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PDB: 84 results

3B08
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BU of 3b08 by Molmil
Crystal structure of the mouse HOIL1-L-NZF in complex with linear di-ubiquitin
Descriptor: Polyubiquitin-C, RanBP-type and C3HC4-type zinc finger-containing protein 1, ZINC ION, ...
Authors:Sato, Y, Fujita, H, Yoshikawa, A, Yamashita, M, Yamagata, A, Kaiser, S.E, Iwai, K, Fukai, S.
Deposit date:2011-06-07
Release date:2011-12-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Specific recognition of linear ubiquitin chains by the Npl4 zinc finger (NZF) domain of the HOIL-1L subunit of the linear ubiquitin chain assembly complex
Proc.Natl.Acad.Sci.USA, 108, 2011
3B0A
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BU of 3b0a by Molmil
Crystal structure of the mouse HOIL1-L-NZF in complex with linear di-ubiquitin
Descriptor: Polyubiquitin-C, RanBP-type and C3HC4-type zinc finger-containing protein 1, TRIS(HYDROXYETHYL)AMINOMETHANE, ...
Authors:Sato, Y, Fujita, H, Yoshikawa, A, Yamashita, M, Yamagata, A, Kaiser, S.E, Iwai, K, Fukai, S.
Deposit date:2011-06-07
Release date:2011-12-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Specific recognition of linear ubiquitin chains by the Npl4 zinc finger (NZF) domain of the HOIL-1L subunit of the linear ubiquitin chain assembly complex
Proc.Natl.Acad.Sci.USA, 108, 2011
2ZNV
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BU of 2znv by Molmil
Crystal structure of human AMSH-LP DUB domain in complex with Lys63-linked ubiquitin dimer
Descriptor: 1,2-ETHANEDIOL, AMSH-like protease, Ubiquitin, ...
Authors:Sato, Y, Azusa, Y, Yamagata, A, Mimura, H, Wang, X, Yamashita, M, Ookata, K, Nureki, O, Iwai, K, Komada, M, Fukai, S.
Deposit date:2008-05-01
Release date:2008-09-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for specific cleavage of Lys 63-linked polyubiquitin chains
Nature, 455, 2008
2ZNR
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BU of 2znr by Molmil
Crystal structure of the DUB domain of human AMSH-LP
Descriptor: 1,2-ETHANEDIOL, AMSH-like protease, PRASEODYMIUM ION, ...
Authors:Sato, Y, Azusa, Y, Yamagata, A, Mimura, H, Wang, X, Yamashita, M, Ookata, K, Nureki, O, Iwai, K, Komada, M, Fukai, S.
Deposit date:2008-05-01
Release date:2008-09-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural basis for specific cleavage of Lys 63-linked polyubiquitin chains
Nature, 455, 2008
3B2E
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BU of 3b2e by Molmil
Crystal structure of S. cerevisiae Get3 in the open conformation in complex with Get1 cytosolic domain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase GET3, Golgi to ER traffic protein 1
Authors:Kubota, K, Yamagata, A, Fukai, S.
Deposit date:2011-07-30
Release date:2012-06-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Get1 stabilizes an open dimer conformation of get3 ATPase by binding two distinct interfaces
J.Mol.Biol., 422, 2012
6J7F
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BU of 6j7f by Molmil
Complex of GGTaseIII, farnesyl-Ykt6 (C-terminal methylated), and GGPP
Descriptor: DIPHOSPHATE, FARNESYL, GERAN-8-YL GERAN, ...
Authors:Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S.
Deposit date:2019-01-18
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.883 Å)
Cite:Complex of GGTaseIII, farnesyl-Ykt6 (C-terminal methylated), and GGPP
To Be Published
6J6X
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BU of 6j6x by Molmil
Crystal structure of apo GGTaseIII
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Geranylgeranyl transferase type-2 subunit beta, MAGNESIUM ION, ...
Authors:Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S.
Deposit date:2019-01-16
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.962 Å)
Cite:Crystal structure of apo GGTaseIII
To Be Published
6J74
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BU of 6j74 by Molmil
Complex of GGTaseIII and full-length Ykt6
Descriptor: Geranylgeranyl transferase type-2 subunit beta, PHOSPHATE ION, Protein prenyltransferase alpha subunit repeat-containing protein 1, ...
Authors:Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S.
Deposit date:2019-01-16
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.212 Å)
Cite:Complex of GGTaseIII and full-length Ykt6
To Be Published
6J7X
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BU of 6j7x by Molmil
Complex of GGTaseIII, farnesyl-Ykt6, and GGPP
Descriptor: FORMIC ACID, GERANYLGERANYL DIPHOSPHATE, Geranylgeranyl transferase type-2 subunit beta, ...
Authors:Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S.
Deposit date:2019-01-18
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Complex of GGTaseIII, farnesyl-Ykt6 (C-terminal methylated), and GGPP
To Be Published
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