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PDB: 895 件

6M65
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Crystal structure of Mycobacterium smegmatis MutT1 in complex with GMPPNP (GDP)
分子名称: 1,2-ETHANEDIOL, GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, ...
著者Raj, P, Karthik, S, Arif, S.M, Varshney, U, Vijayan, M.
登録日2020-03-13
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Plasticity, ligand conformation and enzyme action of Mycobacterium smegmatis MutT1.
Acta Crystallogr D Struct Biol, 76, 2020
1V3V
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Crystal structure of leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase complexed with NADP and 15-oxo-PGE2
分子名称: (5E,13E)-11-HYDROXY-9,15-DIOXOPROSTA-5,13-DIEN-1-OIC ACID, CHLORIDE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Hori, T, Yokomizo, T, Ago, H, Sugahara, M, Ueno, G, Yamamoto, M, Kumasaka, T, Shimizu, T, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-11-06
公開日2004-07-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of leukotriene B4 12-hydroxydehydrogenase/15-Oxo-prostaglandin 13-reductase catalytic mechanism and a possible Src homology 3 domain binding loop
J.Biol.Chem., 279, 2004
1JY7
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THE STRUCTURE OF HUMAN METHEMOGLOBIN. THE VARIATION OF A THEME
分子名称: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
著者Biswal, B.K, Vijayan, M.
登録日2001-09-11
公開日2002-03-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structures of human oxy- and deoxyhaemoglobin at different levels of humidity: variability in the T state.
Acta Crystallogr.,Sect.D, 58, 2002
5AHW
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Crystal structure of universal stress protein MSMEG_3811 in complex with cAMP
分子名称: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CHLORIDE ION, ...
著者Adolph, R.S, Kleinboelting, S, Weyand, M, Steegborn, C.
登録日2015-02-10
公開日2015-04-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A Universal Stress Protein (Usp) in Mycobacteria Binds Camp
J.Biol.Chem., 290, 2015
1ODI
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Purine nucleoside phosphorylase from Thermus Thermophilus
分子名称: ADENOSINE, PURINE NUCLEOSIDE PHOSPHORYLASE, SULFATE ION
著者Tahirov, T.H, Inagaki, E, Miyano, M.
登録日2003-02-19
公開日2003-02-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of Purine Nucleoside Phosphorylase from Thermus Thermophilus
J.Mol.Biol., 337, 2004
1LFL
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DEOXY HEMOGLOBIN (90% RELATIVE HUMIDITY)
分子名称: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
著者Biswal, B.K, Vijayan, M.
登録日2002-04-11
公開日2002-10-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structures of human oxy- and deoxyhaemoglobin at different levels of humidity: variability in the T state.
Acta Crystallogr.,Sect.D, 58, 2002
1J1Y
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Crystal Structure of PaaI from Thermus thermophilus HB8
分子名称: CHLORIDE ION, MAGNESIUM ION, PaaI protein
著者Kunishima, N, Sugahara, M, Kuramitsu, S, Yokoyama, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-12-24
公開日2004-02-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A Novel Induced-fit Reaction Mechanism of Asymmetric Hot Dog Thioesterase PaaI
J.Mol.Biol., 352, 2005
1LMA
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PROTEIN HYDRATION AND WATER STRUCTURE: X-RAY ANALYSIS OF A CLOSELY PACKED PROTEIN CRYSTAL WITH VERY LOW SOLVENT CONTENT
分子名称: HEN EGG WHITE LYSOZYME, NITRATE ION
著者Madhusudan, Kodandapani, R, Vijayan, M.
登録日1992-08-14
公開日1994-01-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Protein hydration and water structure: X-ray analysis of a closely packed protein crystal with very low solvent content.
Acta Crystallogr.,Sect.D, 49, 1993
3RBB
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BU of 3rbb by Molmil
HIV-1 NEF protein in complex with engineered HCK SH3 domain
分子名称: 1,2-ETHANEDIOL, Protein Nef, Tyrosine-protein kinase HCK
著者Horenkamp, F.A, Schulte, A, Weyand, M, Geyer, M.
登録日2011-03-29
公開日2011-04-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Conformation of the Dileucine-Based Sorting Motif in HIV-1 Nef Revealed by Intermolecular Domain Assembly.
Traffic, 12, 2011
4FWI
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BU of 4fwi by Molmil
Crystal structure of the nucleotide-binding domain of a dipeptide ABC transporter
分子名称: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Li, X, Ge, J, Yang, M, Wang, N.
登録日2012-07-01
公開日2013-01-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.892 Å)
主引用文献Structure of the nucleotide-binding domain of a dipeptide ABC transporter reveals a novel iron-sulfur cluster-binding domain
Acta Crystallogr.,Sect.D, 69, 2013
1RHA
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WATER DEPENDENT DOMAIN MOTION AND FLEXIBILITY IN RIBONUCLEASE A AND THE INVARIANT FEATURES IN ITS HYDRATION SHELL. AN X-RAY STUDY OF TWO LOW HUMIDITY CRYSTAL FORMS OF THE ENZYME
分子名称: RIBONUCLEASE A
著者Radha Kishan, K.V, Chandra, N.R, Sudarsanakumar, C, Suguna, K, Vijayan, M.
登録日1994-11-13
公開日1995-02-27
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Water-dependent domain motion and flexibility in ribonuclease A and the invariant features in its hydration shell. An X-ray study of two low-humidity crystal forms of the enzyme.
Acta Crystallogr.,Sect.D, 51, 1995
1RHB
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WATER DEPENDENT DOMAIN MOTION AND FLEXIBILITY IN RIBONUCLEASE A AND THE INVARIANT FEATURES IN ITS HYDRATION SHELL. AN X-RAY STUDY OF TWO LOW HUMIDITY CRYSTAL FORMS OF THE ENZYME
分子名称: RIBONUCLEASE A
著者Radha Kishan, K.V, Chandra, N.R, Sudarsanakumar, C, Suguna, K, Vijayan, M.
登録日1994-11-13
公開日1995-02-27
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Water-dependent domain motion and flexibility in ribonuclease A and the invariant features in its hydration shell. An X-ray study of two low-humidity crystal forms of the enzyme.
Acta Crystallogr.,Sect.D, 51, 1995
3SD4
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BU of 3sd4 by Molmil
Crystal structure of the first Tudor domain of human PHF20
分子名称: PHD finger protein 20
著者Cui, G, Botuyan, M.V, Thompson, J.R, Mer, G.
登録日2011-06-08
公開日2011-06-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.928 Å)
主引用文献PHF20 is an effector protein of p53 double lysine methylation that stabilizes and activates p53.
Nat.Struct.Mol.Biol., 19, 2012
1UBF
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MsREcA-ATPgS complex
分子名称: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, RecA
著者Datta, S, Krishna, R, Ganesh, N, Chandra, N.R, Muniyappa, K, Vijayan, M.
登録日2003-04-04
公開日2003-07-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal Structures of Mycobacterium smegmatis RecA and Its Nucleotide Complexes
J.BACTERIOL., 185, 2003
3DPU
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RocCOR domain tandem of Rab family protein (Roco)
分子名称: Rab family protein
著者Gotthardt, K, Weyand, M, Kortholt, A, Van Haastert, P.J.M, Wittinghofer, A.
登録日2008-07-09
公開日2008-08-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of the Roc-COR domain tandem of C. tepidum, a prokaryotic homologue of the human LRRK2 Parkinson kinase
Embo J., 27, 2008
1HIS
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Structure and dynamics of des-pentapeptide-insulin in solution: the molten-globule hypothesis.
分子名称: INSULIN
著者Hua, Q.X, Kochoyan, M, Weiss, M.A.
登録日1992-02-28
公開日1994-01-31
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Structure and dynamics of des-pentapeptide-insulin in solution: the molten-globule hypothesis.
Proc.Natl.Acad.Sci.USA, 89, 1992
3DPT
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BU of 3dpt by Molmil
COR domain of Rab family protein (Roco)
分子名称: Rab family protein
著者Gotthardt, K, Weyand, M, Kortholt, A, Van Haastert, P.J.M, Wittinghofer, A.
登録日2008-07-09
公開日2008-08-12
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of the Roc-COR domain tandem of C. tepidum, a prokaryotic homologue of the human LRRK2 Parkinson kinase
Embo J., 27, 2008
3MIT
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BU of 3mit by Molmil
Structure of Banana lectin-alpha-D-mannose complex
分子名称: HEXANE-1,6-DIOL, Lectin, ZINC ION, ...
著者Sharma, A, Vijayan, M.
登録日2010-04-12
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Influence of glycosidic linkage on the nature of carbohydrate binding in beta-prism I fold lectins: an X-ray and molecular dynamics investigation on banana lectin-carbohydrate complexes
Glycobiology, 21, 2011
1UBG
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MsREcA-dATP complex
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, RecA
著者Datta, S, Krishna, R, Ganesh, N, Chandra, N.R, Muniyappa, K, Vijayan, M.
登録日2003-04-04
公開日2003-07-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal Structures of Mycobacterium smegmatis RecA and Its Nucleotide Complexes
J.BACTERIOL., 185, 2003
7F5Y
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Crystal structure of the single-stranded dna-binding protein from Mycobacterium tuberculosis- Form III
分子名称: FORMIC ACID, Single-stranded DNA-binding protein
著者Srikalaivani, R, Paul, A, Sriram, R, Narayanan, S, Gopal, B, Vijayan, M.
登録日2021-06-23
公開日2022-05-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural variability of Mycobacterium tuberculosis SSB and susceptibility to inhibition.
Curr.Sci., 122, 2022
7F5Z
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Crystal structure of the single-stranded dna-binding protein from Mycobacterium tuberculosis- Form III
分子名称: Single-stranded DNA-binding protein
著者Srikalaivani, R, Paul, A, Sriram, R, Narayanan, S, Gopal, B, Vijayan, M.
登録日2021-06-23
公開日2022-05-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural variability of Mycobacterium tuberculosis SSB and susceptibility to inhibition.
Curr.Sci., 122, 2022
3MIU
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BU of 3miu by Molmil
Structure of Banana Lectin-pentamannose complex
分子名称: HEXANE-1,6-DIOL, Lectin, ZINC ION, ...
著者Sharma, A, Vijayan, M.
登録日2010-04-12
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Influence of glycosidic linkage on the nature of carbohydrate binding in beta-prism I fold lectins: an X-ray and molecular dynamics investigation on banana lectin-carbohydrate complexes
Glycobiology, 21, 2011
7LYC
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BU of 7lyc by Molmil
Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A Lys13 and Lys15 in complex with BARD1 (residues 415-777)
分子名称: BRCA1-associated RING domain protein 1, DNA (146-MER), DNA (147-MER), ...
著者Hu, Q, Botuyan, M.V, Zhao, D, Cui, D, Mer, E, Mer, G.
登録日2021-03-06
公開日2021-06-16
最終更新日2021-09-01
実験手法ELECTRON MICROSCOPY (2.94 Å)
主引用文献Mechanisms of BRCA1-BARD1 nucleosome recognition and ubiquitylation.
Nature, 596, 2021
7LYA
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Cryo-EM structure of the human nucleosome core particle with linked histone proteins H2A and H2B
分子名称: DNA (146-MER), DNA (147-MER), Histone H2A type 1-B/E, ...
著者Hu, Q, Botuyan, M.V, Zhao, D, Cui, D, Mer, E, Mer, G.
登録日2021-03-06
公開日2021-07-28
最終更新日2021-09-01
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献Mechanisms of BRCA1-BARD1 nucleosome recognition and ubiquitylation.
Nature, 596, 2021
4CLP
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Crystal structure of human soluble Adenylyl Cyclase complex with adenosine-3',5'-cyclic-monophosphate
分子名称: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, ...
著者Kleinboelting, S, Weyand, M, Steegborn, C.
登録日2014-01-15
公開日2014-03-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structures of Human Soluble Adenylyl Cyclase Reveal Mechanisms of Catalysis and of its Activation Through Bicarbonate.
Proc.Natl.Acad.Sci.USA, 111, 2014

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