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PDB: 251 件
3WIS
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BU of 3wis by Molmil
Crystal structure of Burkholderia xenovorans DmrB in complex with FMN: A Cubic Protein Cage for Redox Transfer
分子名称: FLAVIN MONONUCLEOTIDE, Putative dihydromethanopterin reductase (AfpA), SULFATE ION
著者Bobik, T.A, Cascio, D, Jorda, J, McNamara, D.E, Bustos, C, Wang, T.C, Rasche, M.E, Yeates, T.O.
登録日2013-09-25
公開日2014-02-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Structure of dihydromethanopterin reductase, a cubic protein cage for redox transfer
J.Biol.Chem., 289, 2014
4I7A
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BU of 4i7a by Molmil
GrpN pentameric microcompartment shell protein from Rhodospirillum rubrum
分子名称: CHLORIDE ION, Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
著者Wheatley, N.M, Gidaniyan, S.D, Cascio, D, Yeates, T.O.
登録日2012-11-30
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Bacterial microcompartment shells of diverse functional types possess pentameric vertex proteins.
Protein Sci., 22, 2013
3VCD
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BU of 3vcd by Molmil
Computationally Designed Self-assembling Octahedral Cage protein, O333, Crystallized in space group R32
分子名称: CHLORIDE ION, Propanediol utilization polyhedral body protein PduT, SULFATE ION
著者Sawaya, M.R, King, N.P, Sheffler, W, Baker, D, Yeates, T.O.
登録日2012-01-03
公開日2012-06-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Computational design of self-assembling protein nanomaterials with atomic level accuracy.
Science, 336, 2012
1KIB
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BU of 1kib by Molmil
cytochrome c6 from Arthrospira maxima: an assembly of 24 subunits in the form of an oblate shell
分子名称: HEME C, cytochrome c6
著者Kerfeld, C.A, Sawaya, M.R, Krogmann, D, Yeates, T.O.
登録日2001-12-03
公開日2002-07-03
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of cytochrome c6 from Arthrospira maxima: an assembly of 24 subunits in a nearly symmetric shell.
Acta Crystallogr.,Sect.D, 58, 2002
1YAC
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BU of 1yac by Molmil
THE 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE YCAC GENE PRODUCT FROM ESCHERICHIA COLI REVEALS AN OCTAMERIC HYDROLASE OF UNKNOWN SPECIFICITY
分子名称: YCAC GENE PRODUCT
著者Colovos, C, Cascio, D, Yeates, T.O.
登録日1998-07-29
公開日1999-02-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The 1.8 A crystal structure of the ycaC gene product from Escherichia coli reveals an octameric hydrolase of unknown specificity.
Structure, 6, 1998
2A1B
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BU of 2a1b by Molmil
Carboxysome shell protein ccmK2
分子名称: Carbon dioxide concentrating mechanism protein ccmK homolog 2
著者Kerfeld, C.A, Sawaya, M.R, Tanaka, S, Nguyen, C.V, Phillips, M, Beeby, M, Yeates, T.O.
登録日2005-06-20
公開日2005-08-09
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Protein structures forming the shell of primitive bacterial organelles
Science, 309, 2005
2A10
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BU of 2a10 by Molmil
carboxysome shell protein ccmK4
分子名称: Carbon dioxide concentrating mechanism protein ccmK homolog 4
著者Kerfeld, C.A, Sawaya, M.R, Tanaka, S, Nguyen, C.V, Phillips, M, Beeby, M, Yeates, T.O.
登録日2005-06-17
公開日2005-08-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Protein structures forming the shell of primitive bacterial organelles
Science, 309, 2005
2A5X
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BU of 2a5x by Molmil
Crystal Structure of a Cross-linked Actin Dimer
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Actin, alpha skeletal muscle, ...
著者Kudryashov, D.S, Sawaya, M.R, Adisetiyo, H, Norcross, T, Hegyi, G, Reisler, E, Yeates, T.O.
登録日2005-07-01
公開日2005-08-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献The crystal structure of a cross-linked actin dimer suggests a detailed molecular interface in F-actin
Proc.Natl.Acad.Sci.Usa, 102, 2005
2A18
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BU of 2a18 by Molmil
carboxysome shell protein ccmK4, crystal form 2
分子名称: AMMONIUM ION, Carbon dioxide concentrating mechanism protein ccmK homolog 4
著者Kerfeld, C.A, Sawaya, M.R, Tanaka, S, Nguyen, C.V, Phillips, M, Beeby, M, Yeates, T.O.
登録日2005-06-18
公開日2005-08-09
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Protein structures forming the shell of primitive bacterial organelles
Science, 309, 2005
8G3K
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BU of 8g3k by Molmil
Cryo-EM imaging scaffold subunits A and B used to display KRAS G12C complex with GDP
分子名称: Cob_adeno_trans domain-containing protein, Cryo-EM imaging scaffold subunit B with DARPin - RCG-33
著者Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
登録日2023-02-08
公開日2023-08-09
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G4F
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BU of 8g4f by Molmil
KRAS G12V complex with GDP imaged on a cryo-EM imaging scaffold
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
登録日2023-02-09
公開日2023-08-09
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G42
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BU of 8g42 by Molmil
KRAS G12C complex with GDP imaged on a cryo-EM imaging scaffold
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
登録日2023-02-08
公開日2023-08-09
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G47
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BU of 8g47 by Molmil
KRAS G12C complex with GDP and AMG 510 imaged on a cryo-EM imaging scaffold
分子名称: AMG 510 (bound form), GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
著者Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
登録日2023-02-08
公開日2023-08-09
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (3.19 Å)
主引用文献Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G4E
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BU of 8g4e by Molmil
Green Fluorescence Protein imaged on a cryo-EM imaging scaffold
分子名称: RCG-10 - Cryo-EM imaging scaffold subunit B fused to DARPin, Superfolder Green Fluorescent Protein
著者Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
登録日2023-02-09
公開日2023-08-09
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G4H
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BU of 8g4h by Molmil
KRAS G13C complex with GDP imaged on a cryo-EM imaging scaffold
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
登録日2023-02-09
公開日2023-08-09
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (2.87 Å)
主引用文献Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
4RCR
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BU of 4rcr by Molmil
STRUCTURE OF THE REACTION CENTER FROM RHODOBACTER SPHAEROIDES R-26 AND 2.4.1: PROTEIN-COFACTOR (BACTERIOCHLOROPHYLL, BACTERIOPHEOPHYTIN, AND CAROTENOID) INTERACTIONS
分子名称: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (III) ION, ...
著者Komiya, H, Yeates, T.O, Chirino, A.J, Rees, D.C, Allen, J.P, Feher, G.
登録日1991-09-09
公開日1993-10-31
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the reaction center from Rhodobacter sphaeroides R-26 and 2.4.1: protein-cofactor (bacteriochlorophyll, bacteriopheophytin, and carotenoid) interactions.
Proc.Natl.Acad.Sci.USA, 85, 1988
7MPW
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BU of 7mpw by Molmil
CmcB from Type II Cut MCP
分子名称: BMC domain-containing protein
著者Ochoa, J.M, Marshall, J.D, Sawaya, M.R, Yeates, T.O.
登録日2021-05-05
公開日2021-09-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.001 Å)
主引用文献Structural characterization of hexameric shell proteins from two types of choline-utilization bacterial microcompartments
Acta Crystallogr.,Sect.F, 77, 2021
7MGP
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BU of 7mgp by Molmil
CmcA from Type II Cut MCP
分子名称: BMC domain-containing protein
著者Ochoa, J.M, Escoto, X, Sawaya, M.R, Yeates, T.O.
登録日2021-04-13
公開日2021-09-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural characterization of hexameric shell proteins from two types of choline-utilization bacterial microcompartments
Acta Crystallogr.,Sect.F, 77, 2021
7MN4
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BU of 7mn4 by Molmil
CmcB E35G mutant from Type II Cut MCP
分子名称: BMC domain-containing protein
著者Ochoa, J.M, Mijares, O, Sawaya, M.R, Yeates, T.O.
登録日2021-04-30
公開日2021-09-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural characterization of hexameric shell proteins from two types of choline-utilization bacterial microcompartments
Acta Crystallogr.,Sect.F, 77, 2021
7MPV
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BU of 7mpv by Molmil
CmcC from Type II Cut MCP
分子名称: BMC domain-containing protein
著者Ochoa, J.M, Mijares, O, Sawaya, M.R, Yeates, T.O.
登録日2021-05-05
公開日2021-09-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.292 Å)
主引用文献Structural characterization of hexameric shell proteins from two types of choline-utilization bacterial microcompartments
Acta Crystallogr.,Sect.F, 77, 2021
7MPX
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BU of 7mpx by Molmil
CmcC E36G mutant from Type II Cut MCP
分子名称: BMC domain-containing protein, PHOSPHATE ION
著者Ochoa, J.M, Acosta, A.A, Sawaya, M.R, Yeates, T.O.
登録日2021-05-05
公開日2021-09-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural characterization of hexameric shell proteins from two types of choline-utilization bacterial microcompartments
Acta Crystallogr.,Sect.F, 77, 2021
7MMX
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BU of 7mmx by Molmil
CutN from Type I Cut MCP
分子名称: Propanediol utilization protein PduA, SULFATE ION
著者Ochoa, J.M, Sawaya, M.R, Yeates, T.O.
登録日2021-04-30
公開日2021-09-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural characterization of hexameric shell proteins from two types of choline-utilization bacterial microcompartments
Acta Crystallogr.,Sect.F, 77, 2021
8UJA
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BU of 8uja by Molmil
T33-fn10 - Designed Tetrahedral Protein Cage Using Fragment-based Hydrogen Bond Networks
分子名称: T33-fn10: engineered DrsE like sulfur reductase, T33-fn10: engineered enoyl-CoA hydratase/isomerase
著者Meador, K, Sawaya, M.R, Yeates, T.O.
登録日2023-10-11
公開日2024-03-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (6 Å)
主引用文献A suite of designed protein cages using machine learning and protein fragment-based protocols.
Structure, 2024
2HUK
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BU of 2huk by Molmil
Crystal structure of T4 Lysozyme V131C synthetic dimer
分子名称: Lysozyme, SULFATE ION
著者Banatao, D.R, Cascio, D, Yeates, T.O.
登録日2006-07-26
公開日2006-10-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献An approach to crystallizing proteins by synthetic symmetrization.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2HUM
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BU of 2hum by Molmil
Crystal structure of T4 Lysozyme D72C synthetic dimer
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Lysozyme
著者Banatao, D.R, Cascio, D, Yeates, T.O.
登録日2006-07-26
公開日2006-10-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献An approach to crystallizing proteins by synthetic symmetrization.
Proc.Natl.Acad.Sci.Usa, 103, 2006

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