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PDB: 89 results

5CB5
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BU of 5cb5 by Molmil
Structural Insights into the Mechanism of Escherichia coli Ymdb
Descriptor: ACETATE ION, ADENOSINE-5-DIPHOSPHORIBOSE, O-acetyl-ADP-ribose deacetylase, ...
Authors:Zhang, W, Wang, C, Song, Y, Shao, C, Zhang, X, Zang, J.
Deposit date:2015-06-30
Release date:2015-11-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into the mechanism of Escherichia coli YmdB: A 2'-O-acetyl-ADP-ribose deacetylase
J.Struct.Biol., 192, 2015
5CMS
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BU of 5cms by Molmil
Structural Insights into the Mechanism of Escherichia coli Ymdb
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, O-acetyl-ADP-ribose deacetylase, SULFATE ION
Authors:Zhang, W, Wang, C, Song, Y, Shao, C, Zhang, X, Zang, J.
Deposit date:2015-07-17
Release date:2015-11-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Structural insights into the mechanism of Escherichia coli YmdB: A 2'-O-acetyl-ADP-ribose deacetylase
J.Struct.Biol., 192, 2015
5BOE
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BU of 5boe by Molmil
Crystal structure of Staphylococcus aureus enolase in complex with PEP
Descriptor: Enolase, GLYCEROL, MAGNESIUM ION, ...
Authors:Wang, C.L, Wu, Y.F, Han, L, Wu, M.H, Zhang, X, Zang, J.Y.
Deposit date:2015-05-27
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Octameric structure of Staphylococcus aureus enolase in complex with phosphoenolpyruvate
Acta Crystallogr.,Sect.D, 71, 2015
5BOF
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BU of 5bof by Molmil
Crystal Structure of Staphylococcus aureus Enolase
Descriptor: Enolase, MAGNESIUM ION, SULFATE ION
Authors:Wu, Y.F, Wang, C.L, Wu, M.H, Han, L, Zhang, X, Zang, J.Y.
Deposit date:2015-05-27
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Octameric structure of Staphylococcus aureus enolase in complex with phosphoenolpyruvate.
Acta Crystallogr.,Sect.D, 71, 2015
2GP3
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BU of 2gp3 by Molmil
Crystal structure of the catalytic core domain of jmjd2a
Descriptor: FE (II) ION, Jumonji domain-containing protein 2A, ZINC ION
Authors:Chen, Z, Zang, J, Whetstine, J, Hong, X, Davrazou, F, Kutateladze, T.G, Simpson, M, Dai, S, Hagman, J, Shi, Y, Zhang, G.
Deposit date:2006-04-16
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural insights into histone demethylation by JMJD2 family members
Cell(Cambridge,Mass.), 125, 2006
3UQH
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BU of 3uqh by Molmil
Crystal structure of aba receptor pyl10 (apo)
Descriptor: Abscisic acid receptor PYL10, SULFATE ION
Authors:Sun, D.M, Wang, H.P, Wu, M.H, Zang, J.Y, Tian, C.L.
Deposit date:2011-11-20
Release date:2011-12-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of Aba Receptor Pyl10
To be Published
2GP5
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BU of 2gp5 by Molmil
Crystal structure of catalytic core domain of jmjd2A complexed with alpha-Ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, FE (II) ION, Jumonji domain-containing protein 2A, ...
Authors:Chen, Z, Zang, J, Whetstine, J, Hong, X, Davrazou, F, Kutateladze, T.G, Simpson, M, Dai, S, Hagman, J, Shi, Y, Zhang, G.
Deposit date:2006-04-16
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural insights into histone demethylation by JMJD2 family members
Cell(Cambridge,Mass.), 125, 2006
5GOU
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BU of 5gou by Molmil
Structure of a 16-mer protein nanocage fabricated from its 24-mer analogue by subunit interface redesign
Descriptor: Ferritin heavy chain
Authors:Zhang, S, Zang, J, Wang, W, Wang, H, Zhao, G.
Deposit date:2016-07-29
Release date:2017-02-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Conversion of the Native 24-mer Ferritin Nanocage into Its Non-Native 16-mer Analogue by Insertion of Extra Amino Acid Residues.
Angew. Chem. Int. Ed. Engl., 55, 2016
5GN8
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BU of 5gn8 by Molmil
Structure of a 48-mer protein nanocage fabricated from its 24-mer analogue by subunit interface redesign
Descriptor: CALCIUM ION, Ferritin heavy chain
Authors:Zhang, S, Zang, J, Zhao, G, Mikami, B.
Deposit date:2016-07-19
Release date:2016-12-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.805 Å)
Cite:"Silent" Amino Acid Residues at Key Subunit Interfaces Regulate the Geometry of Protein Nanocages
ACS Nano, 10, 2016
2P5B
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BU of 2p5b by Molmil
The complex structure of JMJD2A and trimethylated H3K36 peptide
Descriptor: FE (II) ION, Histone H3, JmjC domain-containing histone demethylation protein 3A, ...
Authors:Zhang, G, Chen, Z, Zang, J, Hong, X, Shi, Y.
Deposit date:2007-03-14
Release date:2007-06-12
Last modified:2013-11-27
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural basis of the recognition of a methylated histone tail by JMJD2A.
Proc.Natl.Acad.Sci.USA, 104, 2007
4Y3O
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BU of 4y3o by Molmil
Crystal structure of Ribosomal oxygenase NO66 in complex with substrate Rpl8 peptide and Ni(II) and cofactor N-oxalyglycine
Descriptor: ACETATE ION, Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66, GLYCEROL, ...
Authors:Wang, C, Zhang, Q, Zang, J.
Deposit date:2015-02-10
Release date:2015-10-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the JmjC domain-containing protein NO66 complexed with ribosomal protein Rpl8.
Acta Crystallogr.,Sect.D, 71, 2015
3R93
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BU of 3r93 by Molmil
Crystal structure of the chromo domain of M-phase phosphoprotein 8 bound to H3K9Me3 peptide
Descriptor: H3K9Me3 peptide, M-phase phosphoprotein 8, UNKNOWN ATOM OR ION
Authors:Li, J, Li, Z, Ruan, J, Xu, C, Tong, Y, Pan, P.W, Tempel, W, Crombet, L, Min, J, Zang, J, Structural Genomics Consortium (SGC)
Deposit date:2011-03-24
Release date:2011-04-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.057 Å)
Cite:Structural basis for specific binding of human MPP8 chromodomain to histone H3 methylated at lysine 9.
Plos One, 6, 2011
3RY7
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BU of 3ry7 by Molmil
Crystal Structure of Sa239
Descriptor: GLYCEROL, Ribokinase
Authors:Li, J, Wu, M, Wang, L, Zang, J.
Deposit date:2011-05-11
Release date:2012-04-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of Sa239 reveals the structural basis for the activation of ribokinase by monovalent cations.
J.Struct.Biol., 177, 2012
3P12
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BU of 3p12 by Molmil
Crystal Structure of D-ribose Pyranase Sa240
Descriptor: D-ribose pyranase, GLYCEROL
Authors:Wu, M, Wang, L, Zang, J.
Deposit date:2010-09-29
Release date:2011-05-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of Sa240: A ribose pyranase homolog with partial active site from Staphylococcus aureus
J.Struct.Biol., 174, 2011
3P13
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BU of 3p13 by Molmil
Complex Structure of D-ribose Pyranase Sa240 with D-ribose
Descriptor: D-ribose pyranase, beta-D-ribopyranose
Authors:Wu, M, Wang, L, Zang, J.
Deposit date:2010-09-29
Release date:2011-05-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of Sa240: A ribose pyranase homolog with partial active site from Staphylococcus aureus
J.Struct.Biol., 174, 2011
4Y4R
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BU of 4y4r by Molmil
Crystal structure of ribosomal oxygenase NO66 dimer mutant
Descriptor: ACETATE ION, Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66, NICKEL (II) ION
Authors:Wang, C, Hang, T, Zang, J.
Deposit date:2015-02-11
Release date:2015-10-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of the JmjC domain-containing protein NO66 complexed with ribosomal protein Rpl8.
Acta Crystallogr.,Sect.D, 71, 2015
4E4H
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BU of 4e4h by Molmil
Crystal structure of Histone Demethylase NO66
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, FE (III) ION, ...
Authors:Wu, M, Tao, Y, Zang, J.
Deposit date:2012-03-13
Release date:2013-01-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:tructural Basis for Tetramerization-dependent Gene Repression by Histone Demethylase NO66
To be Published
4GO1
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BU of 4go1 by Molmil
Crystal Structure of full length transcription repressor LsrR from E. coli.
Descriptor: GLYCEROL, Transcriptional regulator LsrR
Authors:Wu, M, Tao, Y, Liu, X, Zang, J.
Deposit date:2012-08-17
Release date:2013-04-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis for Phosphorylated Autoinducer-2 Modulation of the Oligomerization State of the Global Transcription Regulator LsrR from Escherichia coli
J.Biol.Chem., 288, 2013
4GB0
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BU of 4gb0 by Molmil
Crystal Structure of the RING domain of RNF168
Descriptor: E3 ubiquitin-protein ligase RNF168, MALONATE ION, ZINC ION
Authors:Zhang, X.Q, Wang, C.L, Zang, J.Y.
Deposit date:2012-07-26
Release date:2013-07-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for role of ring finger protein RNF168 RING domain
Cell Cycle, 12, 2013
4GAZ
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BU of 4gaz by Molmil
Crystal Structure of a Jumonji Domain-containing Protein JMJD5
Descriptor: Lysine-specific demethylase 8, N-OXALYLGLYCINE, NICKEL (II) ION
Authors:Wang, H, Zhou, X, Zhang, X, Tao, Y, Chen, N, Zang, J.
Deposit date:2012-07-26
Release date:2013-08-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Crystal Structure of a Jumonji Domain-containing Protein JMJD5
To be Published
1WT9
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BU of 1wt9 by Molmil
crystal structure of Aa-X-bp-I, a snake venom protein with the activity of binding to coagulation factor X from Agkistrodon acutus
Descriptor: CALCIUM ION, agkisacutacin A chain, anticoagulant protein-B
Authors:Zhu, Z, Liu, S, Mo, X, Yu, X, Liang, Z, Zang, J, Zhao, W, Teng, M, Niu, L.
Deposit date:2004-11-18
Release date:2006-03-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Characterizations and Crystal structures of two snake venom proteins with the activity of binding coagulation factor X from Agkistrodon acutus
To be Published
7WQL
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BU of 7wql by Molmil
Bovin Beta-lactoglobulin binding with zinc ions
Descriptor: Beta-lactoglobulin, ZINC ION
Authors:Li, T, Ma, J, Zang, J, Zhao, G, Zhang, T.
Deposit date:2022-01-25
Release date:2022-08-31
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Zinc binding strength of proteins dominants zinc uptake in Caco-2 cells.
Rsc Adv, 12, 2022
3R6P
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BU of 3r6p by Molmil
Crystal structure of abscisic acid-bound PYL10
Descriptor: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, Abscisic acid receptor PYL10
Authors:Sun, D.M, Wu, M.H, Wang, H.P, Zang, J.Y, Tian, C.L.
Deposit date:2011-03-22
Release date:2011-12-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of abscisic acid-bound PYL10
To be Published
1Y17
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BU of 1y17 by Molmil
crystal structure of Aa-X-bp-II, a snake venom protein with the activity of binding to coagulation factor X from Agkistrodon acutus
Descriptor: CALCIUM ION, anticoagulant protein A, anticoagulant protein-B
Authors:Zhu, Z, Liu, S, Mo, X, Yu, X, Liang, Z, Zang, J, Zhao, W, Teng, M, Niu, L.
Deposit date:2004-11-17
Release date:2006-03-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Characterizations and Crystal structures of two snake venom proteins with the activity of binding coagulation factor X from Agkistrodon acutus
To be Published
3LD8
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BU of 3ld8 by Molmil
Structure of JMJD6 and Fab Fragments
Descriptor: Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, FE (III) ION, GLYCEROL, ...
Authors:Hong, X, Zang, J, White, J, Kappler, J.W, Wang, C, Zhang, G.
Deposit date:2010-01-12
Release date:2010-08-04
Last modified:2012-06-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Interaction of JMJD6 with single-stranded RNA.
Proc.Natl.Acad.Sci.USA, 107, 2010

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