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PDB: 281 件

3JA7
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Cryo-EM structure of the bacteriophage T4 portal protein assembly at near-atomic resolution
分子名称: Portal protein gp20
著者Sun, L, Zhang, X, Gao, S, Rao, P.A, Padilla-Sanchez, V, Chen, Z, Sun, S, Xiang, Y, Subramaniam, S, Rao, V.B, Rossmann, M.G.
登録日2015-04-21
公開日2015-07-22
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structure of the bacteriophage T4 portal protein assembly at near-atomic resolution.
Nat Commun, 6, 2015
3J2W
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Electron cryo-microscopy of Chikungunya virus
分子名称: Capsid protein, Glycoprotein E1, Glycoprotein E2
著者Sun, S, Xiang, Y, Rossmann, M.G.
登録日2013-01-28
公開日2013-04-24
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Structural analyses at pseudo atomic resolution of Chikungunya virus and antibodies show mechanisms of neutralization.
Elife, 2, 2013
3MUU
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Crystal structure of the Sindbis virus E2-E1 heterodimer at low pH
分子名称: Structural polyprotein, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Li, L, Jose, J, Xiang, Y, Kuhn, R.J, Rossmann, M.G.
登録日2010-05-03
公開日2010-11-24
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献Structural changes of envelope proteins during alphavirus fusion.
Nature, 468, 2010
3MUW
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Pseudo-atomic structure of the E2-E1 protein shell in Sindbis virus
分子名称: Structural polyprotein
著者Li, L, Jose, J, Xiang, Y, Kuhn, R.J, Rossmann, M.G.
登録日2010-05-03
公開日2010-11-24
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Structural changes of envelope proteins during alphavirus fusion.
Nature, 468, 2010
7XEY
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EDS1-PAD4 complexed with pRib-ADP
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5-O-phosphono-beta-D-ribofuranose, ADENOSINE-5'-DIPHOSPHATE, ...
著者Huang, S, Jia, A, Xiao, Y.
登録日2022-03-31
公開日2022-07-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Identification and receptor mechanism of TIR-catalyzed small molecules in plant immunity.
Science, 377, 2022
3J2Z
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Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab m10
分子名称: m10 heavy chain, m10 light chain
著者Sun, S, Xiang, Y, Rossmann, M.G.
登録日2013-01-28
公開日2013-04-24
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (16.9 Å)
主引用文献Structural analyses at pseudo atomic resolution of Chikungunya virus and antibodies show mechanisms of neutralization.
Elife, 2, 2013
3SJM
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Crystal Structure Analysis of TRF2-Dbd-DNA complex
分子名称: DNA (5'-D(*CP*TP*CP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP*CP*CP*CP*TP*AP*GP*A)-3'), Telomeric repeat-binding factor 2
著者Nair, S.K, Sliverman, S.K, Chen, J.H, Xiao, Y.
登録日2011-06-21
公開日2012-10-31
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Crystal Structure Analysis of TRF2-Dbd-DNA complex
To be Published
3VCP
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The 2.2 Angstrom structure of Stc2 with proline bound in the active site
分子名称: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, PROLINE, ...
著者Daughtry, K.D, Xiao, Y, Stoner-Ma, D, Cho, E, Orville, A.M, Liu, P, Allen, K.N.
登録日2012-01-04
公開日2012-02-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Quaternary Ammonium Oxidative Demethylation: X-ray Crystallographic, Resonance Raman, and UV-Visible Spectroscopic Analysis of a Rieske-Type Demethylase.
J.Am.Chem.Soc., 134, 2012
3VCA
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Quaternary Ammonium Oxidative Demethylation: X-ray Crystallographic, Resonance Raman and UV-visible Spectroscopic Analysis of a Rieske-type Demethylase
分子名称: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, GLYCEROL, ...
著者Daughtry, K.D, Xiao, Y, Stoner-Ma, D, Cho, E, Orville, A.M, Liu, P, Allen, K.N.
登録日2012-01-03
公開日2012-02-08
最終更新日2012-02-22
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Quaternary Ammonium Oxidative Demethylation: X-ray Crystallographic, Resonance Raman, and UV-Visible Spectroscopic Analysis of a Rieske-Type Demethylase.
J.Am.Chem.Soc., 134, 2012
6A7F
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The cryo-EM structure of filamentous bacteriophage IKe major coat protein p8 shell assembly.
分子名称: major coat protein p8
著者Xu, J.W, Dayan, N, Goldbourt, A, Xiang, Y.
登録日2018-07-03
公開日2019-02-27
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-electron microscopy structure of the filamentous bacteriophage IKe.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
3TXQ
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Crystal Structure of phage 44RR small terminase gp16
分子名称: Terminase DNA packaging enzyme small subunit
著者Sun, S, Xiang, Y, Rossmann, M.G.
登録日2011-09-23
公開日2011-12-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure and function of the small terminase component of the DNA packaging machine in T4-like bacteriophages.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TXS
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BU of 3txs by Molmil
Crystal Structure of phage 44RR small terminase gp16
分子名称: Terminase DNA packaging enzyme small subunit
著者Sun, S, Xiang, Y, Rossmann, M.G.
登録日2011-09-23
公開日2011-12-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structure and function of the small terminase component of the DNA packaging machine in T4-like bacteriophages.
Proc.Natl.Acad.Sci.USA, 109, 2012
8HFF
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Cryo-EM structure of human norepinephrine transporter NET in the presence of norepinephrine in an inward-open state at resolution of 2.9 angstrom.
分子名称: L-NOREPINEPHRINE, Sodium-dependent noradrenaline transporter
著者Tan, J, Xiao, Y, Kong, F, Lei, J, Yuan, Y, Yan, C.
登録日2022-11-10
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (2.86 Å)
主引用文献Molecular basis for the reuptake and inhibition of human norepinephrine transporter
To Be Published
8HFL
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Cryo-EM structure of human norepinephrine transporter NET in the presence of the antidepressant bupropion in an inward-open state at resolution of 3.0 angstrom.
分子名称: Bupropion, CHLORIDE ION, Sodium-dependent noradrenaline transporter
著者Tan, J, Xiao, Y, Kong, F, Lei, J, Yuan, Y, Yan, C.
登録日2022-11-11
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Molecular basis for the reuptake and inhibition of human norepinephrine transporter
To Be Published
8HFI
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Cryo-EM structure of human norepinephrine transporter NET in the presence of the antidepressant desipramine in an inward-open state at resolution of 2.5 angstrom.
分子名称: 3-(10,11-DIHYDRO-5H-DIBENZO[B,F]AZEPIN-5-YL)-N-METHYLPROPAN-1-AMINE, CHLORIDE ION, Sodium-dependent noradrenaline transporter
著者Tan, J, Xiao, Y, Kong, F, Lei, J, Yuan, Y, Yan, C.
登録日2022-11-10
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Molecular basis for the reuptake and inhibition of human norepinephrine transporter
To Be Published
8HFG
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Cryo-EM structure of human norepinephrine transporter NET in the presence of dopamine in an inward-open state at resolution of 3.0 angstrom.
分子名称: CHLORIDE ION, L-DOPAMINE, Sodium-dependent noradrenaline transporter
著者Tan, J, Xiao, Y, Kong, F, Lei, J, Yuan, Y, Yan, C.
登録日2022-11-10
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Molecular basis for the reuptake and inhibition of human norepinephrine transporter
To Be Published
8HFE
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BU of 8hfe by Molmil
Cryo-EM structure of human norepinephrine transporter NET in an inward-open state at resolution of 2.5 angstrom
分子名称: CHLORIDE ION, Sodium-dependent noradrenaline transporter
著者Tan, J, Xiao, Y, Kong, F, Lei, J, Yuan, Y, Yan, C.
登録日2022-11-10
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Molecular basis for the reuptake and inhibition of human norepinephrine transporter
To Be Published
8IVY
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BU of 8ivy by Molmil
Beta-Glucosidase BglA mutant E166Q in complex with glucose
分子名称: Beta-glucosidase, GLYCEROL, beta-D-glucopyranose
著者Dong, S, Xiao, Y, Feng, Y.
登録日2023-03-29
公開日2023-08-23
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Key roles of beta-glucosidase BglA for the catabolism of both laminaribiose and cellobiose in the lignocellulolytic bacterium Clostridium thermocellum.
Int.J.Biol.Macromol., 250, 2023
6KW1
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BU of 6kw1 by Molmil
The structure of the metallo-beta-lactamase VIM-2 in complex with a triazolylthioacetamide 1b
分子名称: 2-[3-[2-(1H-benzimidazol-2-ylamino)-2-oxidanylidene-ethyl]sulfanyl-1H-1,2,4-triazol-5-yl]benzoic acid, ACETATE ION, Beta-lactamase class B VIM-2, ...
著者Yang, K.W, Xiang, Y.
登録日2019-09-05
公開日2020-09-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.775212 Å)
主引用文献Kinetic, Thermodynamic, and Crystallographic Studies of 2-Triazolylthioacetamides as Verona Integron-Encoded Metallo-beta-Lactamase 2 (VIM-2) Inhibitor.
Biomolecules, 10, 2020
7EJV
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BU of 7ejv by Molmil
The co-crystal structure of DYRK2 with YK-2-69
分子名称: Dual specificity tyrosine-phosphorylation-regulated kinase 2, [6-[[4-[2-(dimethylamino)-1,3-benzothiazol-6-yl]-5-fluoranyl-pyrimidin-2-yl]amino]pyridin-3-yl]-(4-ethylpiperazin-1-yl)methanone
著者Li, Z, Xiao, Y, Yuan, K, Kuang, W, Xiuquan, Y, Yang, P.
登録日2021-04-02
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Targeting dual-specificity tyrosine phosphorylation-regulated kinase 2 with a highly selective inhibitor for the treatment of prostate cancer.
Nat Commun, 13, 2022
7WIF
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The THF-II riboswitch bound to H4B
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, RNA (50-MER)
著者Xu, L, Fang, X, Xiao, Y.
登録日2022-01-03
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WIE
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The THF-II riboswitch bound to 7DG
分子名称: 7-DEAZAGUANINE, RNA (50-MER)
著者Xu, L, Fang, X, Xiao, Y.
登録日2022-01-03
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WIA
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The apo-form of THF-II C22G riboswitch
分子名称: RNA (50-MER)
著者Xu, L, Fang, X, Xiao, Y.
登録日2022-01-03
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WII
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The THF-II riboswitch bound to NPR
分子名称: 2-AMINO-7,8-DIHYDRO-6-(1,2,3-TRIHYDROXYPROPYL)-4(1H)-PTERIDINONE, RNA (50-MER)
著者Xu, L, Fang, X, Xiao, Y.
登録日2022-01-03
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WI9
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The THF-II riboswitch bound to THF and soaking with SeUrea
分子名称: (6S)-5,6,7,8-TETRAHYDROFOLATE, RNA (50-MER), selenourea
著者Xu, L, Fang, X, Xiao, Y.
登録日2022-01-03
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023

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