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PDB: 688 件

2D3S
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Crystal Structure of basic winged bean lectin with Tn-antigen
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Basic agglutinin, ...
著者Kulkarni, K.A, Sinha, S, Katiyar, S, Surolia, A, Vijayan, M, Suguna, K.
登録日2005-10-01
公開日2006-01-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis for the specificity of basic winged bean lectin for the Tn-antigen: a crystallographic, thermodynamic and modelling study
Febs Lett., 579, 2005
9EPQ
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Cryo-EM Structure of Jumping Spider Rhodopsin-1 bound to a Giq heterotrimer
分子名称: 11,20-Ethanoretinal, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Tejero, O, Pamula, F, Koyanagi, M, Nagata, T, Afanasyev, P, Das, I, Deupi, X, Sheves, M, Terakita, A, Schertler, G.F.X, Rodrigues, M.J, Tsai, C.-J.
登録日2024-03-19
公開日2024-10-23
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (4.15 Å)
主引用文献Active state structures of a bistable visual opsin bound to G proteins.
Nat Commun, 15, 2024
2DTW
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Crystal Structure of basic winged bean lectin in complex with 2Me-O-D-Galactose
分子名称: 2-O-methyl-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kulkarni, K.A, Katiyar, S, Surolia, A, Vijayan, M, Suguna, K.
登録日2006-07-18
公開日2006-11-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for the carbohydrate-specificity of basic winged-bean lectin and its differential affinity for Gal and GalNAc
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
1F9K
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WINGED BEAN ACIDIC LECTIN COMPLEXED WITH METHYL-ALPHA-D-GALACTOSE
分子名称: ACIDIC LECTIN, CALCIUM ION, MANGANESE (II) ION, ...
著者Manoj, N, Srinivas, V.R, Surolia, A, Vijayan, M, Suguna, K.
登録日2000-07-11
公開日2001-07-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Carbohydrate specificity and salt-bridge mediated conformational change in acidic winged bean agglutinin.
J.Mol.Biol., 302, 2000
1FAY
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WINGED BEAN ACIDIC LECTIN COMPLEXED WITH METHYL-ALPHA-D-GALACTOSE (MONOCLINIC FORM)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACIDIC LECTIN, CALCIUM ION, ...
著者Manoj, N, Srinivas, V.R, Surolia, A, Vijayan, M, Suguna, K.
登録日2000-07-14
公開日2001-07-14
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Carbohydrate specificity and salt-bridge mediated conformational change in acidic winged bean agglutinin.
J.Mol.Biol., 302, 2000
4JND
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Structure of a C.elegans sex determining protein
分子名称: Ca(2+)/calmodulin-dependent protein kinase phosphatase, MAGNESIUM ION
著者Feng, Y, Zhang, Y, Ge, J, Yang, M.
登録日2013-03-15
公開日2013-06-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.652 Å)
主引用文献Structural insight into Caenorhabditis elegans sex-determining protein FEM-2.
J.Biol.Chem., 288, 2013
4JDZ
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Structures of SdrD from Staphylococcus aureus reveal the molecular mechanism of how the cell surface receptors recognize their ligands
分子名称: CALCIUM ION, Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrD
著者Wang, X, Ge, J, Yang, M.
登録日2013-02-25
公開日2013-06-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structures of SdrD from Staphylococcus aureus reveal the molecular mechanism of how the cell surface receptors recognize their ligands
Protein Cell, 4, 2013
4JE0
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Structures of SdrD from Staphylococcus aureus reveal the molecular mechanism of how the cell surface receptors recognize their ligands
分子名称: CALCIUM ION, Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrD
著者Wang, X, Ge, J, Yang, M.
登録日2013-02-25
公開日2013-06-19
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structures of SdrD from Staphylococcus aureus reveal the molecular mechanism of how the cell surface receptors recognize their ligands
Protein Cell, 4, 2013
4L90
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Crystal structure of Human Hsp90 with RL3
分子名称: Heat shock protein HSP 90-alpha, [5-(6-bromo[1,2,4]triazolo[4,3-a]pyridin-3-yl)-2,4-dihydroxyphenyl](4-methylpiperazin-1-yl)methanone
著者Li, J, Ren, J, Yang, M, Xiong, B, He, J.
登録日2013-06-18
公開日2014-06-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Crystal structure of Human Hsp90 with RL3
to be published
4L36
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Crystal structure of the cytochrome P450 enzyme TxtE
分子名称: HEME B/C, IMIDAZOLE, Putative P450-like protein
著者Yu, F, Li, M.J, Xu, C.Y, Wang, Z.J, Zhou, H, Yang, M, Chen, Y.X, Tang, L, He, J.H.
登録日2013-06-05
公開日2013-12-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.104 Å)
主引用文献Structural Insights into the Mechanism for Recognizing Substrate of the Cytochrome P450 Enzyme TxtE.
Plos One, 8, 2013
3UDC
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Crystal structure of a membrane protein
分子名称: Small-conductance mechanosensitive channel, C-terminal peptide from Small-conductance mechanosensitive channel
著者Li, W, Ge, J, Yang, M.
登録日2011-10-28
公開日2012-10-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.355 Å)
主引用文献Structure and molecular mechanism of an anion-selective mechanosensitive channel of small conductance
Proc.Natl.Acad.Sci.USA, 109, 2012
4L0K
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Crystal structure of a type II restriction endonuclease
分子名称: DraIII
著者Zhuo, W, Ge, J, Yang, M.
登録日2013-05-31
公開日2014-05-14
実験手法X-RAY DIFFRACTION (2.328 Å)
主引用文献Elimination of inter-domain interactions increases the cleavage fidelity of the restriction endonuclease DraIII.
Protein Cell, 5, 2014
4L93
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Crystal structure of Human Hsp90 with S36
分子名称: 3,4-dihydroisoquinolin-2(1H)-yl[2,4-dihydroxy-5-(propan-2-yl)phenyl]methanone, Heat shock protein HSP 90-alpha
著者Li, J, Ren, J, Yang, M, Xiong, B, He, J.
登録日2013-06-18
公開日2014-06-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.845 Å)
主引用文献Crystal structure of Human Hsp90 with S36
To be Published
1UJ1
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Crystal structure of SARS Coronavirus Main Proteinase (3CLpro)
分子名称: 3C-like proteinase
著者Yang, H, Yang, M, Liu, Y, Bartlam, M, Ding, Y, Lou, Z, Sun, L, Zhou, Z, Ye, S, Anand, K, Pang, H, Gao, G.F, Hilgenfeld, R, Rao, Z.
登録日2003-07-25
公開日2003-11-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structures of severe acute respiratory syndrome virus main protease and its complex with an inhibitor
Proc.Natl.Acad.Sci.USA, 100, 2003
1UK2
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Crystal structure of SARS Coronavirus Main Proteinase (3CLpro) At pH8.0
分子名称: 3C-LIKE PROTEINASE
著者Yang, H, Yang, M, Liu, Y, Bartlam, M, Ding, Y, Lou, Z, Sun, L, Zhou, Z, Ye, S, Anand, K, Pang, H, Gao, G.F, Hilgenfeld, R, Rao, Z.
登録日2003-08-14
公開日2003-11-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The crystal structures of severe acute respiratory syndrome virus main protease and its complex with an inhibitor
Proc.Natl.Acad.Sci.USA, 100, 2003
1UK3
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Crystal structure of SARS Coronavirus Main Proteinase (3CLpro) At pH7.6
分子名称: 3C-like proteinase
著者Yang, H, Yang, M, Liu, Y, Bartlam, M, Ding, Y, Lou, Z, Sun, L, Zhou, Z, Ye, S, Anand, K, Pang, H, Gao, G.F, Hilgenfeld, R, Rao, Z.
登録日2003-08-14
公開日2003-11-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structures of severe acute respiratory syndrome virus main protease and its complex with an inhibitor
Proc.Natl.Acad.Sci.USA, 100, 2003
1UK4
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Crystal structure of SARS Coronavirus Main Proteinase (3CLpro) Complexed With An Inhibitor
分子名称: 3C-like proteinase nsp5, 5-mer peptide of inhibitor
著者Yang, H, Yang, M, Liu, Y, Bartlam, M, Ding, Y, Lou, Z, Sun, L, Zhou, Z, Ye, S, Anand, K, Pang, H, Gao, G.F, Hilgenfeld, R, Rao, Z.
登録日2003-08-14
公開日2003-11-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structures of severe acute respiratory syndrome virus main protease and its complex with an inhibitor
Proc.Natl.Acad.Sci.USA, 100, 2003
2DCH
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Crystal structure of archaeal intron-encoded homing endonuclease I-Tsp061I
分子名称: CHLORIDE ION, SULFATE ION, putative homing endonuclease
著者Nakayama, H, Tsuge, H, Shimamura, T, Miyano, M, Nomura, N, Sako, Y.
登録日2006-01-06
公開日2006-07-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Structure of a hyperthermophilic archaeal homing endonuclease, I-Tsp061I: contribution of cross-domain polar networks to thermostability.
J.Mol.Biol., 365, 2007
2Q2P
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Beta-lactoglobulin (reverse native)
分子名称: Beta-lactoglobulin
著者Vijayalakshmi, L, Krishna, R, Sankaranarayanan, R, Vijayan, M.
登録日2007-05-29
公開日2008-02-26
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献An asymmetric dimer of beta-lactoglobulin in a low humidity crystal form-Structural changes that accompany partial dehydration and protein action.
Proteins, 71, 2007
2DM6
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Crystal structure of anti-configuration of indomethacin and leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase complex
分子名称: INDOMETHACIN, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADP-dependent leukotriene B4 12-hydroxydehydrogenase, ...
著者Hori, T, Ishijima, J, Yokomizo, T, Ago, H, Shimizu, T, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-20
公開日2006-11-28
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of anti-configuration of indomethacin and leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase complex reveals the structural basis of broad spectrum indomethacin efficacy
J.Biochem.(Tokyo), 140, 2006
2Z2J
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Crystal structure of Peptidyl-tRNA hydrolase from Mycobacterium tuberculosis
分子名称: Peptidyl-tRNA hydrolase
著者Selvaraj, M, Roy, S, Singh, N.S, Sangeetha, R, Varshney, U, Vijayan, M.
登録日2007-05-22
公開日2007-07-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural Plasticity and Enzyme Action: Crystal Structures of Mycobacterium tuberculosis Peptidyl-tRNA Hydrolase
J.Mol.Biol., 372, 2007
2Q2M
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Beta-lactoglobulin (native)
分子名称: Beta-lactoglobulin
著者Vijayalakshmi, L, Krishna, R, Sankaranarayanan, R, Vijayan, M.
登録日2007-05-29
公開日2008-02-26
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献An asymmetric dimer of beta-lactoglobulin in a low humidity crystal form-Structural changes that accompany partial dehydration and protein action.
Proteins, 71, 2007
7SXE
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Crystal structure of ligase I with nick duplexes containing cognate G:T
分子名称: ADENOSINE MONOPHOSPHATE, DNA chain 1, DNA chain 2, ...
著者Tang, Q, Gulkis, M, McKenna, R, Caglayan, M.
登録日2021-11-22
公開日2022-07-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structures of LIG1 that engage with mutagenic mismatches inserted by pol beta in base excision repair.
Nat Commun, 13, 2022
7SX5
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Crystal structure of ligase I with nick duplexes containing mismatch A:C
分子名称: ADENOSINE MONOPHOSPHATE, DNA chain 1, DNA chain 2, ...
著者Tang, Q, Gulkis, M, McKenna, R, Caglayan, M.
登録日2021-11-22
公開日2022-07-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structures of LIG1 that engage with mutagenic mismatches inserted by pol beta in base excision repair.
Nat Commun, 13, 2022
7SUM
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Crystal structure of human ligase I with nick duplexes containing cognate A:T
分子名称: ADENOSINE MONOPHOSPHATE, DNA ligase 1, DNA(5'-*GP*CP*TP*GP*AP*TP*GP*CP*GP*TP*A-3'), ...
著者Tang, Q, Gulkis, M, McKenna, R, Caglayan, M.
登録日2021-11-17
公開日2022-07-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of LIG1 that engage with mutagenic mismatches inserted by pol beta in base excision repair.
Nat Commun, 13, 2022

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件を2024-11-06に公開中

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