and Inhibitory Effects of Hinge Loop Mutagenesis in Serpin-2 from the Malaria Vector Anopheles gambiae.
J.Biol.Chem., 290, 2015
3L64
DownloadVisualize
BU of 3l64 by Molmil
T4 Lysozyme S44E/WT*
Descriptor: BETA-MERCAPTOETHANOL, Lysozyme
Authors:Blaber, M, Zhang, X.-J, Lindstrom, J.D, Pepiot, S.D, Baase, W.A, Matthews, B.W.
Deposit date:2009-12-23
Release date:2010-01-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Determination of alpha-helix propensity within the context of a folded protein. Sites 44 and 131 in bacteriophage T4 lysozyme.
J.Mol.Biol., 235, 1994
7DRB
DownloadVisualize
BU of 7drb by Molmil
Crystal structure of plant receptor like protein RXEG1 with xyloglucanase XEG1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cell 12A endoglucanase, ...
Authors:Sun, Y, Wang, Y, Zhang, X.X, Chen, Z.D, Xia, Y.Q, Sun, Y.J, Zhang, M.M, Xiao, Y, Han, Z.F, Wang, Y.C, Chai, J.J.
Deposit date:2020-12-27
Release date:2022-06-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Plant receptor-like protein activation by a microbial glycoside hydrolase.
Nature, 610, 2022

222624

건을2024-07-17부터공개중

PDB statisticsPDBj update infoContact PDBjnumon