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PDB: 904 results

5ZRL
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BU of 5zrl by Molmil
M. smegmatis antimutator protein MutT2 in complex with CDP
Descriptor: 1,2-ETHANEDIOL, CYTIDINE-5'-DIPHOSPHATE, Putative mutator protein MutT2/NUDIX hydrolase
Authors:Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
Deposit date:2018-04-24
Release date:2019-04-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018
5ZRH
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BU of 5zrh by Molmil
M. smegmatis antimutator protein MutT2 in complex with CMP
Descriptor: 1,2-ETHANEDIOL, CYTIDINE-5'-MONOPHOSPHATE, Putative mutator protein MutT2/NUDIX hydrolase
Authors:Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
Deposit date:2018-04-24
Release date:2019-04-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018
2CLE
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BU of 2cle by Molmil
Tryptophan Synthase in complex with N-(4'-trifluoromethoxybenzoyl)-2- amino-1-ethylphosphate (F6) - lowF6 complex
Descriptor: 2-{[4-(TRIFLUOROMETHOXY)BENZOYL]AMINO}ETHYL DIHYDROGEN PHOSPHATE, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, ...
Authors:Ngo, H, Harris, R, Kimmich, N, Casino, P, Niks, D, Blumenstein, L, Barends, T.R, Kulik, V, Weyand, M, Schlichting, I, Dunn, M.F.
Deposit date:2006-04-27
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Synthesis and Characterization of Allosteric Probes of Substrate Channeling in the Tryptophan Synthase Bienzyme Complex.
Biochemistry, 46, 2007
2CLK
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BU of 2clk by Molmil
Tryptophan Synthase in complex with D-glyceraldehyde 3-phosphate (G3P)
Descriptor: GLYCERALDEHYDE-3-PHOSPHATE, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, ...
Authors:Ngo, H, Harris, R, Kimmich, N, Casino, P, Niks, D, Blumenstein, L, Barends, T.R, Kulik, V, Weyand, M, Schlichting, I, Dunn, M.F.
Deposit date:2006-04-27
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Synthesis and Characterization of Allosteric Probes of Substrate Channeling in the Tryptophan Synthase Bienzyme Complex.
Biochemistry, 46, 2007
2OEP
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BU of 2oep by Molmil
MSrecA-ADP-complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Protein recA
Authors:Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M.
Deposit date:2006-12-31
Release date:2007-06-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA
J.Mol.Biol., 367, 2007
1VEL
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BU of 1vel by Molmil
Mycobacterium smegmatis Dps tetragonal form
Descriptor: CADMIUM ION, SODIUM ION, SULFATE ION, ...
Authors:Roy, S, Gupta, S, Das, S, Sekar, K, Chatterji, D, Vijayan, M.
Deposit date:2004-04-01
Release date:2004-06-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:X-ray analysis of Mycobacterium smegmatis Dps and a comparative study involving other Dps and Dps-like molecules
J.Mol.Biol., 339, 2004
1NZA
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BU of 1nza by Molmil
Divalent cation tolerance protein (Cut A1) from thermus thermophilus HB8
Descriptor: CHLORIDE ION, Divalent cation tolerance protein, GLYCEROL, ...
Authors:Bagautdinov, B, Miyano, M, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-02-17
Release date:2003-03-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The structures of the CutA1 proteins from Thermus thermophilus and Pyrococcus horikoshii: characterization of metal-binding sites and metal-induced assembly.
Acta Crystallogr.,Sect.F, 70, 2014
1YMR
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BU of 1ymr by Molmil
The study of reductive unfolding pathways of RNase A (Y92A mutant)
Descriptor: Ribonuclease pancreatic
Authors:Xu, G, Narayan, M, Kurinov, I, Ripoll, D.R, Welker, E, Khalili, M, Ealick, S.E, Scheraga, H.A.
Deposit date:2005-01-21
Release date:2006-01-31
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A localized specific interaction alters the unfolding pathways of structural homologues.
J.Am.Chem.Soc., 128, 2006
1YMN
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BU of 1ymn by Molmil
The study of reductive unfolding pathways of RNase A (Y92L mutant)
Descriptor: Ribonuclease pancreatic
Authors:Xu, G, Narayan, M, Kurinov, I, Ripoll, D.R, Welker, E, Khalili, M, Ealick, S.E, Scheraga, H.A.
Deposit date:2005-01-21
Release date:2006-01-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A localized specific interaction alters the unfolding pathways of structural homologues.
J.Am.Chem.Soc., 128, 2006
2ODW
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BU of 2odw by Molmil
MSrecA-ATP-GAMA-S complex
Descriptor: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Protein recA
Authors:Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M.
Deposit date:2006-12-27
Release date:2007-06-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA
J.Mol.Biol., 367, 2007
5XD2
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BU of 5xd2 by Molmil
Crystal structure of Mycobacterium smegmatis MutT1 in complex with Ap5A, ATP and manganese
Descriptor: ADENOSINE-5'-PENTAPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
Authors:Arif, S.M, Varshney, U, Vijayan, M.
Deposit date:2017-03-24
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Hydrolysis of diadenosine polyphosphates. Exploration of an additional role of Mycobacterium smegmatis MutT1
J. Struct. Biol., 199, 2017
2O02
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BU of 2o02 by Molmil
Phosphorylation independent interactions between 14-3-3 and Exoenzyme S: from structure to pathogenesis
Descriptor: 14-3-3 protein zeta/delta, BENZOIC ACID, ExoS (416-430) peptide
Authors:Ottmann, C, Yasmin, L, Weyand, M, Hauser, A.R, Wittinghofer, A, Hallberg, B.
Deposit date:2006-11-27
Release date:2007-11-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Phosphorylation-independent interaction between 14-3-3 and exoenzyme S: from structure to pathogenesis
Embo J., 26, 2007
2ODN
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BU of 2odn by Molmil
MSRECA-dATP complex
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, Protein recA
Authors:Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M.
Deposit date:2006-12-24
Release date:2007-06-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA
J.Mol.Biol., 367, 2007
2OE2
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BU of 2oe2 by Molmil
MSrecA-native-low humidity 95%
Descriptor: PHOSPHATE ION, Protein recA
Authors:Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M.
Deposit date:2006-12-28
Release date:2007-06-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA
J.Mol.Biol., 367, 2007
5ZRO
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BU of 5zro by Molmil
M. smegmatis antimutator protein MutT2 in complex with 5mdCTP
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXY-5-METHYLCYTIDINE 5'-(TETRAHYDROGEN TRIPHOSPHATE), Putative mutator protein MutT2/NUDIX hydrolase
Authors:Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
Deposit date:2018-04-24
Release date:2019-04-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018
7WAP
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BU of 7wap by Molmil
Mevo lectin mutant D134A
Descriptor: Mevo lectin
Authors:Sivaji, N, Vijayan, M.
Deposit date:2021-12-14
Release date:2022-12-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Mevo lectin mutant D134A
To Be Published
2G88
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BU of 2g88 by Molmil
MSRECA-dATP COMPLEX
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CITRIC ACID, MAGNESIUM ION, ...
Authors:Krishna, R, Manjunath, G.P, Kumar, P, Surolia, A, Chandra, N.R, Muniyappa, K, Vijayan, M.
Deposit date:2006-03-02
Release date:2006-05-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystallographic identification of an ordered C-terminal domain and a second nucleotide-binding site in RecA: new insights into allostery.
Nucleic Acids Res., 34, 2006
4OIZ
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BU of 4oiz by Molmil
Structure, interactions and evolutionary implications of a domain-swapped lectin dimer from Mycobacterium smegmatis
Descriptor: LysM domain protein, methyl alpha-D-mannopyranoside
Authors:Patra, D, Mishra, P, Surolia, A, Vijayan, M.
Deposit date:2014-01-20
Release date:2014-07-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structure, interactions and evolutionary implications of a domain-swapped lectin dimer from Mycobacterium smegmatis.
Glycobiology, 24, 2014
1UIY
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BU of 1uiy by Molmil
Crystal Structure of Enoyl-CoA Hydratase from Thermus Thermophilus HB8
Descriptor: 1,4-DIETHYLENE DIOXIDE, Enoyl-CoA Hydratase, GLYCEROL
Authors:Bagautdinov, B, Kuramitsu, S, Yokoyama, S, Miyano, M, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-24
Release date:2003-08-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of enoyl-CoA hydratase from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 77, 2021
1UKK
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BU of 1ukk by Molmil
Structure of Osmotically Inducible Protein C from Thermus thermophilus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Osmotically Inducible Protein C
Authors:Rehse, P.H, Kuramitsu, S, Yokoyama, S, Miyano, M, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-24
Release date:2004-05-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystallographic Structure and Biochemical Analysis of the Thermus thermophilus Osmotically Inducible Protein C
J.MOL.BIOL., 338, 2004
5XLV
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BU of 5xlv by Molmil
Mycobacterium tuberculosis Pantothenate kinase mutant F254A
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Pantothenate kinase, ...
Authors:Paul, A, Kumar, P, Surolia, A, Vijayan, M.
Deposit date:2017-05-11
Release date:2018-05-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Biochemical and structural studies of mutants indicate concerted movement of the dimer interface and ligand-binding region of Mycobacterium tuberculosis pantothenate kinase
Acta Crystallogr F Struct Biol Commun, 73, 2017
2OES
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BU of 2oes by Molmil
MSrecA-native-SSB
Descriptor: PHOSPHATE ION, Protein recA
Authors:Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M.
Deposit date:2007-01-01
Release date:2007-06-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA
J.Mol.Biol., 367, 2007
2CLI
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BU of 2cli by Molmil
Tryptophan Synthase in complex with N-(4'- trifluoromethoxybenzenesulfonyl)-2-amino-1-ethylphosphate (F9)
Descriptor: 2-({[4-(TRIFLUOROMETHOXY)PHENYL]SULFONYL}AMINO)ETHYL DIHYDROGEN PHOSPHATE, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, ...
Authors:Ngo, H, Harris, R, Kimmich, N, Casino, P, Niks, D, Blumenstein, L, Barends, T.R, Kulik, V, Weyand, M, Schlichting, I, Dunn, M.F.
Deposit date:2006-04-27
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Synthesis and Characterization of Allosteric Probes of Substrate Channeling in the Tryptophan Synthase Bienzyme Complex.
Biochemistry, 46, 2007
2E7T
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BU of 2e7t by Molmil
Crystal structure of basic winged bean lectin in complex with a blood group trisaccharide
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Basic agglutinin, ...
Authors:Kulkarni, K.A, Katiyar, S, Surolia, A, Vijayan, M, Suguna, K.
Deposit date:2007-01-13
Release date:2007-06-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Generation of blood group specificity: New insights from structural studies on the complexes of A- and B-reactive saccharides with basic winged bean agglutinin
Proteins, 68, 2007
2E53
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BU of 2e53 by Molmil
Crystal structure of basic winged bean lectin in complex with B blood group disaccharide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Basic agglutinin, CALCIUM ION, ...
Authors:Kulkarni, K.A, Katiyar, S, Surolia, A, Vijayan, M, Suguna, K.
Deposit date:2006-12-18
Release date:2007-06-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Generation of blood group specificity: new insights from structural studies on the complexes of A- and B-reactive saccharides with basic winged bean agglutinin.
Proteins, 68, 2007

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