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PDB: 142 results

3HEF
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BU of 3hef by Molmil
Crystal structure of the bacteriophage Sf6 terminase small subunit
Descriptor: Gene 1 protein
Authors:Zhao, H, Tang, L.
Deposit date:2009-05-08
Release date:2010-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the DNA-recognition component of the bacterial virus Sf6 genome-packaging machine
Proc.Natl.Acad.Sci.USA, 107, 2010
8DCK
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BU of 8dck by Molmil
Structure of hemolysin A secretion system HlyB/D complex, ATP-bound
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Alpha-hemolysin translocation ATP-binding protein HlyB, MAGNESIUM ION, ...
Authors:Zhao, H, Chen, J.
Deposit date:2022-06-16
Release date:2022-09-14
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The hemolysin A secretion system is a multi-engine pump containing three ABC transporters.
Cell, 185, 2022
4IDH
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BU of 4idh by Molmil
Crystal Structure of the large terminase subunit gp2 of bacterial virus Sf6
Descriptor: Gene 2 protein
Authors:Zhao, H, Christensen, T, Kamau, Y, Tang, L.
Deposit date:2012-12-12
Release date:2013-05-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structures of the phage Sf6 large terminase provide new insights into DNA translocation and cleavage.
Proc.Natl.Acad.Sci.USA, 110, 2013
4IEI
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BU of 4iei by Molmil
Crystal Structure of the large terminase subunit gp2 of bacterial virus Sf6 complexed with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Gene 2 protein
Authors:Zhao, H, Christensen, T, Kamau, Y, Tang, L.
Deposit date:2012-12-13
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structures of the phage Sf6 large terminase provide new insights into DNA translocation and cleavage.
Proc.Natl.Acad.Sci.USA, 110, 2013
4IEE
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BU of 4iee by Molmil
Crystal Structure of the large terminase subunit gp2 of bacterial virus Sf6 complexed with ATP-r-S
Descriptor: Gene 2 protein, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Zhao, H, Christensen, T, Kamau, Y, Tang, L.
Deposit date:2012-12-13
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structures of the phage Sf6 large terminase provide new insights into DNA translocation and cleavage.
Proc.Natl.Acad.Sci.USA, 110, 2013
4IFE
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BU of 4ife by Molmil
Crystal Structure of the large terminase subunit gp2 of bacterial virus Sf6 complexed with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Gene 2 protein
Authors:Zhao, H, Christensen, T, Kamau, Y, Tang, L.
Deposit date:2012-12-14
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structures of the phage Sf6 large terminase provide new insights into DNA translocation and cleavage.
Proc.Natl.Acad.Sci.USA, 110, 2013
2ZKZ
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BU of 2zkz by Molmil
Crystal structure of the transcriptional repressor PagR of Bacillus anthracis
Descriptor: Transcriptional repressor pagR
Authors:Zhao, H, Volkov, A, Veldore, V.H, Varughese, K.I.
Deposit date:2008-04-01
Release date:2009-04-07
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the transcriptional repressor PagR of Bacillus anthracis
Microbiology, 156, 2010
5C12
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BU of 5c12 by Molmil
Nuclease domain of the large terminase subunit gp2 of bacterial virus Sf6
Descriptor: Gene 2 protein, MAGNESIUM ION
Authors:Zhao, H, Tang, L.
Deposit date:2015-06-12
Release date:2015-10-21
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.517 Å)
Cite:Two distinct modes of metal ion binding in the nuclease active site of a viral DNA-packaging terminase: insight into the two-metal-ion catalytic mechanism.
Nucleic Acids Res., 43, 2015
5C2F
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BU of 5c2f by Molmil
K428A mutant nuclease domain of the large terminase subunit gp2 of bacterial virus Sf6 with Manganese and beta-thujaplicinol
Descriptor: 2,7-dihydroxy-4-(propan-2-yl)cyclohepta-2,4,6-trien-1-one, Gene 2 protein, MANGANESE (II) ION
Authors:Zhao, H, Tang, L.
Deposit date:2015-06-15
Release date:2015-10-21
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Two distinct modes of metal ion binding in the nuclease active site of a viral DNA-packaging terminase: insight into the two-metal-ion catalytic mechanism.
Nucleic Acids Res., 43, 2015
5C10
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BU of 5c10 by Molmil
Nuclease domain of the large terminase subunit gp2 of bacterial virus Sf6
Descriptor: Gene 2 protein
Authors:Zhao, H, Tang, L.
Deposit date:2015-06-12
Release date:2015-10-21
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Two distinct modes of metal ion binding in the nuclease active site of a viral DNA-packaging terminase: insight into the two-metal-ion catalytic mechanism.
Nucleic Acids Res., 43, 2015
5C2D
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BU of 5c2d by Molmil
K428A mutant gp2c of large terminase subunit from bacteriophage sf6 with calcium
Descriptor: CALCIUM ION, Gene 2 protein
Authors:Zhao, H, Tang, L.
Deposit date:2015-06-15
Release date:2015-10-21
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Two distinct modes of metal ion binding in the nuclease active site of a viral DNA-packaging terminase: insight into the two-metal-ion catalytic mechanism.
Nucleic Acids Res., 43, 2015
5C15
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BU of 5c15 by Molmil
K428A mutant nuclease domain of the large terminase subunit gp2 of bacterial virus Sf6 with Manganese
Descriptor: Gene 2 protein, MANGANESE (II) ION
Authors:Zhao, H, Tang, L.
Deposit date:2015-06-12
Release date:2015-10-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Two distinct modes of metal ion binding in the nuclease active site of a viral DNA-packaging terminase: insight into the two-metal-ion catalytic mechanism.
Nucleic Acids Res., 43, 2015
3F6P
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BU of 3f6p by Molmil
Crystal Structure of unphosphorelated receiver domain of YycF
Descriptor: Transcriptional regulatory protein yycF
Authors:Zhao, H, Tang, L.
Deposit date:2008-11-06
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Preliminary crystallographic studies of the regulatory domain of response regulator YycF from an essential two-component signal transduction system.
Acta Crystallogr.,Sect.F, 65, 2009
3NB3
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BU of 3nb3 by Molmil
The host outer membrane proteins OmpA and OmpC are packed at specific sites in the Shigella phage Sf6 virion as structural components
Descriptor: Outer membrane protein A, Outer membrane protein C
Authors:Zhao, H, Sequeira, R.D, Galeva, N.A, Tang, L.
Deposit date:2010-06-02
Release date:2011-02-16
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (19 Å)
Cite:The host outer membrane proteins OmpA and OmpC are associated with the Shigella phage Sf6 virion.
Virology, 409, 2011
5U93
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BU of 5u93 by Molmil
Structure of the Regulatory Domain of the AraC Family Transcriptional Activator RhaR
Descriptor: HTH-type transcriptional activator RhaR, NICKEL (II) ION, beta-L-rhamnopyranose
Authors:Zhao, H.
Deposit date:2016-12-15
Release date:2017-12-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Structure of the Regulatory Domain of the AraC Family Transcriptional Activator RhaR
To Be Published
5U9E
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BU of 5u9e by Molmil
Structure of the Regulatory Domain of the AraC Family Transcriptional Activator RhaR
Descriptor: HTH-type transcriptional activator RhaR, NICKEL (II) ION, beta-L-rhamnopyranose
Authors:Zhao, H.
Deposit date:2016-12-16
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structure of the Regulatory Domain of the AraC Family Transcriptional Activator RhaR
To Be Published
4DZP
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BU of 4dzp by Molmil
Crystal structure of the terminase small subunit gp1 with R48A mutation of the bacterial virus sf6
Descriptor: Gene 1 protein
Authors:Zhao, H, Tang, L.
Deposit date:2012-03-01
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Functional Studies of the Phage Sf6 Terminase Small Subunit Reveal a DNA-Spooling Device Facilitated by Structural Plasticity.
J.Mol.Biol., 423, 2012
5AGJ
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BU of 5agj by Molmil
Crystal structure of the LeuRS editing domain of Candida albicans in complex with the adduct AN2690-AMP
Descriptor: POTENTIAL CYTOSOLIC LEUCYL TRNA SYNTHETASE, [(6-AMINO-9H-PURIN-9-YL)-[5-FLUORO-1,3-DIHYDRO-1-HYDROXY-2,1-BENZOXABOROLE]-4'YL]METHYL DIHYDROGEN PHOSPHATE
Authors:Zhao, H, Palencia, A, Seiradake, E, Ghaemi, Z, Luthey-Schulten, Z, Cusack, S, Martinis, S.A.
Deposit date:2015-02-02
Release date:2015-07-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Analysis of the Resistance Mechanism of a Benzoxaborole Inhibitor Reveals Insight Into the Leucyl-tRNA Synthetase Editing Mechanism.
Acs Chem.Biol., 10, 2015
4DYQ
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BU of 4dyq by Molmil
High resolution crystal structure of terminase small subunit gp1 of the bacterial virus sf6
Descriptor: Gene 1 protein
Authors:Zhao, H, Tang, L.
Deposit date:2012-02-29
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Structural and Functional Studies of the Phage Sf6 Terminase Small Subunit Reveal a DNA-Spooling Device Facilitated by Structural Plasticity.
J.Mol.Biol., 423, 2012
4DYR
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BU of 4dyr by Molmil
Crystal structure of terminase small subunit gp1 of the bacterial virus sf6 with CAPS PH10.5 buffer
Descriptor: Gene 1 protein
Authors:Zhao, H, Tang, L.
Deposit date:2012-02-29
Release date:2012-10-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural and Functional Studies of the Phage Sf6 Terminase Small Subunit Reveal a DNA-Spooling Device Facilitated by Structural Plasticity.
J.Mol.Biol., 423, 2012
4DZJ
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BU of 4dzj by Molmil
Crystal structure of the terminase small subunit gp1 with K59E mutation of the bacterial virus sf6
Descriptor: Gene 1 protein
Authors:Zhao, H, Tang, L.
Deposit date:2012-03-01
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Functional Studies of the Phage Sf6 Terminase Small Subunit Reveal a DNA-Spooling Device Facilitated by Structural Plasticity.
J.Mol.Biol., 423, 2012
5AGI
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BU of 5agi by Molmil
Crystal structure of the LeuRS editing domain of Candida albicans Mutant K510A in complex with the adduct formed by AN2690-AMP
Descriptor: GLYCEROL, POTENTIAL CYTOSOLIC LEUCYL TRNA SYNTHETASE, [(6-AMINO-9H-PURIN-9-YL)-[5-FLUORO-1,3-DIHYDRO-1-HYDROXY-2,1-BENZOXABOROLE]-4'YL]METHYL DIHYDROGEN PHOSPHATE
Authors:Zhao, H, Palencia, A, Seiradake, E, Ghaemi, Z, Luthey-Schulten, Z, Cusack, S, Martinis, S.A.
Deposit date:2015-02-02
Release date:2015-07-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Analysis of the Resistance Mechanism of a Benzoxaborole Inhibitor Reveals Insight Into the Leucyl-tRNA Synthetase Editing Mechanism.
Acs Chem.Biol., 10, 2015
4DYC
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BU of 4dyc by Molmil
Crystal Structure of the terminase small subunit gp1 with D19R mutation of the bacterial virus sf6
Descriptor: Terminase small subunit
Authors:Zhao, H, Tang, L.
Deposit date:2012-02-28
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Functional Studies of the Phage Sf6 Terminase Small Subunit Reveal a DNA-Spooling Device Facilitated by Structural Plasticity.
J.Mol.Biol., 423, 2012
5AGH
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BU of 5agh by Molmil
Crystal structure of the LeuRS editing domain of Candida albicans Mutant K510A
Descriptor: ACETATE ION, POTENTIAL CYTOSOLIC LEUCYL TRNA SYNTHETASE
Authors:Zhao, H, Palencia, A, Seiradake, E, Ghaemi, Z, Luthey-Schulten, Z, Cusack, S, Martinis, S.A.
Deposit date:2015-02-02
Release date:2015-07-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Analysis of the Resistance Mechanism of a Benzoxaborole Inhibitor Reveals Insight Into the Leucyl-tRNA Synthetase Editing Mechanism.
Acs Chem.Biol., 10, 2015
1BK9
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BU of 1bk9 by Molmil
PHOSPHOLIPASE A2 MODIFIED BY PBPB
Descriptor: 1,4-BUTANEDIOL, CALCIUM ION, PHOSPHOLIPASE A2, ...
Authors:Zhao, H, Tang, L, Wang, X, Lin, Z, Zhou, Y.
Deposit date:1998-07-16
Release date:1999-03-02
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a snake venom phospholipase A2 modified by p-bromo-phenacyl-bromide.
Toxicon, 36, 1998

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