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PDB: 97 results

7RYH
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BU of 7ryh by Molmil
A. baumannii Ribosome-TP-6076 complex: Empty 70S
Descriptor: (4S,4aS,5aR,12aS)-4-(diethylamino)-3,10,12,12a-tetrahydroxy-1,11-dioxo-8-[(2S)-pyrrolidin-2-yl]-7-(trifluoromethyl)-1,4,4a,5,5a,6,11,12a-octahydrotetracene-2-carboxamide, 16S Ribosomal RNA, 23S ribosomal RNA, ...
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2021-08-25
Release date:2022-02-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.43 Å)
Cite:An Analysis of the Novel Fluorocycline TP-6076 Bound to Both the Ribosome and Multidrug Efflux Pump AdeJ from Acinetobacter baumannii.
Mbio, 13, 2022
4K7R
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BU of 4k7r by Molmil
Crystal structures of CusC review conformational changes accompanying folding and transmembrane channel formation
Descriptor: (2S)-1-(pentanoyloxy)propan-2-yl hexanoate, Cation efflux system protein CusC
Authors:Su, C.-C, Lei, H.-T, Bolla, J.R, Yu, E.W.
Deposit date:2013-04-17
Release date:2013-10-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.094 Å)
Cite:Crystal Structures of CusC Review Conformational Changes Accompanying Folding and Transmembrane Channel Formation.
J.Mol.Biol., 426, 2014
4NB5
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BU of 4nb5 by Molmil
Crystal Structure of a transcriptional regulator
Descriptor: 1,3-dihydroxypropan-2-yl octadecanoate, DNA binding protein
Authors:Su, C.-C, Radhakrishnan, A, Yu, E.W.
Deposit date:2013-10-22
Release date:2014-04-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.641 Å)
Cite:Crystal Structure of the Transcriptional Regulator Rv0678 of Mycobacterium tuberculosis.
J.Biol.Chem., 289, 2014
6V3A
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BU of 6v3a by Molmil
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
Descriptor: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2019-11-25
Release date:2020-02-05
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Cryo-electron Microscopy Structure of the Acinetobacter baumannii 70S Ribosome and Implications for New Antibiotic Development.
Mbio, 11, 2020
6V3D
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BU of 6v3d by Molmil
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit
Descriptor: 23s ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2019-11-25
Release date:2020-02-05
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Cryo-electron Microscopy Structure of the Acinetobacter baumannii 70S Ribosome and Implications for New Antibiotic Development.
Mbio, 11, 2020
6V3B
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BU of 6v3b by Molmil
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state
Descriptor: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2019-11-25
Release date:2020-02-05
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Cryo-electron Microscopy Structure of the Acinetobacter baumannii 70S Ribosome and Implications for New Antibiotic Development.
Mbio, 11, 2020
6WU6
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BU of 6wu6 by Molmil
succinate-coenzyme Q reductase
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Lyu, M, Su, C.-C, Morgan, C.E, Yu, E.W.
Deposit date:2020-05-04
Release date:2021-02-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins.
Nat.Methods, 18, 2021
6WTZ
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BU of 6wtz by Molmil
Cryo-EM structure of E. Coli OmpF
Descriptor: Outer membrane porin F
Authors:Morgan, C.E, Su, C.-C, Lyu, M, Yu, E.W.
Deposit date:2020-05-04
Release date:2021-01-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins.
Nat.Methods, 18, 2021
6WU0
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BU of 6wu0 by Molmil
CryoEM structure of Burkholderia pseudomallei hopanoid biosynthesis-associated RND transporter HpnN
Descriptor: Hopanoid biosynthesis associated RND transporter like protein HpnN
Authors:Lyu, M, Yu, E.W.
Deposit date:2020-05-04
Release date:2021-02-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins.
Nat.Methods, 18, 2021
4R0C
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BU of 4r0c by Molmil
Crystal structure of the Alcanivorax borkumensis YdaH transporter reveals an unusual topology
Descriptor: AbgT putative transporter family, DODECYL-BETA-D-MALTOSIDE, SODIUM ION, ...
Authors:Su, C.-C, Bolla, J.R, Yu, E.W.
Deposit date:2014-07-30
Release date:2015-04-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.963 Å)
Cite:Crystal structure of the Alcanivorax borkumensis YdaH transporter reveals an unusual topology.
Nat Commun, 6, 2015
4R1I
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BU of 4r1i by Molmil
Structure and Function of Neisseria gonorrhoeae MtrF Illuminates a Class of Antimetabolite Efflux Pumps
Descriptor: Aminobenzoyl-glutamate transporter
Authors:Su, C.-C, Bolla, J.R, Yu, E.W.
Deposit date:2014-08-06
Release date:2015-04-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.959 Å)
Cite:Structure and Function of Neisseria gonorrhoeae MtrF Illuminates a Class of Antimetabolite Efflux Pumps.
Cell Rep, 11, 2015
2HQF
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BU of 2hqf by Molmil
Conformation of the AcrB Multidrug Efflux Pump in Mutants of the Putative Proton Relay Pathway
Descriptor: Acriflavine resistance protein B
Authors:Su, C.-C, Li, M, Gu, R, Takatsuka, Y, McDermott, G, Nikaido, H, Yu, E.W.
Deposit date:2006-07-18
Release date:2007-04-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:Conformation of the AcrB multidrug efflux pump in mutants of the putative proton relay pathway
J.Bacteriol., 188, 2006
3QPS
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BU of 3qps by Molmil
Crystal structures of CmeR-bile acid complexes from Campylobacter jejuni
Descriptor: CHOLIC ACID, CmeR
Authors:Lei, H.T, Routh, M.D, Shen, Z, Su, C.C, Zhang, Q, Yu, E.W.
Deposit date:2011-02-14
Release date:2011-03-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.351 Å)
Cite:Crystal structures of CmeR-bile acid complexes from Campylobacter jejuni.
Protein Sci., 20, 2011
2HQC
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BU of 2hqc by Molmil
Conformation of the AcrB Multidrug Efflux Pump in Mutants of the Putative Proton Relay Pathway
Descriptor: Acriflavine resistance protein B
Authors:Su, C.-C, Li, M, Gu, R, Takatsuka, Y, McDermott, G, Nikaido, H, Yu, E.W.
Deposit date:2006-07-18
Release date:2007-04-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.56 Å)
Cite:Conformation of the AcrB multidrug efflux pump in mutants of the putative proton relay pathway
J.Bacteriol., 188, 2006
3QQA
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BU of 3qqa by Molmil
Crystal structures of CmeR-bile acid complexes from Campylobacter jejuni
Descriptor: CmeR, TAUROCHOLIC ACID
Authors:Lei, H.T, Routh, M.D, Shen, Z, Su, C.-C, Zhang, Q, Yu, E.W.
Deposit date:2011-02-15
Release date:2011-03-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of CmeR-bile acid complexes from Campylobacter jejuni.
Protein Sci., 20, 2011
2HQG
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BU of 2hqg by Molmil
Conformation of the AcrB Multidrug Efflux Pump in Mutants of the Putative Proton Relay Pathway
Descriptor: Acriflavine resistance protein B
Authors:Su, C.-C, Li, M, Gu, R, Takatsuka, Y, McDermott, G, Nikaido, H, Yu, E.W.
Deposit date:2006-07-18
Release date:2007-04-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:Conformation of the AcrB multidrug efflux pump in mutants of the putative proton relay pathway
J.Bacteriol., 188, 2006
2HQD
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BU of 2hqd by Molmil
Conformation of the AcrB Multidrug Efflux Pump in Mutants of the Putative Proton Relay Pathway
Descriptor: Acriflavine resistance protein B
Authors:Su, C.-C, Li, M, Gu, R, Takatsuka, Y, McDermott, G, Nikaido, H, Yu, E.W.
Deposit date:2006-07-18
Release date:2007-04-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Conformation of the AcrB multidrug efflux pump in mutants of the putative proton relay pathway
J.Bacteriol., 188, 2006
3T6N
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BU of 3t6n by Molmil
Crystal Structure of Transcriptional Regulator
Descriptor: Transcriptional regulator
Authors:Do, S.V, Bolla, J.R, Chen, X, Yu, E.W.
Deposit date:2011-07-28
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.314 Å)
Cite:Crystal Structure of the Rv3066 Transcriptional Regulator from Mycobacterium tuberculosis
To be Published
3T53
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BU of 3t53 by Molmil
Crystal structures of the extrusion state of the CusBA adaptor-transporter complex
Descriptor: COPPER (II) ION, Cation efflux system protein CusA, Cation efflux system protein CusB
Authors:Su, C.-C, Long, F, Yu, E.W.
Deposit date:2011-07-26
Release date:2012-06-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.37 Å)
Cite:Charged Amino Acids (R83, E567, D617, E625, R669, and K678) of CusA Are Required for Metal Ion Transport in the Cus Efflux System.
J.Mol.Biol., 422, 2012
3T51
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BU of 3t51 by Molmil
Crystal structures of the pre-extrusion and extrusion states of the CusBA adaptor-transporter complex
Descriptor: COPPER (II) ION, Cation efflux system protein CusA, Cation efflux system protein CusB
Authors:Su, C.-C, Long, F, Yu, E.W.
Deposit date:2011-07-26
Release date:2012-06-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Charged Amino Acids (R83, E567, D617, E625, R669, and K678) of CusA Are Required for Metal Ion Transport in the Cus Efflux System.
J.Mol.Biol., 422, 2012
9DP6
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BU of 9dp6 by Molmil
Mycolicibacterium smegmatis MmpL5-AcpM structure
Descriptor: 4'-PHOSPHOPANTETHEINE, Meromycolate extension acyl carrier protein, MmpL5 protein
Authors:Maharjan, R, Klenotic, P.A, Zhang, Z, Yu, E.W.
Deposit date:2024-09-20
Release date:2024-10-23
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Mycolicibacterium smegmatis MmpL5-AcpM structure
To Be Published
9B43
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BU of 9b43 by Molmil
Mycolicibacterium smegmatis MmpL4 structure
Descriptor: MmpL4 protein
Authors:Maharjan, R, Klenotic, P.A, Zhang, Z, Yu, E.W.
Deposit date:2024-03-20
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Mycolicibacterium smegmatis MmpL4 structure
To Be Published
9B46
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BU of 9b46 by Molmil
Mycolicibacterium smegmatis MmpL5 structure
Descriptor: MmpL5 protein
Authors:Maharjan, R, Klenotic, P.A, Zhang, Z, Yu, E.W.
Deposit date:2024-03-20
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Mycolicibacterium smegmatis MmpL4 structure
To Be Published
7KGH
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BU of 7kgh by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-II
Descriptor: ETHIDIUM, Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.79 Å)
Cite:Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
7KGE
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BU of 7kge by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-II
Descriptor: Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021

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PDB entries from 2024-11-20

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