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PDB: 125 results

5KK7
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BU of 5kk7 by Molmil
Crystal structure of the class I human endoplasmic reticulum 1,2-alpha-mannosidase T688A mutant and Thio-disaccharide substrate analog complex
Descriptor: 1,4-BUTANEDIOL, 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, ACETATE ION, ...
Authors:Karaveg, K, Xiang, Y, Moremen, K.W.
Deposit date:2016-06-21
Release date:2017-05-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7324 Å)
Cite:Substrate recognition and catalysis by GH47 alpha-mannosidases involved in Asn-linked glycan maturation in the mammalian secretory pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
4XFU
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BU of 4xfu by Molmil
Structure of IL-18 SER Mutant V
Descriptor: Interleukin-18
Authors:Krumm, B.E, Meng, X, Xiang, Y, Deng, J.
Deposit date:2014-12-29
Release date:2015-06-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystallization of interleukin-18 for structure-based inhibitor design.
Acta Crystallogr.,Sect.F, 71, 2015
4XFT
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BU of 4xft by Molmil
Structure of IL-18 SER Mutant III
Descriptor: DIMETHYL SULFOXIDE, Interleukin-18
Authors:Krumm, B.E, Meng, X, Xiang, Y, Deng, J.
Deposit date:2014-12-29
Release date:2015-06-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallization of interleukin-18 for structure-based inhibitor design.
Acta Crystallogr.,Sect.F, 71, 2015
4XFS
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BU of 4xfs by Molmil
Structure of IL-18 SER Mutant I
Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, Interleukin-18
Authors:Krumm, B.E, Meng, X, Xiang, Y, Deng, J.
Deposit date:2014-12-28
Release date:2015-06-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystallization of interleukin-18 for structure-based inhibitor design.
Acta Crystallogr.,Sect.F, 71, 2015
1T0Z
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BU of 1t0z by Molmil
Structure of an Excitatory Insect-specific Toxin with an Analgesic Effect on Mammalian from Scorpion Buthus martensii Karsch
Descriptor: SULFATE ION, insect neurotoxin
Authors:Li, C, Guan, R.-J, Xiang, Y, Zhang, Y, Wang, D.-C.
Deposit date:2004-04-14
Release date:2004-12-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of an excitatory insect-specific toxin with an analgesic effect on mammals from the scorpion Buthus martensii Karsch.
Acta Crystallogr.,Sect.D, 61, 2005
1U6T
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BU of 1u6t by Molmil
Crystal structure of the human SH3 binding glutamic-rich protein like
Descriptor: CITRIC ACID, SH3 domain-binding glutamic acid-rich-like protein
Authors:Yin, L, Xiang, Y, Yang, N, Zhu, D.-Y, Huang, R.-H, Wang, D.-C.
Deposit date:2004-08-01
Release date:2005-08-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of human SH3BGRL protein: the first structure of the human SH3BGR family representing a novel class of thioredoxin fold proteins
Proteins, 61, 2005
7KSP
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BU of 7ksp by Molmil
Crystal structure of hSAMD9_DBD with DNA
Descriptor: DNA, Sterile alpha motif domain-containing protein 9
Authors:Peng, S, Pathak, P, Xiang, Y, Deng, J.
Deposit date:2020-11-23
Release date:2022-01-05
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and function of an effector domain in antiviral factors and tumor suppressors SAMD9 and SAMD9L.
Proc.Natl.Acad.Sci.USA, 119, 2022
2WZS
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BU of 2wzs by Molmil
Structure of the Family GH92 Inverting Mannosidase BT3990 from Bacteroides thetaiotaomicron VPI-5482 in complex with Mannoimidazole
Descriptor: (5R,6R,7S,8R)-5-(HYDROXYMETHYL)-5,6,7,8-TETRAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL, CALCIUM ION, GLYCEROL, ...
Authors:Zhu, Y, Suits, M.D.L, Thompson, A, Chavan, S, Dinev, Z, Dumon, C, Smith, N, Moremen, K.W, Xiang, Y, Siriwardena, A, Williams, S.J, Gilbert, H.J, Davies, G.J.
Deposit date:2009-12-02
Release date:2009-12-29
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Mechanistic Insights Into a Ca2+-Dependent Family of A-Mannosidases in a Human Gut Symbiont.
Nat.Chem.Biol., 6, 2010
4U03
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BU of 4u03 by Molmil
Structure of the vibrio cholerae di-nucleotide cyclase (DncV) in complex with GTP and 5MTHFGLU2
Descriptor: Cyclic AMP-GMP synthase, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Zhu, D.Y, Xiang, Y.
Deposit date:2014-07-11
Release date:2014-09-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.041 Å)
Cite:Structural Biochemistry of a Vibrio cholerae Dinucleotide Cyclase Reveals Cyclase Activity Regulation by Folates.
Mol.Cell, 55, 2014
4U0M
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BU of 4u0m by Molmil
Structure of the Vibrio cholerae di-nucleotide cyclase (DncV) mutant D193N in complex with ATP, GTP and 5MTHFGLU2
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cyclic AMP-GMP synthase, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Zhu, D, Xiang, Y.
Deposit date:2014-07-12
Release date:2014-09-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Biochemistry of a Vibrio cholerae Dinucleotide Cyclase Reveals Cyclase Activity Regulation by Folates.
Mol.Cell, 55, 2014
7TA8
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BU of 7ta8 by Molmil
NMR structure of crosslinked cyclophilin A
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Lu, M, Toptygin, D, Xiang, Y, Shi, Y, Schwieters, C.D, Lipinski, E.C, Ahn, J, Byeon, I.-J.L, Gronenborn, A.M.
Deposit date:2021-12-20
Release date:2022-06-01
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The Magic of Linking Rings: Discovery of a Unique Photoinduced Fluorescent Protein Crosslink.
J.Am.Chem.Soc., 144, 2022
6QX7
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BU of 6qx7 by Molmil
The cryo-EM structure of connector in bacteriophage phi29 prohead
Descriptor: Portal protein
Authors:Xu, J, Gui, M, Xiang, Y.
Deposit date:2019-03-07
Release date:2019-06-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural assembly of the tailed bacteriophage φ29.
Nat Commun, 10, 2019
6QZ9
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BU of 6qz9 by Molmil
The cryo-EM structure of the collar complex and tail axis in bacteriophage phi29
Descriptor: Portal protein, Pre-neck appendage protein, Proximal tail tube connector protein
Authors:Xu, J, Wang, D, Gui, M, Xiang, Y.
Deposit date:2019-03-11
Release date:2019-06-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural assembly of the tailed bacteriophage φ29.
Nat Commun, 10, 2019
6QYZ
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BU of 6qyz by Molmil
The cryo-EM structure of prohead RNA in bacteriophage phi29 prohead
Descriptor: the prohead RNA (71-MER) in bacteriophage phi29
Authors:Xu, J, Wang, D, Gui, M, Xiang, Y.
Deposit date:2019-03-10
Release date:2019-06-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural assembly of the tailed bacteriophage φ29.
Nat Commun, 10, 2019
6QZ0
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BU of 6qz0 by Molmil
The cryo-EM structure of the head of the genome empited bacteriophage phi29
Descriptor: Capsid fiber protein, Major capsid protein
Authors:Xu, J, Wang, D, Gui, M, Xiang, Y.
Deposit date:2019-03-10
Release date:2019-06-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural assembly of the tailed bacteriophage φ29.
Nat Commun, 10, 2019
6QYM
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BU of 6qym by Molmil
The cryo-EM structure of the connector of the genome empited bacteriophage phi29
Descriptor: Portal protein
Authors:Xu, J, Wang, D, Gui, M, Xiang, Y.
Deposit date:2019-03-09
Release date:2019-06-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural assembly of the tailed bacteriophage φ29.
Nat Commun, 10, 2019
6QZF
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BU of 6qzf by Molmil
The cryo-EM structure of the collar complex and tail axis in genome emptied bacteriophage phi29
Descriptor: Portal protein, Pre-neck appendage protein, Proximal tail tube connector protein
Authors:Xu, J, Wang, D, Gui, M, Xiang, Y.
Deposit date:2019-03-11
Release date:2019-06-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural assembly of the tailed bacteriophage φ29.
Nat Commun, 10, 2019
6QVK
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BU of 6qvk by Molmil
The cryo-EM structure of bacteriophage phi29 prohead
Descriptor: Capsid fiber protein, Major capsid protein
Authors:Xu, J, Gui, M, Xiang, Y.
Deposit date:2019-03-03
Release date:2019-06-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural assembly of the tailed bacteriophage φ29.
Nat Commun, 10, 2019
6QYD
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BU of 6qyd by Molmil
Cryo-EM structure of the head in mature bacteriophage phi29
Descriptor: Capsid fiber protein, Major capsid protein
Authors:Xu, J.W, Wang, D.H, Gui, M, Xiang, Y.
Deposit date:2019-03-08
Release date:2019-06-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural assembly of the tailed bacteriophage φ29.
Nat Commun, 10, 2019
6QYY
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BU of 6qyy by Molmil
The crystal structure of head fiber gp8.5 N base in bacteriophage phi29
Descriptor: Capsid fiber protein, SULFATE ION
Authors:Xu, J, Wang, D, Gui, M, Xiang, Y.
Deposit date:2019-03-10
Release date:2019-06-12
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural assembly of the tailed bacteriophage φ29.
Nat Commun, 10, 2019
6QYJ
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BU of 6qyj by Molmil
The cryo-EM structure of the connector of the mature bacteriophage phi29
Descriptor: Portal protein
Authors:Xu, J, Wang, D, Gui, M, Xiang, Y.
Deposit date:2019-03-09
Release date:2019-06-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural assembly of the tailed bacteriophage φ29.
Nat Commun, 10, 2019
1X7I
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BU of 1x7i by Molmil
Crystal structure of the native copper homeostasis protein (cutCm) with calcium binding from Shigella flexneri 2a str. 301
Descriptor: CALCIUM ION, Copper homeostasis protein cutC
Authors:Zhu, D.Y, Zhu, Y.Q, Huang, R.H, Xiang, Y, Wang, D.C.
Deposit date:2004-08-14
Release date:2005-03-01
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the copper homeostasis protein (CutCm) from Shigella flexneri at 1.7 A resolution: The first structure of a new sequence family of TIM barrels
Proteins, 58, 2004
5CYW
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BU of 5cyw by Molmil
Crystal Structure of Vaccinia Virus C7
Descriptor: GLYCEROL, Interferon antagonist C7
Authors:Krumm, B.E, Meng, X, Li, Y, Xiang, Y, Deng, J.
Deposit date:2015-07-30
Release date:2015-11-18
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for antagonizing a host restriction factor by C7 family of poxvirus host-range proteins.
Proc.Natl.Acad.Sci.USA, 112, 2015
5CZ3
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BU of 5cz3 by Molmil
Crystal Structure of Myxoma Virus M64
Descriptor: BETA-MERCAPTOETHANOL, M64R
Authors:Krumm, B.E, Meng, X, Li, Y, Xiang, Y, Deng, J.
Deposit date:2015-07-31
Release date:2015-11-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for antagonizing a host restriction factor by C7 family of poxvirus host-range proteins.
Proc.Natl.Acad.Sci.USA, 112, 2015
3TXS
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BU of 3txs by Molmil
Crystal Structure of phage 44RR small terminase gp16
Descriptor: Terminase DNA packaging enzyme small subunit
Authors:Sun, S, Xiang, Y, Rossmann, M.G.
Deposit date:2011-09-23
Release date:2011-12-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structure and function of the small terminase component of the DNA packaging machine in T4-like bacteriophages.
Proc.Natl.Acad.Sci.USA, 109, 2012

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数据于2024-09-18公开中

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