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PDB: 101 件
5WYJ
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BU of 5wyj by Molmil
Cryo-EM structure of the 90S small subunit pre-ribosome (Dhr1-depleted, Enp1-TAP, state 1)
分子名称: 13 kDa ribonucleoprotein-associated protein, 18S ribosomal RNA, 40S ribosomal protein S1-A, ...
著者Ye, K, Zhu, X, Sun, Q.
登録日2017-01-13
公開日2017-03-29
最終更新日2019-10-09
実験手法ELECTRON MICROSCOPY (8.7 Å)
主引用文献Molecular architecture of the 90S small subunit pre-ribosome.
Elife, 6, 2017
5WWN
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BU of 5wwn by Molmil
Crystal structure of Tsr1
分子名称: Ribosome biogenesis protein TSR1, SULFATE ION
著者Ye, K, Wang, B.
登録日2017-01-03
公開日2017-06-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.805 Å)
主引用文献Molecular architecture of the 90S small subunit pre-ribosome
Elife, 6, 2017
5WXM
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BU of 5wxm by Molmil
Crystal structure of the Imp3 and Mpp10 complex
分子名称: SULFATE ION, U3 small nucleolar RNA-associated protein MPP10, U3 small nucleolar ribonucleoprotein protein IMP3
著者Ye, K, Zheng, S.
登録日2017-01-07
公開日2017-06-28
実験手法X-RAY DIFFRACTION (2.304 Å)
主引用文献Molecular architecture of the 90S small subunit pre-ribosome
Elife, 6, 2017
5WTY
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BU of 5wty by Molmil
Structure of Nop9 RNA complex
分子名称: Nucleolar protein 9, RNA (5'-R(*AP*AP*AP*GP*GP*AP*AP*UP*UP*GP*AP*CP*GP*GP*AP*AP*GP*G)-3')
著者Ye, K, Wang, B.
登録日2016-12-15
公開日2017-01-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.785 Å)
主引用文献Nop9 binds the central pseudoknot region of 18S rRNA
Nucleic Acids Res., 45, 2017
5WXL
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BU of 5wxl by Molmil
Crystal structure of the Rrs1 and Rpf2 complex
分子名称: Regulator of ribosome biosynthesis, Ribosome biogenesis protein RPF2
著者Ye, K, Zheng, S.
登録日2017-01-07
公開日2017-01-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular architecture of the 90S small subunit pre-ribosome
Elife, 6, 2017
5WTX
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BU of 5wtx by Molmil
Structure of Nop9
分子名称: Nucleolar protein 9
著者Ye, K, Wang, B.
登録日2016-12-15
公開日2017-01-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.074 Å)
主引用文献Nop9 binds the central pseudoknot region of 18S rRNA
Nucleic Acids Res., 45, 2017
5WWO
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BU of 5wwo by Molmil
Crystal structure of Enp1
分子名称: Essential nuclear protein 1, Protein LTV1
著者Ye, K, Zhang, W.
登録日2017-01-03
公開日2017-06-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular architecture of the 90S small subunit pre-ribosome
Elife, 6, 2017
5WWM
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BU of 5wwm by Molmil
Crystal structure of the TPR domain of Rrp5
分子名称: SULFATE ION, rRNA biogenesis protein RRP5
著者Ye, K, Chen, X.
登録日2017-01-03
公開日2017-01-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.809 Å)
主引用文献Correction: Molecular architecture of the 90S small subunit pre-ribosome
Elife, 6, 2017
6LLX
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BU of 6llx by Molmil
Discovery of A Dual Inhibitor of NQO1 and GSTP1 for Treating Malignant Glioblastoma
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLUTATHIONE, Glutathione S-transferase P
著者Ye, K, Li, H, Lei, K.C.
登録日2019-12-24
公開日2020-11-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.581 Å)
主引用文献Discovery of a dual inhibitor of NQO1 and GSTP1 for treating glioblastoma.
J Hematol Oncol, 13, 2020
2CWO
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BU of 2cwo by Molmil
Crystal structure of RNA silencing suppressor p21 from Beet Yellows Virus
分子名称: RNA silencing suppressor
著者Ye, K, Patel, D.J.
登録日2005-06-22
公開日2005-10-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献RNA Silencing Suppressor p21 of Beet Yellows Virus Forms an RNA Binding Octameric Ring Structure
STRUCTURE, 13, 2005
6LLC
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BU of 6llc by Molmil
Discovery of A Dual Inhibitor of NQO1 and GSTP1 for Treating Malignant Glioblastoma
分子名称: 5-methyl-N-(5-nitro-1,3-thiazol-2-yl)-3-phenyl-1,2-oxazole-4-carboxamide, FLAVIN-ADENINE DINUCLEOTIDE, NAD(P)H dehydrogenase [quinone] 1, ...
著者Ye, K, Li, H.
登録日2019-12-23
公開日2020-11-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Discovery of a dual inhibitor of NQO1 and GSTP1 for treating glioblastoma.
J Hematol Oncol, 13, 2020
2HVY
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BU of 2hvy by Molmil
Crystal structure of an H/ACA box RNP from Pyrococcus furiosus
分子名称: 50S ribosomal protein L7Ae, ADENOSINE-5'-TRIPHOSPHATE, H/ACA RNA, ...
著者Ye, K.
登録日2006-07-31
公開日2006-09-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of an H/ACA box ribonucleoprotein particle
Nature, 443, 2006
3NO7
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BU of 3no7 by Molmil
Crystal structure of the centromere-binding protein ParB from plasmid pCXC100
分子名称: Putative plasmid related protein, SULFATE ION
著者Ye, K.
登録日2010-06-24
公開日2010-12-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure and centromere binding of the plasmid segregation protein ParB from pCXC100
Nucleic Acids Res., 39, 2011
3UAH
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BU of 3uah by Molmil
Structure of the Shq1 specific domain from Saccharomyces cerevisiae
分子名称: Protein SHQ1
著者Ye, K.
登録日2011-10-21
公開日2011-12-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of the Shq1-Cbf5-Nop10-Gar1 complex and implications for H/ACA RNP biogenesis and dyskeratosis congenita
Embo J., 30, 2011
1L4S
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BU of 1l4s by Molmil
Solution structure of ribosome associated factor Y
分子名称: Protein yfiA
著者Ye, K, Serganov, A, Hu, W, Patel, D.J.
登録日2002-03-05
公開日2002-12-04
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Ribosome-associated factor Y adopts a fold resembling a double-stranded RNA binding domain scaffold.
Eur.J.Biochem., 269, 2002
3UAI
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BU of 3uai by Molmil
Structure of the Shq1-Cbf5-Nop10-Gar1 complex from Saccharomyces cerevisiae
分子名称: H/ACA ribonucleoprotein complex subunit 1, H/ACA ribonucleoprotein complex subunit 3, H/ACA ribonucleoprotein complex subunit 4, ...
著者Ye, K.
登録日2011-10-21
公開日2011-12-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.06 Å)
主引用文献Structure of the Shq1-Cbf5-Nop10-Gar1 complex and implications for H/ACA RNP biogenesis and dyskeratosis congenita
Embo J., 30, 2011
3U28
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BU of 3u28 by Molmil
Crystal structure of a Cbf5-Nop10-Gar1 complex from Saccharomyces cerevisiae
分子名称: H/ACA ribonucleoprotein complex subunit 1, H/ACA ribonucleoprotein complex subunit 3, H/ACA ribonucleoprotein complex subunit 4
著者Ye, K, Li, S.
登録日2011-10-02
公開日2011-12-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Reconstitution and structural analysis of the yeast box H/ACA RNA-guided pseudouridine synthase
Genes Dev., 25, 2011
3RNV
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BU of 3rnv by Molmil
Structure of the autocatalytic cysteine protease domain of potyvirus helper-component proteinase
分子名称: Helper component proteinase
著者Ye, K.
登録日2011-04-22
公開日2011-05-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the autocatalytic cysteine protease domain of potyvirus helper-component proteinase
to be published
3HAX
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BU of 3hax by Molmil
Crystal structure of a substrate-bound Gar1-minus H/ACA RNP from Pyrococcus furiosus
分子名称: 1,2-ETHANEDIOL, 5'-R(*AP*UP*AP*AP*UP*UP*(FHU)P*GP*AP*CP*UP*CP*AP*A)-3', 50S ribosomal protein L7Ae, ...
著者Ye, K.
登録日2009-05-03
公開日2009-06-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Structural mechanism of substrate RNA recruitment in H/ACA RNA-guided pseudouridine synthase.
Mol.Cell, 34, 2009
1SI2
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BU of 1si2 by Molmil
Crystal structure of the PAZ domain of human eIF2c1 in complex with a 9-mer siRNA-like duplex of deoxynucleotide overhang
分子名称: 5'-R(*CP*GP*UP*GP*AP*CP*U)-D(P*CP*T)-3', Eukaryotic translation initiation factor 2C 1
著者Ye, K, Ma, J.B, Patel, D.
登録日2004-02-26
公開日2004-05-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for overhang-specific small interfering RNA recognition by the PAZ domain.
Nature, 429, 2004
1R9F
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BU of 1r9f by Molmil
Crystal structure of p19 complexed with 19-bp small interfering RNA
分子名称: 5'-R(*CP*GP*UP*AP*CP*GP*CP*GP*GP*AP*AP*UP*AP*CP*UP*UP*CP*GP*AP*UP*U)-3', 5'-R(*UP*CP*GP*AP*AP*GP*UP*AP*UP*UP*CP*CP*GP*CP*GP*UP*AP*CP*GP*UP*U)-3', Core protein P19, ...
著者Ye, K, Malinina, L, Patel, D.J.
登録日2003-10-28
公開日2004-01-27
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Recognition of small interfering RNA by a viral suppressor of RNA
Nature, 426, 2003
1SI3
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BU of 1si3 by Molmil
Crystal structure of the PAZ domain of human eIF2c1 in complex with a 9-mer siRNA-like duplex
分子名称: 5'-R(*CP*GP*UP*GP*AP*CP*UP*CP*U)-3', Eukaryotic translation initiation factor 2C 1
著者Ye, K, Ma, J.B, Patel, D.
登録日2004-02-27
公開日2004-05-25
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for overhang-specific small interfering RNA recognition by the PAZ domain.
Nature, 429, 2004
3ID5
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BU of 3id5 by Molmil
Crystal structure of Sulfolobus solfataricus C/D RNP assembled with Nop5, fibrillarin, L7Ae and a split half C/D RNA
分子名称: 50S ribosomal protein L7Ae, Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase, Pre mRNA splicing protein, ...
著者Ye, K.
登録日2009-07-20
公開日2009-08-25
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (4.01 Å)
主引用文献Structural organization of box C/D RNA-guided RNA methyltransferase.
Proc.Natl.Acad.Sci.USA, 106, 2009
2MQJ
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BU of 2mqj by Molmil
Solution structure of ubiquitin-like protein from Caldiarchaeum subterraneum
分子名称: Ubiquitin-like protein
著者Ye, K.
登録日2014-06-22
公開日2015-06-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of ubiquitin-like protein from Caldiarchaeum subterraneum
To be Published
3ICX
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BU of 3icx by Molmil
Crystal structure of Sulfolobus solfataricus Nop5 (135-380)
分子名称: Pre mRNA splicing protein, SULFATE ION
著者Ye, K.
登録日2009-07-19
公開日2009-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural organization of box C/D RNA-guided RNA methyltransferase.
Proc.Natl.Acad.Sci.USA, 106, 2009

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