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PDB: 38 件
1NH4
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BU of 1nh4 by Molmil
Structure of the coat protein in fd filamentous bacteriophage particles
分子名称: Major coat protein
著者Zeri, A.C, Mesleh, M.F, Nevzorov, A.A, Opella, S.J.
登録日2002-12-18
公開日2003-05-06
最終更新日2024-05-22
実験手法SOLID-STATE NMR
主引用文献Structure of the coat protein in fd filamentous bacteriophage particles determined by solid-state NMR spectroscopy
Proc.Natl.Acad.Sci.USA, 100, 2003
2K5L
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BU of 2k5l by Molmil
Solution NMR Structure of Protein FeoA from Clostridium thermocellum, Northeast Structural Genomics Consortium Target CmR17
分子名称: FeoA
著者Zeri, A, Singarapu, K.K, Mills, J.L, Wu, Y, Garcia, E, Wang, H, Jiang, M, Foote, E.L, Xiao, R, Nair, R, Everett, J.K, Swapna, G.V.T, Acton, T.B, Rost, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
登録日2008-06-29
公開日2008-09-02
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution NMR Structure of Protein FeoA from Clostridium thermocellum, Northeast Structural Genomics Consortium Target CmR17
To be Published
7N5Z
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BU of 7n5z by Molmil
SARS-CoV-2 Main protease C145S mutant
分子名称: 3C-like proteinase
著者Noske, G.D, Nakamura, A.M, Gawriljuk, V.O, Lima, G.M.A, Zeri, A.C.M, Nascimento, A.F.Z, Oliva, G, Godoy, A.S.
登録日2021-06-07
公開日2021-06-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献A Crystallographic Snapshot of SARS-CoV-2 Main Protease Maturation Process.
J.Mol.Biol., 433, 2021
7N6N
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BU of 7n6n by Molmil
SARS-CoV-2 Main protease C145S mutant in complex with N and C-terminal residues
分子名称: 3C-like proteinase
著者Noske, G.D, Nakamura, A.M, Gawriljuk, V.O, Lima, G.M.A, Zeri, A.C.M, Nascimento, A.F.Z, Fernandes, R.S, Oliva, G, Godoy, A.S.
登録日2021-06-08
公開日2021-06-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A Crystallographic Snapshot of SARS-CoV-2 Main Protease Maturation Process.
J.Mol.Biol., 433, 2021
4U39
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BU of 4u39 by Molmil
Crystal Structure of FtsZ:MciZ Complex from Bacillus subtilis
分子名称: Cell division factor, Cell division protein FtsZ, PHOSPHATE ION
著者Bisson-Filho, A.W, Discola, K.F, Castellen, P, Blasios, V, Martins, A, Sforca, M.L, Garcia, W, Zeri, A.C, Erickson, H.P, Dessen, A, Gueiros-Filho, F.J.
登録日2014-07-19
公開日2015-03-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.194 Å)
主引用文献Crystal Structure of FtsZ:MciZ Complex from Bacillus subtilis
To be Published
5KLE
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BU of 5kle by Molmil
Structure of CBM_E1, a novel carbohydrate-binding module found by sugar cane soil metagenome, complexed with cellopentaose
分子名称: Carbohydrate binding module E1, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Liberato, M.V, Campos, B.M, Zeri, A.C.M, Squina, F.M.
登録日2016-06-24
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A Novel Carbohydrate-binding Module from Sugar Cane Soil Metagenome Featuring Unique Structural and Carbohydrate Affinity Properties.
J.Biol.Chem., 291, 2016
5KLC
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BU of 5klc by Molmil
Structure of CBM_E1, a novel carbohydrate-binding module found by sugar cane soil metagenome
分子名称: Carbohydrate binding module E1
著者Liberato, M.V, Campos, B.M, Zeri, A.C.M, Squina, F.M.
登録日2016-06-24
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.746 Å)
主引用文献A Novel Carbohydrate-binding Module from Sugar Cane Soil Metagenome Featuring Unique Structural and Carbohydrate Affinity Properties.
J.Biol.Chem., 291, 2016
5KLF
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BU of 5klf by Molmil
Structure of CBM_E1, a novel carbohydrate-binding module found by sugar cane soil metagenome, complexed with cellopentaose and gadolinium ion
分子名称: Carbohydrate binding module E1, GADOLINIUM ATOM, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Liberato, M.V, Campos, B.M, Zeri, A.C.M, Squina, F.M.
登録日2016-06-24
公開日2016-09-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献A Novel Carbohydrate-binding Module from Sugar Cane Soil Metagenome Featuring Unique Structural and Carbohydrate Affinity Properties.
J.Biol.Chem., 291, 2016
2MMV
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BU of 2mmv by Molmil
ZapA mutant dimer from Geobacillus stearothermophilus
分子名称: Cell division protein ZapA
著者Nogueira, M.L, Sforca, M, Zeri, A.
登録日2014-03-19
公開日2015-06-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Backbone and side chain NMR assignments of Geobacillus stearothermophilus ZapA allow identification of residues that mediate the interaction of ZapA with FtsZ.
Biomol.Nmr Assign., 9, 2015
2MRW
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BU of 2mrw by Molmil
Solution Structure of MciZ from Bacillus subtilis
分子名称: Cell division factor
著者Castellen, P, Sforca, M.L, Zeri, A.C.M, Gueiros-Filho, F.J.
登録日2014-07-16
公開日2015-03-25
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献FtsZ filament capping by MciZ, a developmental regulator of bacterial division.
Proc.Natl.Acad.Sci.USA, 112, 2015
2M4I
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BU of 2m4i by Molmil
Solution structure of Bacillus subtilis MinC N-terminal domain
分子名称: Septum site-determining protein MinC
著者Castellen, P, Sforca, M.L, Zeri, A.C.M, Gueiros-Filho, F.J.
登録日2013-02-05
公開日2014-03-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of Bacillus subtilis MinC N-terminal domain
To be Published
7KVL
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BU of 7kvl by Molmil
SARS-CoV-2 Main protease immature form - FMAX Library E01 fragment
分子名称: 2-chloropyridine-4-carboxamide, 3C-like proteinase, DI(HYDROXYETHYL)ETHER, ...
著者Noske, G.D, Nakamura, A.M, Gawriljuk, V.O, Lima, G.M.A, Zeri, A.C.M, Nascimento, A.F.Z, Fernandes, R.S, Oliva, G, Godoy, A.S.
登録日2020-11-28
公開日2020-12-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献A Crystallographic Snapshot of SARS-CoV-2 Main Protease Maturation Process.
J.Mol.Biol., 433, 2021
7MBG
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BU of 7mbg by Molmil
SARS-CoV-2 Main protease in orthorhombic space group
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE
著者Fearon, D, Douangamath, A, von Delft, F, Noske, G.D, Nakamura, A.M, Gawriljuk, V.O, Lima, G.M.A, Zeri, A.C.M, Nascimento, A.F.Z, Oliva, G, Godoy, A.S.
登録日2021-03-31
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献A Crystallographic Snapshot of SARS-CoV-2 Main Protease Maturation Process.
J.Mol.Biol., 433, 2021
7KPH
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BU of 7kph by Molmil
SARS-CoV-2 Main Protease in mature form
分子名称: 3C-like proteinase
著者Noske, G.D, Nakamura, A.M, Gawriljuk, V.O, Lima, G.M.A, Zeri, A.C.M, Nascimento, A.F.Z, Oliva, G, Godoy, A.S.
登録日2020-11-11
公開日2020-11-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献A Crystallographic Snapshot of SARS-CoV-2 Main Protease Maturation Process.
J.Mol.Biol., 433, 2021
7KVR
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BU of 7kvr by Molmil
SARS-CoV-2 Main protease immature form - FMAX Library E09 fragment
分子名称: 3C-like proteinase, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
著者Noske, G.D, Nakamura, A.M, Gawriljuk, V.O, Lima, G.M.A, Zeri, A.C.M, Nascimento, A.F.Z, Fernandes, R.S, Oliva, G, Godoy, A.S.
登録日2020-11-28
公開日2020-12-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献A Crystallographic Snapshot of SARS-CoV-2 Main Protease Maturation Process.
J.Mol.Biol., 433, 2021
7KFI
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BU of 7kfi by Molmil
SARS-CoV-2 Main protease immature form - apo structure
分子名称: 3C-like proteinase, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE
著者Noske, G.D, Nakamura, A.M, Gawriljuk, V.O, Lima, G.M.A, Zeri, A.C.M, Nascimento, A.F.Z, Oliva, G, Godoy, A.S.
登録日2020-10-14
公開日2020-10-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A Crystallographic Snapshot of SARS-CoV-2 Main Protease Maturation Process.
J.Mol.Biol., 433, 2021
7LFP
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BU of 7lfp by Molmil
SARS-CoV-2 Main protease immature form - F2X Entry Library G05 fragment
分子名称: 3C-like proteinase, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
著者Noske, G.D, Nakamura, A.M, Gawriljuk, V.O, Lima, G.M.A, Zeri, A.C.M, Nascimento, A.F.Z, Oliva, G, Godoy, A.S.
登録日2021-01-18
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Crystallographic Snapshot of SARS-CoV-2 Main Protease Maturation Process.
J.Mol.Biol., 433, 2021
7LDX
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BU of 7ldx by Molmil
SARS-CoV-2 Main protease immature form - F2X Entry Library E06 fragment
分子名称: (3-endo)-8-benzyl-8-azabicyclo[3.2.1]octan-3-ol, 3C-like proteinase, DI(HYDROXYETHYL)ETHER, ...
著者Noske, G.D, Nakamura, A.M, Gawriljuk, V.O, Lima, G.M.A, Zeri, A.C.M, Nascimento, A.F.Z, Oliva, G, Godoy, A.S.
登録日2021-01-14
公開日2021-01-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献A Crystallographic Snapshot of SARS-CoV-2 Main Protease Maturation Process.
J.Mol.Biol., 433, 2021
7LFE
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BU of 7lfe by Molmil
SARS-CoV-2 Main protease immature form - F2X Entry Library E03 fragment
分子名称: (2R,4R)-1-phenylhexahydropyrimidine-2,4-diol, 3C-like proteinase, DI(HYDROXYETHYL)ETHER, ...
著者Noske, G.D, Nakamura, A.M, Gawriljuk, V.O, Lima, G.M.A, Zeri, A.C.M, Nascimento, A.F.Z, Oliva, G, Godoy, A.S.
登録日2021-01-16
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献A Crystallographic Snapshot of SARS-CoV-2 Main Protease Maturation Process.
J.Mol.Biol., 433, 2021
7JR3
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BU of 7jr3 by Molmil
SARS-CoV-2 3CL protease crystallized under reducing conditions
分子名称: 3C-like proteinase
著者de Oliveira, R.R, Nascimento, A.F.Z, Zeri, A.C.M, Trivella, D.B.B.
登録日2020-08-11
公開日2020-08-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献SARS-CoV-2 3CL protease crystallized under reducing conditions.
To be Published
7JR4
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BU of 7jr4 by Molmil
SARS-CoV-2 3CL protease with alternative conformation of the active site promoted by methylene-bridged cysteine and lysine residues
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE
著者Nascimento, A.F.Z, de Oliveira, R.R, Zeri, A.C.M, Trivella, D.B.B.
登録日2020-08-11
公開日2020-08-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献SARS-CoV-2 3CL protease with alternative conformation of the active site promoted by methylene-bridged cysteine and lysine residues
To be Published
2L8A
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BU of 2l8a by Molmil
Structure of a novel CBM3 lacking the calcium-binding site
分子名称: Endoglucanase
著者Paiva, J.H, Meza, A.N, Sforca, M.L, Navarro, R.Z, Neves, J.L, Santos, C.R, Murakami, M.T, Zeri, A.C.
登録日2011-01-07
公開日2011-12-21
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168.
Biochem.J., 441, 2012
2JR1
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BU of 2jr1 by Molmil
Solution structure of the DNA binding domain of a nucleoid-associated protein, H-NS, from the phytopathogen Xylella fastidiosa.
分子名称: Virulence regulator
著者Rosselli, L.K, Sforca, M.L, Souza, A.P, Zeri, A.C.
登録日2007-06-18
公開日2007-09-25
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the DNA binding domain of a nucleoid-associated protein, H-NS, from the phytopathogen Xylella fastidiosa.
To be Published
2K5F
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BU of 2k5f by Molmil
Solution NMR structure of FeoA protein from Chlorobium tepidum. Northeast Structural Genomics Consortium target CtR121
分子名称: Ferrous iron transport protein A
著者Eletsky, A, Sathyamoorthy, B, Mills, J.L, Zeri, A, Zhao, L, Hamilton, K, Foote, E.L, Xiao, R, Nair, R, Baran, M.C, Swapna, G.V.T, Acton, T.B, Rost, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
登録日2008-06-27
公開日2008-08-19
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution NMR structure of FeoA protein from Chlorobium tepidum. Northeast Structural Genomics Consortium target CtR121
To be Published
2M70
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BU of 2m70 by Molmil
Structural determination of the Citrus sinensis Poly(A)-Binding Protein CsPABP1
分子名称: Poly(A)-binding protein 1
著者Sforca, M.L, Domingues, M.N, Zeri, A.C.M, Benedetti, C.E.
登録日2013-04-16
公開日2014-04-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural determination of the Citrus sinensis Poly(A)-Binding Protein CsPABP1
To be Published

 

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