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PDB: 187 results

3JU6
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BU of 3ju6 by Molmil
Crystal Structure of Dimeric Arginine Kinase in Complex with AMPPNP and Arginine
Descriptor: ARGININE, Arginine kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Wu, X, Ye, S, Guo, S, Yan, W, Bartlam, M, Rao, Z.
Deposit date:2009-09-14
Release date:2009-09-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural basis for a reciprocating mechanism of negative cooperativity in dimeric phosphagen kinase activity
Faseb J., 24, 2010
7DAC
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BU of 7dac by Molmil
Human RIPK3 amyloid fibril revealed by solid-state NMR
Descriptor: Receptor-interacting serine/threonine-protein kinase 3
Authors:Wu, X.L, Zhang, J, Dong, X.Q, Liu, J, Li, B, Hu, H, Wang, J, Wang, H.Y, Lu, J.X.
Deposit date:2020-10-16
Release date:2021-04-28
Last modified:2024-05-01
Method:SOLID-STATE NMR
Cite:The structure of a minimum amyloid fibril core formed by necroptosis-mediating RHIM of human RIPK3.
Proc.Natl.Acad.Sci.USA, 118, 2021
5DSE
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BU of 5dse by Molmil
Crystal Structure of the TTC7B/Hyccin Complex
Descriptor: Hyccin, Tetratricopeptide repeat protein 7B
Authors:Wu, X, Baskin, J.M, Reinisch, K.M, De Camilli, P.
Deposit date:2015-09-17
Release date:2015-12-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The leukodystrophy protein FAM126A (hyccin) regulates PtdIns(4)P synthesis at the plasma membrane.
Nat.Cell Biol., 18, 2016
3TPX
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BU of 3tpx by Molmil
Crystal structure of human MDM2 in complex with a trifluoromethylated D-peptide inhibitor
Descriptor: ACETATE ION, CHLORIDE ION, D-peptide inhibitor DPMI-delta, ...
Authors:Wu, X, Pazgier, M.
Deposit date:2011-09-08
Release date:2012-06-20
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:An Ultrahigh Affinity d-Peptide Antagonist Of MDM2.
J.Med.Chem., 55, 2012
1ZY6
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BU of 1zy6 by Molmil
Membrane-bound dimer structure of Protegrin-1 (PG-1), a beta-Hairpin Antimicrobial Peptide in Lipid Bilayers from Rotational-Echo Double-Resonance Solid-State NMR
Descriptor: Protegrin 1
Authors:Wu, X, Mani, R, Tang, M, Buffy, J.J, Waring, A.J, Sherman, M.A, Hong, M.
Deposit date:2005-06-09
Release date:2006-06-13
Last modified:2022-03-02
Method:SOLID-STATE NMR
Cite:Membrane-Bound Dimer Structure of a beta-Hairpin Antimicrobial Peptide from Rotational-Echo Double-Resonance Solid-State NMR.
Biochemistry, 45, 2006
3TW8
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BU of 3tw8 by Molmil
GEF domain of DENND 1B in complex with Rab GTPase Rab35
Descriptor: DENN domain-containing protein 1B, Ras-related protein Rab-35
Authors:Wu, X.D, Kummel, D, Reinisch, K.M.
Deposit date:2011-09-21
Release date:2011-11-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Insights regarding guanine nucleotide exchange from the structure of a DENN-domain protein complexed with its Rab GTPase substrate.
Proc.Natl.Acad.Sci.USA, 108, 2011
6ND1
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BU of 6nd1 by Molmil
CryoEM structure of the Sec Complex from yeast
Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ...
Authors:Wu, X, Cabanos, C, Rapoport, T.A.
Deposit date:2018-12-13
Release date:2019-01-09
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structure of the post-translational protein translocation machinery of the ER membrane.
Nature, 566, 2019
7XQE
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BU of 7xqe by Molmil
Crystal Structure of human RORgamma (C455E) LBD in complex with compound XY039
Descriptor: 2,4-difluoro-N-(1-((4-(trifluoromethyl)benzyl)sulfonyl)-1,2,3,4-tetrahydroquinolin-7-yl)benzenesulfonamide, ETHANOL, GLYCEROL, ...
Authors:Wu, X, Li, C, Zhang, Y, Xu, Y.
Deposit date:2022-05-07
Release date:2023-05-31
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Discovery and pharmacological characterization of 1,2,3,4-tetrahydroquinoline derivatives as ROR gamma inverse agonists against prostate cancer.
Acta Pharmacol.Sin., 2024
7VTV
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BU of 7vtv by Molmil
Crystal structure of PDE8A catalytic domain in complex with 15
Descriptor: 2-chloro-9-(3-(2,2-difluoroethoxy)-5-(difluoromethoxy)benzyl)-9H-purin-6-amine, High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A, MAGNESIUM ION, ...
Authors:Wu, X.-N, Zhou, Q, Huang, Y.-D, Li, Z, Wu, Y, Luo, H.-B.
Deposit date:2021-10-31
Release date:2022-11-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-Based Discovery of Orally Efficient PDE8 Inhibitors for the Treatment of Vascular Dementia
To Be Published
7VTX
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BU of 7vtx by Molmil
Crystal structure of PDE8A catalytic domain in complex with 22
Descriptor: 2-chloro-9-(3-(2,2-difluoroethoxy)-5-(pyridin-4-yl)benzyl)-9H-purin-6-amine, High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A, MAGNESIUM ION, ...
Authors:Wu, X.-N, Zhou, Q, Huang, Y.-D, Li, Z, Wu, Y, Luo, H.-B.
Deposit date:2021-10-31
Release date:2022-11-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.50010943 Å)
Cite:Structure-Based Discovery of Orally Efficient PDE8 Inhibitors for the Treatment of Vascular Dementia
To Be Published
7VSL
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BU of 7vsl by Molmil
Crystal structure of PDE8A catalytic domain in complex with 10
Descriptor: 2-chloro-9-(3-(2,2-difluoroethoxy)benzyl)-9H-purin-6-amine, High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A, MAGNESIUM ION, ...
Authors:Wu, X.-N, Zhou, Q, Huang, Y.-D, Li, Z, Wu, Y, Luo, H.-B.
Deposit date:2021-10-26
Release date:2022-11-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.500069 Å)
Cite:Structure-Based Discovery of Orally Efficient PDE8 Inhibitors for the Treatment of Vascular Dementia
To Be Published
7VTW
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BU of 7vtw by Molmil
Crystal structure of PDE8A catalytic domain in complex with 17
Descriptor: 2-chloro-9-(3-(2,2-difluoroethoxy)-5-isopropoxybenzyl)-9H-purin-6-amine, High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A, MAGNESIUM ION, ...
Authors:Wu, X.-N, Zhou, Q, Huang, Y.-D, Li, Z, Wu, Y, Luo, H.-B.
Deposit date:2021-10-31
Release date:2022-11-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.79971337 Å)
Cite:Structure-Based Discovery of Orally Efficient PDE8 Inhibitors for the Treatment of Vascular Dementia
To Be Published
3TNN
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BU of 3tnn by Molmil
Crystal structure of N5-i5 Fab, an ADCC mediating and non-neutralizing CD4i anti-HIV- 1 antibody.
Descriptor: CHLORIDE ION, Fab heavy chain of ADCC and non-neutralizing anti-HIV-1 antibody N5-i5, Fab light chain of ADCC and non-neutralizing anti-HIV-1 antibody N5-i5, ...
Authors:Wu, X, Pazgier, M.
Deposit date:2011-09-01
Release date:2012-09-26
Last modified:2021-04-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of N5-i5 Fab, an ADCC and non-neutralizing anti-HIV-1 antibody
To be Published
4JXM
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BU of 4jxm by Molmil
Crystal structure of RRP9 WD40 repeats
Descriptor: U3 small nucleolar RNA-interacting protein 2, UNKNOWN ATOM OR ION
Authors:Wu, X, Tempel, W, Xu, C, El Bakkouri, M, He, H, Seitova, A, Li, Y, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2013-03-28
Release date:2013-04-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of RRP9 WD40 repeats
To be Published
3TNM
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BU of 3tnm by Molmil
Crystal structure of A32 Fab, an ADCC mediating anti-HIV-1 antibody
Descriptor: ACETATE ION, CHLORIDE ION, Fab heavy chain of human anti-HIV-1 Env antibody A32, ...
Authors:Wu, X, Pazgier, M.
Deposit date:2011-09-01
Release date:2012-09-26
Last modified:2021-04-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Diverse specificity and effector function among human antibodies to HIV-1 envelope glycoprotein epitopes exposed by CD4 binding.
Proc.Natl.Acad.Sci.USA, 110, 2013
4N5C
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BU of 4n5c by Molmil
Crystal structure of Ypp1
Descriptor: Cargo-transport protein YPP1
Authors:Wu, X, Chi, R.J, Baskin, J.M, Lucast, L, Burd, C.G, De Camilli, P, Reinisch, K.M.
Deposit date:2013-10-09
Release date:2014-01-22
Last modified:2014-03-19
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structural insights into assembly and regulation of the plasma membrane phosphatidylinositol 4-kinase complex.
Dev.Cell, 28, 2014
4N5A
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BU of 4n5a by Molmil
Crystal structure of Efr3
Descriptor: Protein EFR3
Authors:Wu, X, Chi, R.J, Baskin, J.M, Lucast, L, Burd, C.G, De Camilli, P, Reinisch, K.M.
Deposit date:2013-10-09
Release date:2014-01-22
Last modified:2014-03-19
Method:X-RAY DIFFRACTION (3.204 Å)
Cite:Structural insights into assembly and regulation of the plasma membrane phosphatidylinositol 4-kinase complex.
Dev.Cell, 28, 2014
7DSJ
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BU of 7dsj by Molmil
Anthranilate phosphoribosyltransferase from Saccharomyces cerevisiae in complex with PRPP and Mg
Descriptor: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, Anthranilate phosphoribosyltransferase, MAGNESIUM ION
Authors:Wu, X.
Deposit date:2020-12-31
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Crystal structures of anthranilate phosphoribosyltransferase from Saccharomyces cerevisiae.
Acta Crystallogr.,Sect.F, 77, 2021
7DSM
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BU of 7dsm by Molmil
Anthranilate phosphoribosyltransferase from Saccharomyces cerevisiae
Descriptor: Anthranilate phosphoribosyltransferase
Authors:Wu, X.
Deposit date:2020-12-31
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Crystal structures of anthranilate phosphoribosyltransferase from Saccharomyces cerevisiae.
Acta Crystallogr.,Sect.F, 77, 2021
7DSO
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BU of 7dso by Molmil
Anthranilate phosphoribosyltransferase from Saccharomyces cerevisiae in complex with 4-fluoroanthranilate
Descriptor: 2-amino-4-fluorobenzoic acid, Anthranilate phosphoribosyltransferase
Authors:Wu, X.
Deposit date:2020-12-31
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Crystal structures of anthranilate phosphoribosyltransferase from Saccharomyces cerevisiae.
Acta Crystallogr.,Sect.F, 77, 2021
7DSP
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BU of 7dsp by Molmil
Anthranilate phosphoribosyltransferase variant Ser121Ala from Saccharomyces cerevisiae with Mg bound
Descriptor: Anthranilate phosphoribosyltransferase, MAGNESIUM ION
Authors:Wu, X.
Deposit date:2020-12-31
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of anthranilate phosphoribosyltransferase from Saccharomyces cerevisiae.
Acta Crystallogr.,Sect.F, 77, 2021
7DSR
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BU of 7dsr by Molmil
Anthranilate phosphoribosyltransferase variant Gly141Asn from Saccharomyces cerevisiae in complex with 4-fluoroanthranilate
Descriptor: 2-amino-4-fluorobenzoic acid, Anthranilate phosphoribosyltransferase
Authors:Wu, X.
Deposit date:2020-12-31
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of anthranilate phosphoribosyltransferase from Saccharomyces cerevisiae.
Acta Crystallogr.,Sect.F, 77, 2021
5YIU
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BU of 5yiu by Molmil
Caulobacter crescentus GcrA DNA-binding domain (DBD)
Descriptor: Cell cycle regulatory protein GcrA
Authors:Wu, X, Zhang, Y.
Deposit date:2017-10-06
Release date:2018-03-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structural insights into the unique mechanism of transcription activation by Caulobacter crescentus GcrA.
Nucleic Acids Res., 46, 2018
5YIW
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BU of 5yiw by Molmil
Caulobacter crescentus GcrA DNA-binding domain (DBD) in complex with methylated dsDNA (crystal form 2)
Descriptor: (R,R)-2,3-BUTANEDIOL, Cell cycle regulatory protein GcrA, DNA (5'-D(*CP*CP*CP*TP*GP*(6MA)P*TP*TP*CP*GP*C)-3'), ...
Authors:Wu, X, Zhang, Y.
Deposit date:2017-10-06
Release date:2018-03-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Structural insights into the unique mechanism of transcription activation by Caulobacter crescentus GcrA.
Nucleic Acids Res., 46, 2018
5YIV
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BU of 5yiv by Molmil
Caulobacter crescentus GcrA DNA-binding domain(DBD) in complex with methylated dsDNA(crystal form 1)
Descriptor: Cell cycle regulatory protein GcrA, DNA (5'-D(*CP*CP*GP*(6MA)P*AP*TP*CP*AP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*(6MA)P*TP*TP*CP*G)-3')
Authors:Wu, X, Zhang, Y.
Deposit date:2017-10-06
Release date:2018-03-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.914 Å)
Cite:Structural insights into the unique mechanism of transcription activation by Caulobacter crescentus GcrA.
Nucleic Acids Res., 46, 2018

224004

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