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PDB: 43 results

4U1Q
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Crystal structure of S-adenosylmethionine-dependent methyltransferase SibL in complex with 3HK and SAH
Descriptor: (2S)-2-amino-4-(2-amino-3-hydroxyphenyl)-4-oxobutanoic acid, S-ADENOSYL-L-HOMOCYSTEINE, SibL
Authors:liu, J.S, Chen, S.C, Yang, C.S, Huang, C.H, Chen, Y.
Deposit date:2014-07-16
Release date:2015-08-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.085 Å)
Cite:Crystal structure of S-adenosylmethionine-dependent methyltransferase SibL in complex with 3HK and SAH
To Be Published
7CAM
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SARS-CoV-2 main protease (Mpro) apo structure (space group P212121)
Descriptor: 3C-like proteinase
Authors:Wang, Y.C, Yang, C.S, Hou, M.H, Tsai, C.L, Chou, Y.Z, Chen, Y.
Deposit date:2020-06-09
Release date:2021-05-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural basis of SARS-CoV-2 main protease inhibition by a broad-spectrum anti-coronaviral drug.
Am J Cancer Res, 10, 2020
7CB7
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BU of 7cb7 by Molmil
1.7A resolution structure of SARS-CoV-2 main protease (Mpro) in complex with broad-spectrum coronavirus protease inhibitor GC376
Descriptor: (1R,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, (1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase, ...
Authors:Wang, Y.C, Yang, C.S, Hou, M.H, Tsai, C.L, Chou, Y.Z, Chen, Y, Hung, M.C.
Deposit date:2020-06-10
Release date:2021-05-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural basis of SARS-CoV-2 main protease inhibition by a broad-spectrum anti-coronaviral drug.
Am J Cancer Res, 10, 2020
5ZLR
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BU of 5zlr by Molmil
Structure of NeuC
Descriptor: GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (Hydrolyzing), LITHIUM ION, SULFATE ION
Authors:Ko, T.P, Hsieh, T.J, Yang, C.S, Chen, Y.
Deposit date:2018-03-29
Release date:2018-05-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:The tetrameric structure of sialic acid-synthesizing UDP-GlcNAc 2-epimerase fromAcinetobacter baumannii: A comparative study with human GNE.
J. Biol. Chem., 293, 2018
7DD0
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BU of 7dd0 by Molmil
Crystal structure of the N-terminal domain of TagH from Bacillus subtilis
Descriptor: Teichoic acids export ATP-binding protein TagH
Authors:Ko, T.P, Yang, C.S, Wang, Y.C, Chen, Y.
Deposit date:2020-10-27
Release date:2020-12-23
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the N-terminal domain of TagH reveals a potential drug targeting site.
Biochem.Biophys.Res.Commun., 536, 2020
7X4P
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BU of 7x4p by Molmil
CD-NTase EfCdnE in complex with intermediate pppUpU
Descriptor: EfCdnE, MAGNESIUM ION, URIDINE 5'-TRIPHOSPHATE, ...
Authors:Chen, Y, Ko, T.P, Yang, C.S, Wang, Y.C, Hou, M.H.
Deposit date:2022-03-03
Release date:2023-03-08
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure and functional implications of cyclic di-pyrimidine-synthesizing cGAS/DncV-like nucleotidyltransferases.
Nat Commun, 14, 2023
7X4A
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Native CD-NTase ClCdnE
Descriptor: ClCdnE
Authors:Chen, Y, Ko, T.P, Yang, C.S, Wang, Y.C, Hou, M.H.
Deposit date:2022-03-02
Release date:2023-03-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structure and functional implications of cyclic di-pyrimidine-synthesizing cGAS/DncV-like nucleotidyltransferases.
Nat Commun, 14, 2023
7X4C
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Native CD-NTase EfCdnE
Descriptor: EfCdnE, L(+)-TARTARIC ACID
Authors:Chen, Y, Ko, T.P, Yang, C.S, Wang, Y.C, Hou, M.H.
Deposit date:2022-03-02
Release date:2023-03-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure and functional implications of cyclic di-pyrimidine-synthesizing cGAS/DncV-like nucleotidyltransferases.
Nat Commun, 14, 2023
7X4G
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BU of 7x4g by Molmil
CD-NTase ClCdnE in complex with substrate UTP
Descriptor: ClCdnE, MAGNESIUM ION, URIDINE 5'-TRIPHOSPHATE
Authors:Chen, Y, Ko, T.P, Yang, C.S, Wang, Y.C, Hou, M.H.
Deposit date:2022-03-02
Release date:2023-03-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure and functional implications of cyclic di-pyrimidine-synthesizing cGAS/DncV-like nucleotidyltransferases.
Nat Commun, 14, 2023
7X4T
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BU of 7x4t by Molmil
LpCdnE UMPNPP Mg complex
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, Cyclic dipyrimidine nucleotide synthase, GLYCEROL, ...
Authors:Chen, Y, Ko, T.P, Yang, C.S, Wang, Y.C, Hou, M.H.
Deposit date:2022-03-03
Release date:2023-03-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure and functional implications of cyclic di-pyrimidine-synthesizing cGAS/DncV-like nucleotidyltransferases.
Nat Commun, 14, 2023
7X4F
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BU of 7x4f by Molmil
Native CD-NTase LpCdnE
Descriptor: Cyclic dipyrimidine nucleotide synthase, SULFATE ION
Authors:Chen, Y, Ko, T.P, Yang, C.S, Wang, Y.C, Hou, M.H.
Deposit date:2022-03-02
Release date:2023-03-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Crystal structure and functional implications of cyclic di-pyrimidine-synthesizing cGAS/DncV-like nucleotidyltransferases.
Nat Commun, 14, 2023
7X4Q
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BU of 7x4q by Molmil
LpCdnE UTP Mg complex
Descriptor: Cyclic dipyrimidine nucleotide synthase, MAGNESIUM ION, URIDINE 5'-TRIPHOSPHATE
Authors:Chen, Y, Ko, T.P, Yang, C.S, Wang, Y.C, Hou, M.H.
Deposit date:2022-03-03
Release date:2023-03-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure and functional implications of cyclic di-pyrimidine-synthesizing cGAS/DncV-like nucleotidyltransferases.
Nat Commun, 14, 2023
7WQA
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BU of 7wqa by Molmil
SARS-CoV-2 main protease in complex with Z-VAD-FMK
Descriptor: 3C-like proteinase, Z-VAD(OMe)-FMK
Authors:Wang, Y.C, Yang, C.S, Hou, M.H, Tsai, C.L, Chen, Y.
Deposit date:2022-01-25
Release date:2023-03-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:SARS-CoV-2 main protease in complex with Z-VAD-FMK
To Be Published
7WQ9
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BU of 7wq9 by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with Z-IETD-FMK
Descriptor: 3C-like proteinase, Z-IETD-FMK
Authors:Wang, Y.C, Yang, C.S, Hou, M.H, Tsai, C.L, Chen, Y.
Deposit date:2022-01-25
Release date:2023-08-02
Method:X-RAY DIFFRACTION (2.054 Å)
Cite:Crystal structure of SARS-CoV-2 main protease in complex with Z-IETD-FMK
To Be Published
7WQ8
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BU of 7wq8 by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with Z-DEVD-FMK
Descriptor: 3C-like proteinase, Z-DEVD-FMK
Authors:Wang, Y.C, Yang, C.S, Hou, M.H, Tsai, C.L, Chen, Y.
Deposit date:2022-01-24
Release date:2023-08-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of SARS-CoV-2 main protease in complex with Z-DEVD-FMK
To Be Published
7WQB
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BU of 7wqb by Molmil
SARS-CoV-2 main protease mutant (P168A) in complex with MG-132
Descriptor: 3C-like proteinase nsp5, MAGNESIUM ION, N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]-L-leucinamide
Authors:Wang, Y.C, Yang, C.S, Hou, M.H, Tsai, C.L, Chen, Y.
Deposit date:2022-01-25
Release date:2023-08-02
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:SARS-CoV-2 main protease mutant (P168A) in complex with MG-132
To Be Published
7WQK
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wild-type SARS-CoV-2 main protease in complex with MG-132
Descriptor: 3C-like proteinase, MAGNESIUM ION, N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]-L-leucinamide
Authors:Wang, Y.C, Yang, C.S, Hou, M.H, Tsai, C.L, Chen, Y.
Deposit date:2022-01-25
Release date:2023-08-02
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:wild-type SARS-CoV-2 main protease in complex with MG-132
To Be Published
7XJW
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Crystal structure of canine coronavirus main protease in complex with GC376
Descriptor: (1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, ORF1a polyprotein
Authors:Wang, Y.C, Yang, C.S, Hou, M.H, Tsai, C.L, Chiu, Y.F, Chen, Y.
Deposit date:2022-04-18
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A Structural Comparison of SARS-CoV-2 Main Protease and Animal Coronaviral Main Protease Reveals Species-Specific Ligand Binding and Dimerization Mechanism.
Int J Mol Sci, 23, 2022
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PDB entries from 2024-10-16

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