Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 482 results

1Y7I
DownloadVisualize
BU of 1y7i by Molmil
Structural and biochemical studies identify tobacco SABP2 as a methylsalicylate esterase and further implicate it in plant innate immunity, Northeast Structural Genomics Target AR2241
Descriptor: 2-HYDROXYBENZOIC ACID, salicylic acid-binding protein 2
Authors:Forouhar, F, Yang, Y, Kumar, D, Chen, Y, Fridman, E, Park, S.W, Chiang, Y, Acton, T.B, Montelione, G.T, Pichersky, E, Klessig, D.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2004-12-08
Release date:2004-12-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and biochemical studies identify tobacco SABP2 as a methyl salicylate esterase and implicate it in plant innate immunity
Proc.Natl.Acad.Sci.USA, 102, 2005
4Q46
DownloadVisualize
BU of 4q46 by Molmil
The second structure of Influenza B PB2 cap-binding domain complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Polymerase basic protein 2
Authors:Liu, Y, Yang, Y, Zheng, X.
Deposit date:2014-04-13
Release date:2015-02-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of the PB2 cap-binding domain of influenza B virus reveals a novel cap recognition mechanism.
J.Biol.Chem., 290, 2015
6DZK
DownloadVisualize
BU of 6dzk by Molmil
Cryo-EM Structure of Mycobacterium smegmatis C(minus) 30S ribosomal subunit with MPY
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Sharma, M.R, Li, Y, Korripella, R, Yang, Y, Kaushal, P.S, Lin, Q, Wade, J.T, Gray, A.G, Derbyshire, K.M, Agrawal, R.K, Ojha, A.
Deposit date:2018-07-05
Release date:2018-09-19
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Zinc depletion induces ribosome hibernation in mycobacteria.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1Y7H
DownloadVisualize
BU of 1y7h by Molmil
Structural and biochemical studies identify tobacco SABP2 as a methylsalicylate esterase and further implicate it in plant innate immunity, Northeast Structural Genomics Target AR2241
Descriptor: THIOCYANATE ION, salicylic acid-binding protein 2
Authors:Forouhar, F, Yang, Y, Kumar, D, Chen, Y, Fridman, E, Park, S.W, Chiang, Y, Acton, T.B, Montelione, G.T, Pichersky, E, Klessig, D.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2004-12-08
Release date:2004-12-28
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structural and biochemical studies identify tobacco SABP2 as a methyl salicylate esterase and implicate it in plant innate immunity
Proc.Natl.Acad.Sci.Usa, 102, 2005
3NBI
DownloadVisualize
BU of 3nbi by Molmil
Crystal structure of human RMI1 N-terminus
Descriptor: RecQ-mediated genome instability protein 1
Authors:Wang, F, Yang, Y, Singh, T.R, Busygina, V, Guo, R, Wan, K, Wang, W, Sung, P, Meetei, A.R, Lei, M.
Deposit date:2010-06-03
Release date:2010-09-22
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of RMI1 and RMI2, Two OB-Fold Regulatory Subunits of the BLM Complex.
Structure, 18, 2010
3NBH
DownloadVisualize
BU of 3nbh by Molmil
Crystal structure of human RMI1C-RMI2 complex
Descriptor: RecQ-mediated genome instability protein 1, RecQ-mediated genome instability protein 2
Authors:Wang, F, Yang, Y, Singh, T.R, Busygina, V, Guo, R, Wan, K, Wang, W, Sung, P, Meetei, A.R, Lei, M.
Deposit date:2010-06-03
Release date:2010-09-22
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of RMI1 and RMI2, Two OB-Fold Regulatory Subunits of the BLM Complex.
Structure, 18, 2010
3O45
DownloadVisualize
BU of 3o45 by Molmil
Crystal Structure of 101F Fab Bound to 17-mer Peptide Epitope
Descriptor: Fusion glycoprotein F1, Mouse monoclonal antibody 101F 101F Fab heavy chain, Mouse monoclonal antibody 101F 101F Fab light chain, ...
Authors:McLellan, J.S, Chen, M, Chang, J.S, Yang, Y, Kim, A, Graham, B.S, Kwong, P.D.
Deposit date:2010-07-26
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.872 Å)
Cite:Structure of a Major Antigenic Site on the Respiratory Syncytial Virus Fusion Glycoprotein in Complex with Neutralizing Antibody 101F.
J.Virol., 84, 2010
3OIQ
DownloadVisualize
BU of 3oiq by Molmil
Crystal structure of yeast telomere protein Cdc13 OB1 and the catalytic subunit of DNA polymerase alpha Pol1
Descriptor: Cell division control protein 13, DNA polymerase alpha catalytic subunit A
Authors:Sun, J, Yang, Y, Wan, K, Mao, N, Yu, T.Y, Lin, Y.C, DeZwaan, D.C, Freeman, B.C, Lin, J.J, Lue, N.F, Lei, M.
Deposit date:2010-08-19
Release date:2010-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural bases of dimerization of yeast telomere protein Cdc13 and its interaction with the catalytic subunit of DNA polymerase alpha.
Cell Res., 21, 2011
3OIP
DownloadVisualize
BU of 3oip by Molmil
Crystal structure of Yeast telomere protein Cdc13 OB1
Descriptor: Cell division control protein 13
Authors:Sun, J, Yang, Y, Wan, K, Mao, N, Yu, T.Y, Lin, Y.C, DeZwaan, D.C, Freeman, B.C, Lin, J.J, Lue, N.F, Lei, M.
Deposit date:2010-08-19
Release date:2010-11-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.504 Å)
Cite:Structural bases of dimerization of yeast telomere protein Cdc13 and its interaction with the catalytic subunit of DNA polymerase alpha.
Cell Res., 21, 2011
6E29
DownloadVisualize
BU of 6e29 by Molmil
Crystal structure of Myceliophteria_thermophila Cps50 (Swd1) beta-propeller domain
Descriptor: SWD1-like protein
Authors:Joshi, M, Yang, Y, Brunzelle, J.S, Couture, J.F.
Deposit date:2018-07-10
Release date:2018-07-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.818 Å)
Cite:Structure and Conformational Dynamics of a COMPASS Histone H3K4 Methyltransferase Complex.
Cell, 174, 2018
4H00
DownloadVisualize
BU of 4h00 by Molmil
The crystal structure of mon-Zn dihydropyrimidinase from Tetraodon nigroviridis
Descriptor: ZINC ION, dihydropyrimidinase
Authors:Hsieh, Y.C, Chen, M.C, Hsu, C.C, Chan, S.I, Yang, Y.S, Chen, C.J.
Deposit date:2012-09-06
Release date:2013-09-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Lysine Carboxylation: Metal and Structural Requirements for Post-translational Modification
To be Published
4GZ7
DownloadVisualize
BU of 4gz7 by Molmil
The crystal structure of Apo-dihydropyrimidinase from Tetraodon nigroviridis
Descriptor: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, dihydropyrimidinase
Authors:Hsien, Y.C, Chen, M.C, Hsu, C.C, Chan, S.I, Yang, Y.S, Chen, C.J.
Deposit date:2012-09-06
Release date:2013-09-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Lysine Carboxylation: Metal and Structure Requirements for Post-translational Modification
To be Published
3O41
DownloadVisualize
BU of 3o41 by Molmil
Crystal Structure of 101F Fab Bound to 15-mer Peptide Epitope
Descriptor: Fusion glycoprotein F1, Mouse monoclonal antibody 101F Fab heavy chain, Mouse monoclonal antibody 101F Fab light chain, ...
Authors:McLellan, J.S, Chen, M, Chang, J.S, Yang, Y, Kim, A, Graham, B.S, Kwong, P.D.
Deposit date:2010-07-26
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of a Major Antigenic Site on the Respiratory Syncytial Virus Fusion Glycoprotein in Complex with Neutralizing Antibody 101F.
J.Virol., 84, 2010
4H01
DownloadVisualize
BU of 4h01 by Molmil
The crystal structure of di-Zn dihydropyrimidinase from Tetraodon nigroviridis
Descriptor: ZINC ION, dihydropyrimidinase
Authors:Hsieh, Y.C, Chen, M.C, Hsu, C.C, Chan, S.I, Yang, Y.S, Chen, C.J.
Deposit date:2012-09-06
Release date:2013-09-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Lysine Carboxylation: Metal and Structural Requirements for Post-translational Modification
To be Published
3R0M
DownloadVisualize
BU of 3r0m by Molmil
Crystal structure of anti-HIV llama VHH antibody A12
Descriptor: Llama VHH A12, SULFATE ION
Authors:Chen, L, McLellan, J.S, Kwon, Y.D, Schmidt, S, Wu, X, Zhou, T, Yang, Y, Zhang, B, Forsman, A, Weiss, R.A, Verrips, T, Mascola, J, Kwong, P.D.
Deposit date:2011-03-08
Release date:2012-03-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Single-Headed Immunoglobulins Efficiently Penetrate CD4-Binding Site and Effectively Neutralize HIV-1
To be Published
3RJQ
DownloadVisualize
BU of 3rjq by Molmil
Crystal structure of anti-HIV llama VHH antibody A12 in complex with C186 gp120
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, C186 gp120, Llama VHH A12
Authors:Chen, L, McLellan, J.S, Kwon, Y.D, Schmidt, S, Wu, X, Zhou, T, Yang, Y, Zhang, B, Forsman, A, Weiss, R.A, Verrips, T, Mascola, J, Kwong, P.D.
Deposit date:2011-04-15
Release date:2012-05-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Crystal structure of anti-HIV A12 VHH of llama antibody in complex with C1086 gp120
To be Published
8GYF
DownloadVisualize
BU of 8gyf by Molmil
Crystal structure of a bright green fluorescent protein (StayGold) with single mutation (K192Y) in jellyfish Cytaeis uchidae from Biortus
Descriptor: 1,2-ETHANEDIOL, staygold(K192Y)
Authors:Wu, J, Wang, F, Gui, W, Cheng, W, Yang, Y.
Deposit date:2022-09-22
Release date:2023-10-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a bright green fluorescent protein (StayGold) with single mutation (K192Y) in jellyfish Cytaeis uchidae from Biortus
To Be Published
2JO7
DownloadVisualize
BU of 2jo7 by Molmil
Solution structure of the adhesion protein Bd37 from Babesia divergens
Descriptor: Glycosylphosphatidylinositol-anchored merozoite surface protein
Authors:Auguin, D, Yang, Y, Lohr, F, Arold, S, Schetters, T, Precigout, E, Gorenflot, A, Delbecq, S, Roumestand, C.
Deposit date:2007-02-26
Release date:2007-12-11
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:The Solution Structure of the Adhesion Protein Bd37 from Babesia divergens Reveals Structural Homology with Eukaryotic Proteins Involved in Membrane Trafficking
J.Mol.Biol., 375, 2007
4E7G
DownloadVisualize
BU of 4e7g by Molmil
E. cloacae C115D/R120A MurA in the unliganded state
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Zhu, J.-Y, Yang, Y, Schonbrunn, E.
Deposit date:2012-03-16
Release date:2013-03-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Open-close transition of MurA
To be Published
4MMQ
DownloadVisualize
BU of 4mmq by Molmil
Crystal Structure of Prefusion-stabilized RSV F Variant DS
Descriptor: Fusion glycoprotein F1 fused with Fibritin trimerization domain, Fusion glycoprotein F2, SULFATE ION
Authors:Mclellan, J.S, Joyce, M.G, Stewart-Jones, G.B.E, Sastry, M, Yang, Y, Graham, B.S, Kwong, P.D.
Deposit date:2013-09-09
Release date:2013-11-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.253 Å)
Cite:Structure-based design of a fusion glycoprotein vaccine for respiratory syncytial virus.
Science, 342, 2013
4NRY
DownloadVisualize
BU of 4nry by Molmil
Crystal Structure of HIV-1 Neutralizing Antibody m66
Descriptor: m66 Heavy Chain, m66 Light Chain
Authors:Ofek, G, Yang, Y, Kwong, P.D.
Deposit date:2013-11-27
Release date:2014-02-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:Structural Basis for HIV-1 Neutralization by 2F5-Like Antibodies m66 and m66.6.
J.Virol., 88, 2014
4E7C
DownloadVisualize
BU of 4e7c by Molmil
E. cloacae MurA in complex with UTP
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, UDP-N-acetylglucosamine 1-carboxyvinyltransferase, ...
Authors:Zhu, J.-Y, Yang, Y, Schonbrunn, E.
Deposit date:2012-03-16
Release date:2013-03-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Open-close transition of MurA
To be Published
4OU3
DownloadVisualize
BU of 4ou3 by Molmil
Crystal structure of porcine aminopeptidase N complexed with CNGRCG tumor-homing peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Aminopeptidase N, ...
Authors:Liu, C, Yang, Y, Chen, L, Lin, Y.-L, Li, F.
Deposit date:2014-02-14
Release date:2014-11-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A Unified Mechanism for Aminopeptidase N-based Tumor Cell Motility and Tumor-homing Therapy.
J.Biol.Chem., 289, 2014
4NRX
DownloadVisualize
BU of 4nrx by Molmil
Crystal Structure of HIV-1 Neutralizing Antibody m66 in complex with gp41 MPER peptide
Descriptor: Envelope glycoprotein gp41, m66 Heavy Chain, m66 Light Chain
Authors:Ofek, G, Yang, Y, Kwong, P.D.
Deposit date:2013-11-27
Release date:2014-02-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structural Basis for HIV-1 Neutralization by 2F5-Like Antibodies m66 and m66.6.
J.Virol., 88, 2014
4OR1
DownloadVisualize
BU of 4or1 by Molmil
Structure and mechanism of fibronectin binding and biofilm formation of enteroaggregative Escherischia coli AAF fimbriae
Descriptor: ACETATE ION, Invasin homolog AafB, Major fimbrial subunit of aggregative adherence fimbria II AafA chimeric construct, ...
Authors:Lee, W.-C, Garnett, J.A, Yang, Y, Matthews, S.
Deposit date:2014-02-10
Release date:2014-12-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural insight into host recognition by aggregative adherence fimbriae of enteroaggregative Escherichia coli.
Plos Pathog., 10, 2014

223532

数据于2024-08-07公开中

PDB statisticsPDBj update infoContact PDBjnumon