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PDB: 2430 results

2H0A
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Crystal structure of probable Transcription regulator from Thermus thermophilus
Descriptor: Transcriptional regulator
Authors:Kumarevel, T.S, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-14
Release date:2007-05-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of TTHA0807, a CcpA regulator, from Thermus thermophilus HB8.
Proteins, 2009
2GQJ
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Solution structure of the two zf-C2H2 like domains(493-575) of human zinc finger protein KIAA1196
Descriptor: ZINC ION, Zinc finger protein KIAA1196
Authors:Kurosaki, C, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-21
Release date:2006-10-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the two zf-C2H2 like domains(493-575) of human zinc finger protein KIAA1196
To be Published
2HOQ
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Crystal structure of the probable haloacid dehalogenase (PH1655) from pyrococcus horikoshii OT3
Descriptor: Putative HAD-hydrolase PH1655
Authors:Jeyakanthan, J, Shinkai, A, Yokoyama, S, Shiro, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-16
Release date:2007-07-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the Probable Haloacid Dehalogenase Protein (Ph1655) from Pyrococcus Horikoshii OT3
To be Published
2IY6
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1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE FROM THERMUS WITH BOUND CITRATE
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE, ...
Authors:Inagaki, E, Sakamoto, K, Nishio, M, Yokoyama, S.
Deposit date:2006-07-13
Release date:2006-07-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Thermus Thermophilus Delta(1)- Pyrroline-5-Carboxylate Dehydrogenase.
J.Mol.Biol., 362, 2006
2J5N
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1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE FROM THERMUS THERMOPHIRUS WITH BOUND INHIBITOR GLYCINE AND NAD.
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE, ...
Authors:Inagaki, E, Sakamoto, K, Nishio, M, Yokoyama, S.
Deposit date:2006-09-19
Release date:2007-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal Structure of Ternary Complex of Delta1-Pyrroline-5-Carboxylate Dehydrogenase with Substrate Mimic and Co-Factoer
To be Published
2J40
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1-pyrroline-5-carboxylate dehydrogenase from Thermus thermophilus with bound inhibitor L-proline and NAD.
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE, ...
Authors:Inagaki, E, Sakamoto, K, Nishio, M, Yokoyama, S.
Deposit date:2006-08-24
Release date:2007-10-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Ternary Complex of Delta1-Pyrroline-5-Carboxylate Dehydrogenase with Substrate Mimic and Co-Factoer
To be Published
2IC7
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BU of 2ic7 by Molmil
Crystal Structure of Maltose Transacetylase from Geobacillus kaustophilus
Descriptor: Maltose transacetylase
Authors:Liu, Z.J, Li, Y, Chen, L, Zhu, J, Rose, J.P, Ebihara, A, Yokoyama, S, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-12
Release date:2006-11-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal Structure of Maltose Transacetylase From Geobacillus kaustophilus at 1.78 Angstrom Resolution
To be Published
2ICU
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Crystal Structure of Hypothetical Protein YedK From Escherichia coli
Descriptor: Hypothetical protein yedK
Authors:Chen, L, Liu, Z.J, Li, Y, Zhao, M, Rose, J, Ebihara, A, Yokoyama, S, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-13
Release date:2006-11-07
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Hypothetical Protein YedK From Escherichia coli
To be Published
2JNS
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Solution structure of the Bromodomain-containing protein 4 ET domain
Descriptor: Bromodomain-containing protein 4
Authors:Lin, Y.J, Padmanabhan, B, Yokoyama, S, Guntert, P, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-01
Release date:2008-02-05
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution structure of the Bromodomain-containing protein 4 ET domain
To be Published
2H9U
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Crystal structure of the archaea specific DNA binding protein
Descriptor: 1,2-ETHANEDIOL, DNA/RNA-binding protein Alba 2
Authors:Kumarevel, T.S, Sakamoto, K, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-06-12
Release date:2007-06-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the archaea specific DNA binding protein from Aeropyrum pernix K1
To be Published
2KBO
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Structure, interaction, and real-time monitoring of the enzymatic reaction of wild type APOBEC3G
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, ZINC ION
Authors:Furukawa, A, Nagata, T, Matsugami, A, Habu, Y, Sugiyama, R, Hayashi, F, Kobayashi, N, Yokoyama, S, Takaku, H, Katahira, M.
Deposit date:2008-12-04
Release date:2009-02-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure, interaction and real-time monitoring of the enzymatic reaction of wild-type APOBEC3G
Embo J., 28, 2009
2HOW
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BU of 2how by Molmil
Dipeptidase (PH0974) from Pyrococcus horikoshii OT3
Descriptor: 356aa long hypothetical dipeptidase
Authors:Jeyakanthan, J, Yokoyama, S, Shiro, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-17
Release date:2007-09-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Dipeptidase (PH0974) from Pyrococcus Horikoshii Ot3
To be Published
2GQH
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BU of 2gqh by Molmil
Solution structure of the 15th Ig-like domain of human KIAA1556 protein
Descriptor: KIAA1556 protein
Authors:Kurosaki, C, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-21
Release date:2006-10-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 15th Ig-like domain of human KIAA1556 protein
To be Published
2GQI
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BU of 2gqi by Molmil
Solution structure of the SH3 domain of human Ras GTPase-activating protein 1
Descriptor: Ras GTPase-activating protein 1
Authors:Kurosaki, C, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-21
Release date:2006-10-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the SH3 domain of human Ras GTPase-activating protein 1
To be Published
2FYH
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BU of 2fyh by Molmil
Solution structure of the 2'-5' RNA ligase-like protein from Pyrococcus furiosus
Descriptor: putative integral membrane transport protein
Authors:Okada, K, Matsuda, T, Sakamoto, T, Muto, Y, Yokoyama, S, Kanai, A, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-08
Release date:2007-02-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Characterization of a heat-stable enzyme possessing GTP-dependent RNA ligase activity from a hyperthermophilic archaeon, Pyrococcus furiosus
Rna, 15, 2009
1WEP
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BU of 1wep by Molmil
Solution structure of PHD domain in PHF8
Descriptor: PHF8, ZINC ION
Authors:He, F, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-25
Release date:2004-11-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of PHD domain in protein AA017385
To be Published
1WF5
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BU of 1wf5 by Molmil
Solution structure of the first Fn3 domain of Sidekick-2 protein
Descriptor: sidekick 2 protein
Authors:Qin, X, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-26
Release date:2005-06-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the first Fn3 domain of Sidekick-2 protein
To be published
1WG0
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BU of 1wg0 by Molmil
Structural comparison of Nas6p protein structures in two different crystal forms
Descriptor: Probable 26S proteasome regulatory subunit p28
Authors:Nakamura, Y, Umehara, T, Tanaka, A, Horikoshi, M, Yokoyama, S, Padmanabhan, B, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-27
Release date:2005-06-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Structural comparison of Nas6p protein structures in two different crystal forms
To be Published
1WF9
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Solution structure of a novel beta-grasp fold like domain of Hypothetical protein (Arabidopsis thaliana)
Descriptor: NPL4 family protein
Authors:Qin, X, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-26
Release date:2005-06-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of a novel beta-grasp fold like domain of Hypothetical protein (Arabidopsis thaliana)
To be Published
1WFD
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BU of 1wfd by Molmil
Solution structure of mouse MIT domain
Descriptor: Hypothetical protein 1500032H18
Authors:Suetake, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-26
Release date:2004-11-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of mouse MIT domain
to be published
1WGY
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BU of 1wgy by Molmil
RA domain of guanine nucleotide exchange factor for Rap1
Descriptor: Rap guanine nucleotide exchange factor 5
Authors:Nagashima, T, Tochio, N, Kigawa, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:RA domain of guanine nucleotide exchange factor for Rap1
TO BE PUBLISHED
1WI4
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BU of 1wi4 by Molmil
Solution structure of the PDZ domain of syntaxin binding protein 4
Descriptor: syntaxin binding protein 4
Authors:Endo, H, Tomizawa, T, Kigawa, T, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2005-06-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the PDZ domain of syntaxin binding protein 4
To be published
1WJ0
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Solution Structure of the DNA-Binding Domain of Squamosa Promoter Binding Protein-Like 12 Lacking the Second Zinc-Binding Site
Descriptor: ZINC ION, squamosa promoter-binding protein-like 12
Authors:Yamasaki, K, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of the SBP Domain That Lacks the Second Zinc-Binding Site
To be Published
2RPP
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BU of 2rpp by Molmil
Solution structure of Tandem zinc finger domain 12 in Muscleblind-like protein 2
Descriptor: Muscleblind-like protein 2, ZINC ION
Authors:Abe, C, Dang, W, Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-06-24
Release date:2009-05-12
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RNA binding domain in the human muscleblind-like protein 2
Protein Sci., 18, 2009
1WD6
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crystal structure of JW1657 from Escherichia coli
Descriptor: Protein ydhR
Authors:Kato-Murayama, M, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-12
Release date:2004-11-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:crystal structure of JW1657 from Escherichia coli
To be Published

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