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PDB: 904 results

1LFL
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DEOXY HEMOGLOBIN (90% RELATIVE HUMIDITY)
Descriptor: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
Authors:Biswal, B.K, Vijayan, M.
Deposit date:2002-04-11
Release date:2002-10-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of human oxy- and deoxyhaemoglobin at different levels of humidity: variability in the T state.
Acta Crystallogr.,Sect.D, 58, 2002
1LQG
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ESCHERICHIA COLI URACIL-DNA GLYCOSYLASE COMPLEX WITH URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN
Descriptor: URACIL-DNA GLYCOSYLASE, URACIL-DNA GLYCOSYLASE INHIBITOR
Authors:Saikrishnan, K, Sagar, M.B, Ravishankar, R, Roy, S, Purnapatre, K, Handa, P, Varshney, U, Vijayan, M.
Deposit date:2002-05-10
Release date:2002-11-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Domain closure and action of uracil DNA glycosylase (UDG): structures of new crystal forms containing the Escherichia coli enzyme and a comparative study of the known structures involving UDG.
Acta Crystallogr.,Sect.D, 58, 2002
3E6Y
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BU of 3e6y by Molmil
Structure of 14-3-3 in complex with the differentiation-inducing agent Cotylenin A
Descriptor: 14-3-3-like protein C, CHLORIDE ION, Cotylenin A, ...
Authors:Ottmann, C, Weyand, M, Wittinghofer, A, Oecking, C.
Deposit date:2008-08-17
Release date:2009-03-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A structural rationale for selective stabilization of anti-tumor interactions of 14-3-3 proteins by cotylenin A
J.Mol.Biol., 386, 2009
1JY7
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THE STRUCTURE OF HUMAN METHEMOGLOBIN. THE VARIATION OF A THEME
Descriptor: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
Authors:Biswal, B.K, Vijayan, M.
Deposit date:2001-09-11
Release date:2002-03-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structures of human oxy- and deoxyhaemoglobin at different levels of humidity: variability in the T state.
Acta Crystallogr.,Sect.D, 58, 2002
1LMA
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PROTEIN HYDRATION AND WATER STRUCTURE: X-RAY ANALYSIS OF A CLOSELY PACKED PROTEIN CRYSTAL WITH VERY LOW SOLVENT CONTENT
Descriptor: HEN EGG WHITE LYSOZYME, NITRATE ION
Authors:Madhusudan, Kodandapani, R, Vijayan, M.
Deposit date:1992-08-14
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Protein hydration and water structure: X-ray analysis of a closely packed protein crystal with very low solvent content.
Acta Crystallogr.,Sect.D, 49, 1993
1LQJ
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ESCHERICHIA COLI URACIL-DNA GLYCOSYLASE
Descriptor: URACIL-DNA GLYCOSYLASE
Authors:Saikrishnan, K, Sagar, M.B, Ravishankar, R, Roy, S, Purnapatre, K, Varshney, U, Vijayan, M.
Deposit date:2002-05-10
Release date:2002-11-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Domain closure and action of uracil DNA glycosylase (UDG): structures of new crystal forms containing the Escherichia coli enzyme and a comparative study of the known structures involving UDG.
Acta Crystallogr.,Sect.D, 58, 2002
4LRV
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BU of 4lrv by Molmil
Crystal structure of DndE from Escherichia coli B7A involved in DNA phosphorothioation modification
Descriptor: DNA sulfur modification protein DndE
Authors:Hu, W, Wang, C.K, Liang, J.D, Zhang, T.L, Yang, M, Hu, Z.P, Wang, Z.J, Lan, W.X, Wu, H.M, Ding, J.P, Wu, G, Deng, Z.X, Cao, C.
Deposit date:2013-07-21
Release date:2013-08-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into DndE from Escherichia coli B7A involved in DNA phosphorothioation modification
Cell Res., 22, 2012
1HSW
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BU of 1hsw by Molmil
LYSOZYME (MUCOPEPTIDE N-ACETYLMURAMYL HYDROLASE)
Descriptor: LYSOZYME
Authors:Sukumar, N, Biswal, B.K, Vijayan, M.
Deposit date:1998-06-04
Release date:1998-08-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of orthorhombic lysozyme grown at basic pH and its low-humidity variant.
Acta Crystallogr.,Sect.D, 55, 1999
1J3B
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BU of 1j3b by Molmil
Crystal structure of ATP-dependent phosphoenolpyruvate carboxykinase from Thermus thermophilus HB8
Descriptor: ATP-dependent phosphoenolpyruvate carboxykinase, CALCIUM ION, GLYCEROL, ...
Authors:Sugahara, M, Miyano, M, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-01-21
Release date:2003-02-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of ATP-dependent phosphoenolpyruvate carboxykinase from Thermus thermophilus HB8 showing the structural basis of induced fit and thermostability.
Acta Crystallogr.,Sect.D, 61, 2005
1J3W
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Structure of Gliding protein-mglB from Thermus Thermophilus HB8
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Giding protein-mglB, MAGNESIUM ION, ...
Authors:Lokanath, N.K, Kunishima, N, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-02-18
Release date:2004-04-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of Gliding protein-mglB from Thermus THermophilus HB8
To be Published
1J4T
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Structure of Artocarpin: a Lectin with Mannose Specificity (Form 2)
Descriptor: Artocarpin
Authors:Pratap, J.V, Jeyaprakash, A.A, Rani, P.G, Sekar, K, Surolia, A, Vijayan, M.
Deposit date:2001-10-30
Release date:2002-03-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of artocarpin, a Moraceae lectin with mannose specificity, and its complex with methyl-alpha-D-mannose: implications to the generation of carbohydrate specificity.
J.Mol.Biol., 317, 2002
7V33
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Active state complex I from rotenone-NADH dataset
Descriptor: (2R,6aS,12aS)-8,9-dimethoxy-2-(prop-1-en-2-yl)-1,2,12,12a-tetrahydrofuro[2',3':7,8][1]benzopyrano[2,3-c][1]benzopyran-6(6aH)-one, (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, ...
Authors:Gu, J.K, Yang, M.J.
Deposit date:2021-08-10
Release date:2022-03-02
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:The coupling mechanism of mammalian mitochondrial complex I.
Nat.Struct.Mol.Biol., 29, 2022
7V2D
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Deactive state complex I from Q10 dataset
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Gu, J.K, Yang, M.J.
Deposit date:2021-08-08
Release date:2022-03-02
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The coupling mechanism of mammalian mitochondrial complex I.
Nat.Struct.Mol.Biol., 29, 2022
7V2R
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Active state complex I from Q1-NADH dataset
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ...
Authors:Gu, J.K, Yang, M.J.
Deposit date:2021-08-09
Release date:2022-03-02
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:The coupling mechanism of mammalian mitochondrial complex I.
Nat.Struct.Mol.Biol., 29, 2022
7V2K
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Deactive state complex I from DQ-NADH dataset
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ...
Authors:Gu, J.K, Yang, M.J.
Deposit date:2021-08-09
Release date:2022-03-02
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:The coupling mechanism of mammalian mitochondrial complex I.
Nat.Struct.Mol.Biol., 29, 2022
7V2F
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BU of 7v2f by Molmil
Deactive state complex I from Q10-NADH dataset
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ...
Authors:Gu, J.K, Yang, M.J.
Deposit date:2021-08-09
Release date:2022-03-02
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The coupling mechanism of mammalian mitochondrial complex I.
Nat.Struct.Mol.Biol., 29, 2022
1ODI
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BU of 1odi by Molmil
Purine nucleoside phosphorylase from Thermus Thermophilus
Descriptor: ADENOSINE, PURINE NUCLEOSIDE PHOSPHORYLASE, SULFATE ION
Authors:Tahirov, T.H, Inagaki, E, Miyano, M.
Deposit date:2003-02-19
Release date:2003-02-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Purine Nucleoside Phosphorylase from Thermus Thermophilus
J.Mol.Biol., 337, 2004
1J2W
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Tetrameric Structure of aldolase from Thermus thermophilus HB8
Descriptor: Aldolase protein
Authors:Lokanath, N.K, Shiromizu, I, Miyano, M, Yokoyama, S, Kuramitsu, S, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-01-14
Release date:2003-04-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of aldolase from Thermus thermophilus HB8 showing the contribution of oligomeric state to thermostability.
Acta Crystallogr.,Sect.D, 60, 2004
1UBG
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MsREcA-dATP complex
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, RecA
Authors:Datta, S, Krishna, R, Ganesh, N, Chandra, N.R, Muniyappa, K, Vijayan, M.
Deposit date:2003-04-04
Release date:2003-07-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal Structures of Mycobacterium smegmatis RecA and Its Nucleotide Complexes
J.BACTERIOL., 185, 2003
4L8Z
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Crystal structure of Human Hsp90 with RL1
Descriptor: Heat shock protein HSP 90-alpha, [5-(6-bromo[1,2,4]triazolo[4,3-a]pyridin-3-yl)-2,4-dihydroxyphenyl](3,4-dihydroisoquinolin-2(1H)-yl)methanone
Authors:Li, J, Ren, J, Yang, M, Xiong, B, He, J.
Deposit date:2013-06-18
Release date:2014-06-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:Identification of a new series of potent diphenol HSP90 inhibitors by fragment merging and structure-based optimization
Bioorg.Med.Chem.Lett., 24, 2014
1JJ1
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CRYSTAL STRUCTURE OF ORTHORHOMBIC LYSOZYME GROWN AT PH 4.6 IN PRESENCE OF 5% SORBITOL
Descriptor: LYSOZYME
Authors:Datta, S, Biswal, B.K, Vijayan, M.
Deposit date:2001-07-03
Release date:2001-11-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The effect of stabilizing additives on the structure and hydration of proteins: a study involving tetragonal lysozyme.
Acta Crystallogr.,Sect.D, 57, 2001
1JJ0
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BU of 1jj0 by Molmil
CRYSTAL STRUCTURE OF TETRAGONAL LYSOZYME GROWN IN PRESENCE of 30% SUCROSE
Descriptor: LYSOZYME, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Datta, S, Biswal, B.K, Vijayan, M.
Deposit date:2001-07-03
Release date:2001-11-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The effect of stabilizing additives on the structure and hydration of proteins: a study involving tetragonal lysozyme.
Acta Crystallogr.,Sect.D, 57, 2001
1UBE
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BU of 1ube by Molmil
MsRecA-ADP Complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, RecA
Authors:Datta, S, Krishna, R, Ganesh, N, Chandra, N.R, Muniyappa, K, Vijayan, M.
Deposit date:2003-04-04
Release date:2003-07-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structures of Mycobacterium smegmatis RecA and Its Nucleotide Complexes
J.BACTERIOL., 185, 2003
1HIS
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BU of 1his by Molmil
Structure and dynamics of des-pentapeptide-insulin in solution: the molten-globule hypothesis.
Descriptor: INSULIN
Authors:Hua, Q.X, Kochoyan, M, Weiss, M.A.
Deposit date:1992-02-28
Release date:1994-01-31
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structure and dynamics of des-pentapeptide-insulin in solution: the molten-globule hypothesis.
Proc.Natl.Acad.Sci.USA, 89, 1992
1RHA
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BU of 1rha by Molmil
WATER DEPENDENT DOMAIN MOTION AND FLEXIBILITY IN RIBONUCLEASE A AND THE INVARIANT FEATURES IN ITS HYDRATION SHELL. AN X-RAY STUDY OF TWO LOW HUMIDITY CRYSTAL FORMS OF THE ENZYME
Descriptor: RIBONUCLEASE A
Authors:Radha Kishan, K.V, Chandra, N.R, Sudarsanakumar, C, Suguna, K, Vijayan, M.
Deposit date:1994-11-13
Release date:1995-02-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Water-dependent domain motion and flexibility in ribonuclease A and the invariant features in its hydration shell. An X-ray study of two low-humidity crystal forms of the enzyme.
Acta Crystallogr.,Sect.D, 51, 1995

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