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PDB: 38 results

5VSN
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BU of 5vsn by Molmil
Crystal structure of mouse ryanodine receptor 2 SPRY2 domain (1080-1253) disease mutant P1124L
Descriptor: GLYCEROL, POTASSIUM ION, Ryanodine receptor 2
Authors:Yuchi, Z, Van Petegem, F.
Deposit date:2017-05-12
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.439 Å)
Cite:Cardiac hypertrophy and arrhythmia in mice induced by a mutation in ryanodine receptor 2.
JCI Insight, 5, 2019
5C33
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BU of 5c33 by Molmil
Crystal Structure of Mouse Ryanodine Receptor 2 SPRY1 Domain
Descriptor: CHLORIDE ION, ISOPROPYL ALCOHOL, Ryanodine receptor 2
Authors:Yuchi, Z, Van Petegem, F.
Deposit date:2015-06-16
Release date:2015-08-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Crystal structures of ryanodine receptor SPRY1 and tandem-repeat domains reveal a critical FKBP12 binding determinant.
Nat Commun, 6, 2015
5C30
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BU of 5c30 by Molmil
Crystal Structure of Rabbit Ryanodine Receptor 1 Repeat12 Domain
Descriptor: ISOPROPYL ALCOHOL, Ryanodine receptor 1
Authors:Yuchi, Z, Van Petegem, F.
Deposit date:2015-06-16
Release date:2015-08-05
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structures of ryanodine receptor SPRY1 and tandem-repeat domains reveal a critical FKBP12 binding determinant.
Nat Commun, 6, 2015
4ETV
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BU of 4etv by Molmil
Crystal structure of mouse ryanodine receptor 2 (2699-2904)
Descriptor: CHLORIDE ION, Ryanodine receptor 2
Authors:Yuchi, Z, Lau, K, Van Petegem, F.
Deposit date:2012-04-24
Release date:2012-06-13
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Disease mutations in the ryanodine receptor central region: crystal structures of a phosphorylation hot spot domain.
Structure, 20, 2012
4ESU
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BU of 4esu by Molmil
Crystal structure of rabbit ryanodine receptor 1 mutant S2776M
Descriptor: GLYCEROL, Ryanodine receptor 1
Authors:Yuchi, Z, Lau, K, Van Petegem, F.
Deposit date:2012-04-23
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Disease mutations in the ryanodine receptor central region: crystal structures of a phosphorylation hot spot domain.
Structure, 20, 2012
4ERT
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BU of 4ert by Molmil
Crystal structure of rabbit ryanodine receptor 1 (2734-2940)
Descriptor: GLYCEROL, POTASSIUM ION, Ryanodine receptor 1
Authors:Yuchi, Z, Lau, K, Van Petegem, F.
Deposit date:2012-04-20
Release date:2012-06-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Disease mutations in the ryanodine receptor central region: crystal structures of a phosphorylation hot spot domain.
Structure, 20, 2012
4ETT
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BU of 4ett by Molmil
Crystal structure of rabbit ryanodine receptor 1 mutant E2764K
Descriptor: GLYCEROL, Ryanodine receptor 1
Authors:Yuchi, Z, Lau, K, Van Petegem, F.
Deposit date:2012-04-24
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.195 Å)
Cite:Disease mutations in the ryanodine receptor central region: crystal structures of a phosphorylation hot spot domain.
Structure, 20, 2012
4ETU
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BU of 4etu by Molmil
Crystal structure of rabbit ryanodine receptor 1 mutant R2939S
Descriptor: GLYCEROL, Ryanodine receptor 1
Authors:Yuchi, Z, Lau, K, Van Petegem, F.
Deposit date:2012-04-24
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Disease mutations in the ryanodine receptor central region: crystal structures of a phosphorylation hot spot domain.
Structure, 20, 2012
4ERV
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BU of 4erv by Molmil
Crystal structure of human ryanodine receptor 3 (2597-2800)
Descriptor: GLYCEROL, Ryanodine receptor 3, SULFATE ION
Authors:Yuchi, Z, Lau, K, Van Petegem, F.
Deposit date:2012-04-20
Release date:2012-06-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Disease mutations in the ryanodine receptor central region: crystal structures of a phosphorylation hot spot domain.
Structure, 20, 2012
7DKI
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BU of 7dki by Molmil
Silk worm FKBP, isoform-1
Descriptor: GLYCEROL, Peptidylprolyl isomerase
Authors:Yuchi, Z, Nayak, B.C.
Deposit date:2020-11-24
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Silk worm FKBP, isoform-1
To Be Published
7Y1P
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BU of 7y1p by Molmil
CRYSTAL STRUCTURE OF THE RGS-HOMOLOGOUS DOMAIN OF AXIN IN COMPLEX WITH LZ-22Na
Descriptor: (2~{Z},4~{Z})-2-methyl-5-(8-oxidanyldibenzofuran-4-yl)penta-2,4-dienal, Axin-1
Authors:He, Z, Yuchi, Z.
Deposit date:2022-06-08
Release date:2023-12-13
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:CRYSTAL STRUCTURE OF THE RGS-HOMOLOGOUS DOMAIN OF AXIN IN COMPLEX WITH LZ-22Na
To Be Published
6LT9
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BU of 6lt9 by Molmil
The crystal structure of diamondback moth ryanodine receptor SPRY1 domain
Descriptor: GLYCEROL, Ryanodine receptor 1, SODIUM ION
Authors:Zhou, Y, Lin, L, Yuchi, Z.
Deposit date:2020-01-22
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:The crystal structure of diamondback moth ryanodine receptor SPRY1 domain
To Be Published
6LON
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BU of 6lon by Molmil
Crystal structure of HPSG
Descriptor: (2~{S})-2,3-bis(oxidanyl)propane-1-sulfonic acid, GLYCEROL, PFL2/glycerol dehydratase family glycyl radical enzyme, ...
Authors:Liu, J, Zhang, Y, Yuchi, Z.
Deposit date:2020-01-06
Release date:2020-06-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Two radical-dependent mechanisms for anaerobic degradation of the globally abundant organosulfur compound dihydroxypropanesulfonate.
Proc.Natl.Acad.Sci.USA, 117, 2020
6M2W
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BU of 6m2w by Molmil
Structure of RyR1 (Ca2+/Caffeine/ATP/CaM1234/CHL)
Descriptor: 5-bromanyl-N-[4-chloranyl-2-methyl-6-(methylcarbamoyl)phenyl]-2-(3-chloranylpyridin-2-yl)pyrazole-3-carboxamide, ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, ...
Authors:Ma, R, Haji-Ghassemi, O, Ma, D, Lin, L, Samurkas, A, Van Petegem, F, Yuchi, Z.
Deposit date:2020-03-01
Release date:2020-09-02
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis for diamide modulation of ryanodine receptor.
Nat.Chem.Biol., 16, 2020
6LQK
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BU of 6lqk by Molmil
Crystal structure of honeybee RyR NTD
Descriptor: MAGNESIUM ION, ryanodine receptor
Authors:Zhou, Y, Lin, L, Yuchi, Z.
Deposit date:2020-01-13
Release date:2021-01-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Crystal structure of the N-terminal domain of ryanodine receptor from the honeybee, Apis mellifera.
Insect Biochem.Mol.Biol., 125, 2020
5YMR
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BU of 5ymr by Molmil
The Crystal Structure of IseG
Descriptor: 2-hydroxyethylsulfonic acid, Formate acetyltransferase, GLYCEROL
Authors:Lin, L, Zhang, J, Xing, M, Hua, G, Guo, C, Hu, Y, Wei, Y, Ang, E, Zhao, H, Zhang, Y, Yuchi, Z.
Deposit date:2017-10-22
Release date:2019-03-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Radical-mediated C-S bond cleavage in C2 sulfonate degradation by anaerobic bacteria.
Nat Commun, 10, 2019
5Y9V
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BU of 5y9v by Molmil
Crystal structure of diamondback moth ryanodine receptor N-terminal domain
Descriptor: CHLORIDE ION, GLYCEROL, Ryanodine receptor 1
Authors:Lin, L, Yuchi, Z.
Deposit date:2017-08-28
Release date:2017-12-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.841 Å)
Cite:Crystal structure of ryanodine receptor N-terminal domain from Plutella xylostella reveals two potential species-specific insecticide-targeting sites.
Insect Biochem. Mol. Biol., 92, 2017
7VUA
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BU of 7vua by Molmil
Anaerobic hydroxyproline degradation involving C-N cleavage by a glycyl radical enzyme
Descriptor: (4S)-4-hydroxy-D-proline, HplG
Authors:Duan, Y, Lu, Q, Yuchi, Z, Zhang, Y.
Deposit date:2021-11-01
Release date:2022-06-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.695 Å)
Cite:Anaerobic Hydroxyproline Degradation Involving C-N Cleavage by a Glycyl Radical Enzyme.
J.Am.Chem.Soc., 144, 2022
8XJI
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BU of 8xji by Molmil
Structure of chimeric RyR complex with flubendiamide
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ...
Authors:Lin, L, Wang, C, Wang, W, Jiang, H, Yuchi, Z.
Deposit date:2023-12-21
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.91 Å)
Cite:Cryo-EM structures of ryanodine receptors and diamide insecticides reveal the mechanisms of selectivity and resistance.
Nat Commun, 15, 2024
8XKH
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BU of 8xkh by Molmil
Structure of chimeric RyR Complex with tetraniliprole
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ...
Authors:Lin, L, Wang, C, Wang, W, Jiang, H, Yuchi, Z.
Deposit date:2023-12-23
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Cryo-EM structures of ryanodine receptors and diamide insecticides reveal the mechanisms of selectivity and resistance.
Nat Commun, 15, 2024
8XLF
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BU of 8xlf by Molmil
Structure of chimeric RyR
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ...
Authors:Lin, L, Wang, C, Wang, W, Jiang, H, Yuchi, Z.
Deposit date:2023-12-25
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Cryo-EM structures of ryanodine receptors and diamide insecticides reveal the mechanisms of selectivity and resistance.
Nat Commun, 15, 2024
8XLH
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BU of 8xlh by Molmil
Structure of chimeric RyR-I4657M/G4819E
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ...
Authors:Lin, L, Wang, C, Wang, W, Jiang, H, Yuchi, Z.
Deposit date:2023-12-26
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Cryo-EM structures of ryanodine receptors and diamide insecticides reveal the mechanisms of selectivity and resistance.
Nat Commun, 15, 2024
7E11
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BU of 7e11 by Molmil
Crystal structure of PKAc-PLN R9C complex
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PLN, ...
Authors:Qin, J, Lin, L, Yuchi, Z.
Deposit date:2021-01-28
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.43 Å)
Cite:Structures of PKA-phospholamban complexes reveal a mechanism of familial dilated cardiomyopathy.
Elife, 11, 2022
7E0Z
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BU of 7e0z by Molmil
Crystal structure of PKAc-PLN complex
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PLN, ...
Authors:Qin, J, Yuchi, Z.
Deposit date:2021-01-28
Release date:2022-04-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.162 Å)
Cite:Structures of PKA-phospholamban complexes reveal a mechanism of familial dilated cardiomyopathy.
Elife, 11, 2022
8Y40
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BU of 8y40 by Molmil
Structure of chimeric RyR-I4657M/G4819E complex with chlorantraniliprole
Descriptor: 5-bromanyl-N-[4-chloranyl-2-methyl-6-(methylcarbamoyl)phenyl]-2-(3-chloranylpyridin-2-yl)pyrazole-3-carboxamide, ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, ...
Authors:Lin, L, Wang, C, Wang, W, Jiang, H, Yuchi, Z.
Deposit date:2024-01-29
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Cryo-EM structures of ryanodine receptors and diamide insecticides reveal the mechanisms of selectivity and resistance.
Nat Commun, 15, 2024

 

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