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PDB: 2430 results

2Z0P
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Crystal structure of PH domain of Bruton's tyrosine kinase
Descriptor: (2R)-3-{[(S)-{[(2S,3R,5S,6S)-2,6-DIHYDROXY-3,4,5-TRIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-(1-HYDROXY BUTOXY)PROPYL BUTYRATE, Tyrosine-protein kinase BTK, ZINC ION
Authors:Murayama, K, Kato-Murayama, M, Mishima, C, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Crystal structure of the Bruton's tyrosine kinase PH domain with phosphatidylinositol
Biochem.Biophys.Res.Commun., 377, 2008
2YUF
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Solution structure of the NCD2 domain in human transcriptional repressor Nab1 protein
Descriptor: NGFI-A-binding protein 1
Authors:Saito, K, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2008-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the NCD2 domain in human transcriptional repressor Nab1 protein
To be Published
2YY3
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Crystal Structure of translation elongation factor EF-1 beta from Pyrococcus horikoshii
Descriptor: Elongation factor 1-beta
Authors:Ishii, T, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-27
Release date:2007-10-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of translation elongation factor EF-1 beta from Pyrococcus horikoshii
To be Published
2YQM
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Solution structure of the FYVE domain in zinc finger FYVE domain-containing protein 12
Descriptor: RUN and FYVE domain-containing protein 1, ZINC ION
Authors:He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the FYVE domain in zinc finger FYVE domain-containing protein 12
To be Published
2YXB
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Crystal structure of the methylmalonyl-CoA mutase alpha-subunit from Aeropyrum pernix
Descriptor: Coenzyme B12-dependent mutase
Authors:Handa, N, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-25
Release date:2007-10-30
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the methylmalonyl-CoA mutase alpha-subunit from Aeropyrum pernix
To be Published
2YR0
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Crystal Structure of Hypothetical Methyltransferase TTHA0223 from Thermus thermophilus HB8
Descriptor: Hypothetical protein TTHA0223
Authors:Kagawa, W, Kurumizaka, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-01
Release date:2007-10-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Hypothetical Methyltransferase TTHA0223 from Thermus thermophilus HB8
To be published
2YRH
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Solution structure of the C2H2-type zinc finger domain (699-729) from zinc finger protein 473
Descriptor: ZINC ION, Zinc finger protein 473
Authors:Qin, X.R, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the C2H2-type zinc finger domain (699-729) from zinc finger protein 473
To be Published
2YSL
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BU of 2ysl by Molmil
Solution structure of the RING domain (1-66) from tripartite motif-containing protein 31
Descriptor: Tripartite motif-containing protein 31, ZINC ION
Authors:Qin, X.R, Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RING domain (1-66) from tripartite motif-containing protein 31
To be Published
2YTB
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BU of 2ytb by Molmil
Solution structure of C2H2 type Zinc finger domain 5 in Zinc finger protein 32
Descriptor: ZINC ION, Zinc finger protein 32
Authors:Kasahara, N, Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of C2H2 type Zinc finger domain 5 in Zinc finger protein 32
To be Published
2Z0U
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BU of 2z0u by Molmil
Crystal structure of C2 domain of KIBRA protein
Descriptor: WW domain-containing protein 1
Authors:Murayama, K, Kato-Murayama, M, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of C2 domain of KIBRA protein
To be Published
2YU6
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Solution structure of the YTH domain in YTH domain-containing protein 2
Descriptor: YTH domain-containing protein 2
Authors:Endo, R, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Tarada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the YTH domain in YTH domain-containing protein 2
To be Published
2YVI
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Crystal structure of a death domain of human ankryn protein
Descriptor: Ankyrin-1, GLYCEROL
Authors:Ihsanawati, Bessho, Y, Chen, L, Liu, Z.J, Wang, B.C, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-12
Release date:2008-04-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of a death domain of human ankryn protein
To be Published
2Z0T
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Crystal structure of hypothetical protein PH0355
Descriptor: Putative uncharacterized protein PH0355
Authors:Murayama, K, Takemoto, C, Kato-Murayama, M, Kawazoe, M, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of hypothetical protein PH0355
To be Published
2YYZ
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Crystal structure of Sugar ABC transporter, ATP-binding protein
Descriptor: DI(HYDROXYETHYL)ETHER, SULFATE ION, Sugar ABC transporter, ...
Authors:Ethayathullah, A.S, Bessho, Y, Padmanabhan, B, Singh, T.P, Kaur, P, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-02
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal structure of Sugar ABC transporter, ATP-binding protein
To be Published
2YXY
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BU of 2yxy by Molmil
Crystarl structure of Hypothetical conserved protein, GK0453
Descriptor: Hypothetical conserved protein, GK0453
Authors:Nakamu, Y, Bessho, Y, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-27
Release date:2007-10-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the hypothetical DUF1811-family protein GK0453 from Geobacillus kaustophilus HTA426
Acta Crystallogr.,Sect.F, 69, 2013
2YY5
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Crystal Structure of tryptophanyl-tRNA synthetase from Mycoplasma pneumoniae
Descriptor: 5'-O-[(L-TRYPTOPHYLAMINO)SULFONYL]ADENOSINE, SULFATE ION, Tryptophanyl-tRNA synthetase
Authors:Ishii, T, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-27
Release date:2008-04-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal Structure of tryptophanyl-tRNA synthetase from Mycoplasma pneumoniae
To be Published
2YXE
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BU of 2yxe by Molmil
Crystal structure of L-isoaspartyl protein carboxyl methyltranferase
Descriptor: ACETATE ION, Protein-L-isoaspartate O-methyltransferase
Authors:Padmanabhan, B, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-26
Release date:2007-10-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of L-isoaspartyl protein carboxyl methyltranferase
To be Published
2Z0R
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BU of 2z0r by Molmil
Crystal structure of hypothetical protein TTHA0547
Descriptor: CHLORIDE ION, Putative uncharacterized protein TTHA0547, SULFATE ION
Authors:Murayama, K, Kato-Murayama, M, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of hypothetical protein TTHA0547
to be published
2Z0S
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BU of 2z0s by Molmil
Crystal structure of putative exosome complex RNA-binding protein
Descriptor: Probable exosome complex RNA-binding protein 1
Authors:Murayama, K, Kato-Murayama, M, Takemoto, C, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of putative exosome complex RNA-binding protein
To be Published
2Z0Q
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BU of 2z0q by Molmil
Crystal structure of DH-PH domain of RhoGEF3(Xpln)
Descriptor: Rho guanine nucleotide exchange factor 3, SULFATE ION
Authors:Murayama, K, Kato-Murayama, M, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2012-12-12
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structure of the Rho-specific guanine nucleotide-exchange factor Xpln
Acta Crystallogr.,Sect.F, 68, 2012
2Z32
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Crystal structure of Keap1 complexed with Prothymosin alpha
Descriptor: Kelch-like ECH-associated protein 1, Prothymosin alpha, SULFATE ION
Authors:Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-31
Release date:2008-03-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis of the complex of Keap1 with a prothymosin alpha peptide
Acta Crystallogr.,Sect.F, 64, 2008
2ZIN
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BU of 2zin by Molmil
Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with BocLys and an ATP analogue
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, N~6~-(tert-butoxycarbonyl)-L-lysine, ...
Authors:Yanagisawa, T, Ishii, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-02-19
Release date:2008-12-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Multistep Engineering of Pyrrolysyl-tRNA Synthetase to Genetically Encode N(varepsilon)-(o-Azidobenzyloxycarbonyl) lysine for Site-Specific Protein Modification
Chem.Biol., 15, 2008
2ZCE
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BU of 2zce by Molmil
Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with pyrrolysine and an ATP analogue
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PYRROLYSINE, ...
Authors:Yanagisawa, T, Ishii, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-11-08
Release date:2008-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic Studies on Multiple Conformational States of Active-site Loops in Pyrrolysyl-tRNA Synthetase
J.Mol.Biol., 378, 2008
5H56
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ADP and dTDP bound Crystal structure of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, ...
Authors:Biswas, A, Jeyakanthan, J, Sekar, K, Kuramitsu, S, Yokoyama, S.
Deposit date:2016-11-04
Release date:2017-06-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural studies of a hyperthermophilic thymidylate kinase enzyme reveal conformational substates along the reaction coordinate
FEBS J., 284, 2017
3IEK
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BU of 3iek by Molmil
Crystal Structure of native TTHA0252 from Thermus thermophilus HB8
Descriptor: CITRATE ANION, Ribonuclease TTHA0252, SULFATE ION, ...
Authors:Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R.
Deposit date:2009-07-22
Release date:2010-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal Structure of native TTHA0252 from Thermus thermophilus HB8
To be Published

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