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PDB: 904 件

1WS5
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Crystal structure of Jacalin-Me-alpha-Mannose complex: Promiscuity vs Specificity
分子名称: Agglutinin alpha chain, Agglutinin beta-3 chain, methyl alpha-D-mannopyranoside
著者Jeyaprakash, A.A, Jayashree, G, Mahanta, S.K, Sekar, K, Surolia, A, Vijayan, M.
登録日2004-10-31
公開日2005-03-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for the energetics of jacalin-sugar interactions: promiscuity versus specificity
J.Mol.Biol., 347, 2005
5Y97
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Crystal structure of snake gourd seed lectin in complex with lactose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Seed lectin, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Chandran, T, Vijayan, M, Sivaji, N, Surolia, A.
登録日2017-08-23
公開日2018-08-29
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Ligand binding and retention in snake gourd seed lectin (SGSL). A crystallographic, thermodynamic and molecular dynamics study
Glycobiology, 28, 2018
4OKC
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Structure, interactions and evolutionary implications of a domain-swapped lectin dimer from Mycobacterium smegmatis
分子名称: LysM domain protein
著者Patra, D, Mishra, P, Surolia, A, Vijayan, M.
登録日2014-01-22
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure, interactions and evolutionary implications of a domain-swapped lectin dimer from Mycobacterium smegmatis.
Glycobiology, 24, 2014
2LVM
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Solution structure of human 53BP1 tandem Tudor domains in complex with a histone H4K20me2 peptide
分子名称: Histone H4, Tumor suppressor p53-binding protein 1
著者Cui, G, Botuyan, M, Mer, G.
登録日2012-07-07
公開日2012-12-12
最終更新日2013-04-03
実験手法SOLUTION NMR
主引用文献Acetylation limits 53BP1 association with damaged chromatin to promote homologous recombination.
Nat.Struct.Mol.Biol., 20, 2013
2DDS
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BU of 2dds by Molmil
Crystal structure of sphingomyelinase from Bacillus cereus with cobalt ion
分子名称: COBALT (II) ION, Sphingomyelin phosphodiesterase
著者Ago, H, Oda, M, Takahashi, M, Tsuge, H, Ochi, S, Katunuma, N, Miyano, M, Sakurai, J, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-02-02
公開日2006-05-02
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis of the Sphingomyelin Phosphodiesterase Activity in Neutral Sphingomyelinase from Bacillus cereus.
J.Biol.Chem., 281, 2006
1X3F
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Crystal structure of the single-stranded DNA-binding protein from Mycobacterium SMEGMATIS
分子名称: CADMIUM ION, Single-strand binding protein
著者Saikrishnan, K, Manjunath, G.P, Singh, P, Jeyakanthan, J, Dauter, Z, Sekar, K, Muniyappa, K, Vijayan, M.
登録日2005-05-05
公開日2005-08-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of Mycobacterium smegmatis single-stranded DNA-binding protein and a comparative study involving homologus SSBs: biological implications of structural plasticity and variability in quaternary association.
Acta Crystallogr.,Sect.D, 61, 2005
2DVB
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BU of 2dvb by Molmil
Crystal structure of peanut lectin GAl-beta-1,6-GalNAc complex
分子名称: CALCIUM ION, Galactose-binding lectin, MANGANESE (II) ION, ...
著者Natchiar, S.K, Srinivas, O, Mitra, N, Surolia, A, Jayaraman, N, Vijayan, M.
登録日2006-07-30
公開日2006-11-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural studies on peanut lectin complexed with disaccharides involving different linkages: further insights into the structure and interactions of the lectin
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2DVF
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Crystals of peanut lectin grown in the presence of GAL-ALPHA-1,3-GAL-BETA-1,4-GAL
分子名称: CALCIUM ION, Galactose-binding lectin, MANGANESE (II) ION, ...
著者Natchiar, S.K, Srinivas, O, Mitra, N, Surolia, A, Jayaraman, N, Vijayan, M.
登録日2006-07-31
公開日2006-11-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Structural studies on peanut lectin complexed with disaccharides involving different linkages: further insights into the structure and interactions of the lectin
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
1WBJ
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wildtype tryptophan synthase complexed with glycerol phosphate
分子名称: PYRIDOXAL-5'-PHOSPHATE, SN-GLYCEROL-3-PHOSPHATE, SODIUM ION, ...
著者Kulik, V, Weyand, M, Schlichting, I.
登録日2004-11-01
公開日2006-05-24
最終更新日2019-05-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献On the Structural Basis of the Catalytic Mechanism and the Regulation of the Alpha Subunit of Tryptophan Synthase from Salmonella Typhimurium and Bx1 from Maize, Two Evolutionarily Related Enzymes.
J.Mol.Biol., 352, 2005
2DVD
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Crystal structure of peanut lectin GAL-ALPHA-1,3-GAL complex
分子名称: CALCIUM ION, Galactose-binding lectin, MANGANESE (II) ION, ...
著者Natchiar, S.K, Srinivas, O, Mitra, N, Surolia, A, Jayaraman, N, Vijayan, M.
登録日2006-07-31
公開日2006-11-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural studies on peanut lectin complexed with disaccharides involving different linkages: further insights into the structure and interactions of the lectin
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2DDR
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BU of 2ddr by Molmil
Crystal structure of sphingomyelinase from Bacillus cereus with calcium ion
分子名称: CALCIUM ION, Sphingomyelin phosphodiesterase
著者Ago, H, Oda, M, Takahashi, M, Tsuge, H, Ochi, S, Katunuma, N, Miyano, M, Sakurai, J, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-02-02
公開日2006-05-02
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural Basis of the Sphingomyelin Phosphodiesterase Activity in Neutral Sphingomyelinase from Bacillus cereus.
J.Biol.Chem., 281, 2006
2DTY
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BU of 2dty by Molmil
Crystal structure of basic winged bean lectin complexed with N-acetyl-D-galactosamine
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, Basic agglutinin, CALCIUM ION, ...
著者Kulkarni, K.A, Katiyar, S, Surolia, A, Vijayan, M, Suguna, K.
登録日2006-07-19
公開日2006-11-07
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural basis for the carbohydrate-specificity of basic winged-bean lectin and its differential affinity for Gal and GalNAc
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2DV9
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BU of 2dv9 by Molmil
Crystal structure of peanut lectin GAL-BETA-1,3-GAL complex
分子名称: CALCIUM ION, Galactose-binding lectin, MANGANESE (II) ION, ...
著者Natchiar, S.K, Srinivas, O, Mitra, N, Surolia, A, Jayaraman, N, Vijayan, M.
登録日2006-07-30
公開日2006-11-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structural studies on peanut lectin complexed with disaccharides involving different linkages: further insights into the structure and interactions of the lectin
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
1VEI
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BU of 1vei by Molmil
Mycobacterium smegmatis Dps
分子名称: FE (III) ION, SULFATE ION, starvation-induced DNA protecting protein
著者Roy, S, Gupta, S, Das, S, Sekar, K, Chatterji, D, Vijayan, M.
登録日2004-03-31
公開日2004-06-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献X-ray Analysis of Mycobacterium smegmatis Dps and a Comparative Study Involving Other Dps and Dps-like Molecules
J.Mol.Biol., 339, 2004
2BM2
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human beta-II tryptase in complex with 4-(3-Aminomethyl-phenyl)- piperidin-1-yl-(5-phenethyl- pyridin-3-yl)-methanone
分子名称: 1-[3-(1-{[5-(2-PHENYLETHYL)PYRIDIN-3-YL]CARBONYL}PIPERIDIN-4-YL)PHENYL]METHANAMINE, HUMAN BETA2 TRYPTASE
著者Maignan, S, Guilloteau, J.-P, Dupuy, A, Levell, J, Astles, P, Eastwood, P, Cairns, J, Houille, O, Aldous, S, Merriman, G, Whiteley, B, Pribish, J, Czekaj, M, Liang, G, Davidson, J, Harrison, T, Morley, A, Watson, S, Fenton, G, Mccarthy, C, Romano, J, Mathew, R, Engers, D, Gardyan, M, Sides, K, Kwong, J, Tsay, J, Rebello, S, Shen, L, Wang, J, Luo, Y, Giardino, O, Lim, H.-K, Smith, K, Pauls, H.
登録日2005-03-09
公開日2005-03-22
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure Based Design of 4-(3-Aminomethylphenyl) Piperidinyl-1-Amides: Novel, Potent, Selective, and Orally Bioavailable Inhibitors of Bii Tryptase
Bioorg.Med.Chem., 13, 2005
5ZRG
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BU of 5zrg by Molmil
M. smegmatis antimutator protein MutT2 in complex with dCMP
分子名称: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, Putative mutator protein MutT2/NUDIX hydrolase
著者Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
登録日2018-04-24
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018
5ZRP
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M. smegmatis antimutator protein MutT2 form 3
分子名称: Putative mutator protein MutT2/NUDIX hydrolase
著者Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
登録日2018-04-24
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018
2DTW
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Crystal Structure of basic winged bean lectin in complex with 2Me-O-D-Galactose
分子名称: 2-O-methyl-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kulkarni, K.A, Katiyar, S, Surolia, A, Vijayan, M, Suguna, K.
登録日2006-07-18
公開日2006-11-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for the carbohydrate-specificity of basic winged-bean lectin and its differential affinity for Gal and GalNAc
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2DVA
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Crystal structure of peanut lectin GAL-BETA-1,3-GALNAC-ALPHA-O-ME (Methyl-T-antigen) complex
分子名称: CALCIUM ION, Galactose-binding lectin, MANGANESE (II) ION, ...
著者Natchiar, S.K, Srinivas, O, Mitra, N, Surolia, A, Jayaraman, N, Vijayan, M.
登録日2006-07-30
公開日2006-11-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural studies on peanut lectin complexed with disaccharides involving different linkages: further insights into the structure and interactions of the lectin
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
5ZRK
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M. smegmatis antimutator protein MutT2 in complex with dCTP
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, Putative mutator protein MutT2/NUDIX hydrolase
著者Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
登録日2018-04-24
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018
2DVG
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Crystal structure of peanut lectin GAL-ALPHA-1,6-GLC complex
分子名称: CALCIUM ION, Galactose-binding lectin, MANGANESE (II) ION, ...
著者Natchiar, S.K, Srinivas, O, Mitra, N, Surolia, A, Jayaraman, N, Vijayan, M.
登録日2006-07-31
公開日2006-11-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Structural studies on peanut lectin complexed with disaccharides involving different linkages: further insights into the structure and interactions of the lectin
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2OFO
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BU of 2ofo by Molmil
MSrecA-native
分子名称: PHOSPHATE ION, Protein recA
著者Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M.
登録日2007-01-04
公開日2007-06-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.16 Å)
主引用文献Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA
J.Mol.Biol., 367, 2007
2DU0
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Crystal structure of basic winged bean lectin in complex with Alpha-D-galactose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Basic agglutinin, CALCIUM ION, ...
著者Kulkarni, K.A, Katiyar, S, Surolia, A, Vijayan, M, Suguna, K.
登録日2006-07-19
公開日2006-11-07
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for the carbohydrate-specificity of basic winged-bean lectin and its differential affinity for Gal and GalNAc
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
5ZRI
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M. smegmatis antimutator protein MutT2 in complex with 5m-dCMP
分子名称: MAGNESIUM ION, Putative mutator protein MutT2/NUDIX hydrolase, [(2R,3S,5R)-5-(4-azanyl-5-methyl-pyrimidin-1-ium-1-yl)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate
著者Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
登録日2018-04-24
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018
5ZRC
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Structural insights into the catalysis mechanism of M. smegmatis antimutator protein MutT2
分子名称: 1,2-ETHANEDIOL, Putative mutator protein MutT2/NUDIX hydrolase
著者Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
登録日2018-04-24
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018

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