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PDB: 100 results

4NKM
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BU of 4nkm by Molmil
Crystal structure of engineered anti-EE scFv antibody fragment
Descriptor: Engineered scFv
Authors:Kalyoncu, S, Hyun, J, Pai, J.C, Johnson, J.L, Etzminger, K, Jain, A, Heaner Jr, D, Molares, I.A, Truskett, T.M, Maynard, J.A, Lieberman, R.L.
Deposit date:2013-11-12
Release date:2014-03-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.71 Å)
Cite:Effects of protein engineering and rational mutagenesis on crystal lattice of single chain antibody fragments.
Proteins, 82, 2014
4NKD
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BU of 4nkd by Molmil
Crystal structure of engineered anti-EE scFv antibody fragment
Descriptor: Engineered scFv
Authors:Kalyoncu, S, Hyun, J, Pai, J.C, Johnson, J.L, Etzminger, K, Jain, A, Heaner Jr, D, Molares, I.A, Truskett, T.M, Maynard, J.A, Lieberman, R.L.
Deposit date:2013-11-12
Release date:2014-03-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.303 Å)
Cite:Effects of protein engineering and rational mutagenesis on crystal lattice of single chain antibody fragments.
Proteins, 82, 2014
1K03
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BU of 1k03 by Molmil
Crystal Structure of Old Yellow Enzyme Mutant Gln114Asn Complexed with Para-hydroxy Benzaldehyde
Descriptor: FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, NADPH DEHYDROGENASE 1, ...
Authors:Brown, B.J, Hyun, J, Duvvuri, S.D, Karplus, P.A, Massey, V.
Deposit date:2001-09-18
Release date:2001-09-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The role of glutamine 114 in old yellow enzyme
J.Biol.Chem., 277, 2002
3WMK
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BU of 3wmk by Molmil
Crystal structure of Hen egg-white lysozyme in pH 4.5 Sodium Acetatewith 1M NaCl at 277K
Descriptor: Lysozyme C
Authors:Lim, H, Rho, J, Hyun, J.K, Kim, Y.J.
Deposit date:2013-11-19
Release date:2014-10-08
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Crystal structure of Hen egg-white lysozyme in pH 4.5 Sodium Acetatewith 1M NaCl at 277K
TO BE PUBLISHED
7DGQ
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BU of 7dgq by Molmil
Activity optimized supercomplex state1
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (5 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
5JH2
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BU of 5jh2 by Molmil
Crystal structure of the holo form of AKR4C7 from maize
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-2'-5'-DIPHOSPHATE, Aldose reductase, ...
Authors:Giuseppe, P.O, Santos, M.L, Sousa, S.M, Koch, K.E, Yunes, J.A, Aparicio, R, Murakami, M.T.
Deposit date:2016-04-20
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:A comparative structural analysis reveals distinctive features of co-factor binding and substrate specificity in plant aldo-keto reductases.
Biochem.Biophys.Res.Commun., 474, 2016
4NHI
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BU of 4nhi by Molmil
Crystal structure of Hen egg-white lysozyme in Tris buffer at pH 7.5 with Magnesium formate
Descriptor: Lysozyme C
Authors:Lim, H, Rho, J, Hyun, J.K, Kim, Y.J.
Deposit date:2013-11-05
Release date:2014-11-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Crystal structure of Hen egg-white lysozyme in Tris buffer at pH 7.5 with Magnesium formate
To be Published
6II0
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BU of 6ii0 by Molmil
Crystal structure of the Makes Caterpillars Floppy (MCF)-Like effector of Vibrio vulnificus MO6-24/O
Descriptor: GLYCEROL, Putative RTX-toxin
Authors:Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyun, J, Lee, C, Eom, S.H, Kim, M.H.
Deposit date:2018-10-03
Release date:2019-08-07
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
7DKF
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BU of 7dkf by Molmil
Activity optimized supercomplex state4
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-24
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (8.3 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
7DGR
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BU of 7dgr by Molmil
Activity optimized supercomplex state2
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
7DGZ
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BU of 7dgz by Molmil
Activity optimized complex I (closed form)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
7DH0
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BU of 7dh0 by Molmil
Activity optimized complex I (open form)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
7DGS
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BU of 7dgs by Molmil
Activity optimized supercomplex state3
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
5JH1
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BU of 5jh1 by Molmil
Crystal structure of the apo form of AKR4C7 from maize
Descriptor: Aldose reductase, AKR4C7
Authors:Giuseppe, P.O, Santos, M.L, Sousa, S.M, Koch, K.E, Yunes, J.A, Aparicio, R, Murakami, M.T.
Deposit date:2016-04-20
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A comparative structural analysis reveals distinctive features of co-factor binding and substrate specificity in plant aldo-keto reductases.
Biochem.Biophys.Res.Commun., 474, 2016
6KF9
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BU of 6kf9 by Molmil
Cryo-EM structure of Thermococcus kodakarensis RNA polymerase
Descriptor: DNA (27-MER), DNA (5'-D(P*TP*CP*GP*GP*TP*AP*AP*TP*CP*AP*CP*GP*CP*TP*CP*C)-3'), DNA-directed RNA polymerase subunit, ...
Authors:Jun, S.-H, Hyun, J, Jeong, H, Cha, J.S, Kim, H, Bartlett, M.S, Cho, H.-S, Murakami, K.S.
Deposit date:2019-07-07
Release date:2020-07-01
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.79 Å)
Cite:Direct binding of TFE alpha opens DNA binding cleft of RNA polymerase.
Nat Commun, 11, 2020
6KF3
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BU of 6kf3 by Molmil
Cryo-EM structure of Thermococcus kodakarensis RNA polymerase
Descriptor: DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit A'', DNA-directed RNA polymerase subunit D, ...
Authors:Jun, S.-H, Hyun, J, Jeong, H, Cha, J.S, Kim, H, Bartlett, M.S, Cho, H.-S, Murakami, K.S.
Deposit date:2019-07-06
Release date:2020-07-01
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Direct binding of TFE alpha opens DNA binding cleft of RNA polymerase.
Nat Commun, 11, 2020
3TIR
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BU of 3tir by Molmil
Pseudo-atomic model of the Rous Sarcoma Virus capsid hexamer
Descriptor: Rous Sarcoma Virus Capsid Protein p27
Authors:Bailey, G.B, Hyun, J.K, Mitra, A.K, Kingston, R.L.
Deposit date:2011-08-21
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:A structural model for the generation of continuous curvature on the surface of a retroviral capsid.
J.Mol.Biol., 417, 2012
7VFH
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BU of 7vfh by Molmil
Cryo-EM structure of Vaccinia virus scaffolding protein D13 trimer sextet
Descriptor: Scaffold protein D13
Authors:Wolf, M, Hyun, J, Matsunami, H, Kim, T.G.
Deposit date:2021-09-13
Release date:2022-02-23
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Assembly mechanism of the pleomorphic immature poxvirus scaffold.
Nat Commun, 13, 2022
2CKA
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BU of 2cka by Molmil
Solution structures of the BRK domains of the human Chromo Helicase Domain 7 and 8, reveals structural similarity with GYF domain suggesting a role in protein interaction
Descriptor: CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 8
Authors:Ab, E, de Jong, R.N, Diercks, T, Xiaoyun, J, Daniels, M, Kaptein, R, Folkers, G.E.
Deposit date:2006-04-14
Release date:2007-05-08
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Solution Structures of the Brk Domains of the Human Chromo Helicase Domain 7 and 8, Reveals Structural Similarity with Gyf Domain Suggesting a Role in Protein Interaction
To be Published
2CKC
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BU of 2ckc by Molmil
Solution structures of the BRK domains of the human Chromo Helicase Domain 7 and 8, reveals structural similarity with GYF domain suggesting a role in protein interaction
Descriptor: CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 7
Authors:Ab, E, de Jong, R.N, Diercks, T, Xiaoyun, J, Daniels, M, Kaptein, R, Folkers, G.E.
Deposit date:2006-04-14
Release date:2007-05-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structures of the Brk Domains of the Human Chromo Helicase Domain 7 and 8, Reveals Structural Similarity with Gyf Domain Suggesting a Role in Protein Interaction
To be Published
7VFE
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BU of 7vfe by Molmil
Cryo-EM structure of Vaccinia virus scaffolding protein D13 with N-terminal polyhistidine tag
Descriptor: Scaffold protein D13
Authors:Wolf, M, Hyun, J, Matsunami, H, Kim, T.G.
Deposit date:2021-09-13
Release date:2022-02-23
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.63 Å)
Cite:Assembly mechanism of the pleomorphic immature poxvirus scaffold.
Nat Commun, 13, 2022
7VFD
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BU of 7vfd by Molmil
Cryo-EM structure of Vaccinia virus scaffolding protein D13
Descriptor: Scaffold protein D13
Authors:Wolf, M, Hyun, J, Matsunami, H, Kim, T.G.
Deposit date:2021-09-13
Release date:2022-02-23
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.25 Å)
Cite:Assembly mechanism of the pleomorphic immature poxvirus scaffold.
Nat Commun, 13, 2022
7VFF
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BU of 7vff by Molmil
Cryo-EM structure of Vaccinia virus scaffolding protein D13 with N-terminal 17 residue truncation
Descriptor: Scaffold protein D13
Authors:Wolf, M, Hyun, J, Matsunami, H, Kim, T.G.
Deposit date:2021-09-13
Release date:2022-02-23
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Assembly mechanism of the pleomorphic immature poxvirus scaffold.
Nat Commun, 13, 2022
7VFG
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BU of 7vfg by Molmil
Cryo-EM structure of Vaccinia virus scaffolding protein D13 trimer doublet
Descriptor: Scaffold protein D13
Authors:Wolf, M, Hyun, J, Matsunami, H, Kim, T.G.
Deposit date:2021-09-13
Release date:2022-02-23
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Assembly mechanism of the pleomorphic immature poxvirus scaffold.
Nat Commun, 13, 2022
2PLN
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BU of 2pln by Molmil
Crystal structure analysis of HP1043, an orphan resonse regulator of h. pylori
Descriptor: Response regulator
Authors:Lee, H.M, Kim, D.U, Byun, J.S, Cho, H.S.
Deposit date:2007-04-20
Release date:2007-05-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure Analysis of Hp1043, an Orphan Resonse Regulator of H. Pylori
To be Published
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数据于2024-10-09公开中

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