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PDB: 74 件
8WOH
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BU of 8woh by Molmil
human dsDNA sensor CCDC25 complexed with 18bp DNA
分子名称: 18bp DNA, Coiled-coil domain-containing protein 25
著者Wen, Y, Wu, B.X.
登録日2023-10-07
公開日2024-10-09
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献human dsDNA sensor CCDC25 complexed with 18bp DNA
To Be Published
6KZH
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BU of 6kzh by Molmil
14-3-3 protein in Complex with CIC S173 phosphorylated peptide
分子名称: 14-3-3 protein theta, CIC pS173 peptide
著者Wen, Y, Shao, Y.
登録日2019-09-24
公開日2020-09-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.645 Å)
主引用文献14-3-3 protein in Complex with CIC S173 phosphorylated peptide
To Be Published
6KYX
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BU of 6kyx by Molmil
Crystal Structure of Staphylococcus aureus response regulator ArlR DNA binding domain with His tag cleaved
分子名称: DNA-binding response regulator ArlR
著者Wen, Y, Ouyang, Z.
登録日2019-09-20
公開日2020-09-23
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.0048 Å)
主引用文献Crystal Structure of Staphylococcus aureus response regulator ArlR DNA binding domain
To Be Published
6IS2
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BU of 6is2 by Molmil
Crystal Structure of Staphylococcus aureus response regulator ArlR receiver domain in complex with Mg
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, IMIDAZOLE, MAGNESIUM ION, ...
著者Wen, Y, Ouyang, Z.
登録日2018-11-15
公開日2019-10-30
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.591 Å)
主引用文献Deciphering the activation and recognition mechanisms of Staphylococcus aureus response regulator ArlR.
Nucleic Acids Res., 47, 2019
6IS4
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BU of 6is4 by Molmil
Crystal Structure of Staphylococcus aureus response regulator ArlR DNA binding domain
分子名称: MAGNESIUM ION, Response regulator ArlR, SODIUM ION
著者Wen, Y, Ouyang, Z.
登録日2018-11-15
公開日2019-10-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.854 Å)
主引用文献Deciphering the activation and recognition mechanisms of Staphylococcus aureus response regulator ArlR.
Nucleic Acids Res., 47, 2019
6IS1
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BU of 6is1 by Molmil
Crystal Structure of Staphylococcus aureus response regulator ArlR receiver domain in complex with BeF3 and Mg
分子名称: BERYLLIUM TRIFLUORIDE ION, IMIDAZOLE, MAGNESIUM ION, ...
著者Wen, Y, Ouyang, Z.
登録日2018-11-15
公開日2019-10-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Deciphering the activation and recognition mechanisms of Staphylococcus aureus response regulator ArlR.
Nucleic Acids Res., 47, 2019
6IS3
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BU of 6is3 by Molmil
Crystal Structure of Staphylococcus aureus response regulator ArlR receiver domain
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Response regulator ArlR
著者Wen, Y, Ouyang, Z.
登録日2018-11-15
公開日2019-10-30
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.549 Å)
主引用文献Deciphering the activation and recognition mechanisms of Staphylococcus aureus response regulator ArlR.
Nucleic Acids Res., 47, 2019
7YW0
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BU of 7yw0 by Molmil
Bacteroides fragilis Hcp5
分子名称: Bacterodales T6SS protein TssD (Hcp)
著者Wen, Y, He, W, Bai, Y.
登録日2022-08-20
公開日2023-08-30
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structure and assembly of type VI secretion system cargo delivery vehicle.
Cell Rep, 42, 2023
6LNP
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BU of 6lnp by Molmil
Crystal structure of citrate Biosensor
分子名称: CITRIC ACID, Fusion protein of Green fluorescent protein and Sensor histidine kinase CitA
著者Wen, Y, Campbell, R.
登録日2019-12-31
公開日2020-05-06
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.993 Å)
主引用文献High-Performance Intensiometric Direct- and Inverse-Response Genetically Encoded Biosensors for Citrate.
Acs Cent.Sci., 6, 2020
2MUU
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BU of 2muu by Molmil
The Proteolytic Activity of Ubiquitin-specific Protease 28 Is Modulated by the N-terminal Domain
分子名称: Ubiquitin carboxyl-terminal hydrolase 28
著者Wen, Y, Shi, L, Zhang, N.
登録日2014-09-17
公開日2016-04-20
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The N-terminal ubiquitin-binding region of ubiquitin-specific protease 28 modulates its deubiquitination function: NMR structural and mechanistic insights.
Biochem.J., 471, 2015
7YV3
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BU of 7yv3 by Molmil
genetically encoded pH sensor Lime at pH10
分子名称: Lime
著者Wen, Y, Shen, Y, Campbell, R, Lemieux, M.J.
登録日2022-08-18
公開日2023-08-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Rational Engineering of an Improved Genetically Encoded pH Sensor Based on Superecliptic pHluorin.
ACS Sens, 8, 2023
7YV5
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genetically encoded pH sensor Lime at pH6
分子名称: Lime
著者Wen, Y, Shen, Y, Campbell, R, Lemieux, M.J.
登録日2022-08-18
公開日2023-08-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Rational Engineering of an Improved Genetically Encoded pH Sensor Based on Superecliptic pHluorin.
ACS Sens, 8, 2023
5IML
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BU of 5iml by Molmil
Nanobody targeting human Vsig4 in Spacegroup P212121
分子名称: Nanobody, V-set and immunoglobulin domain-containing protein 4
著者Wen, Y.
登録日2016-03-06
公開日2017-01-11
最終更新日2017-07-05
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural evaluation of a nanobody targeting complement receptor Vsig4 and its cross reactivity
Immunobiology, 222, 2017
8Z79
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BU of 8z79 by Molmil
Crystal structure of 5-N-alpha-glycinylthymidine (N-alpha-GlyT) FAD-dependent lyase gp47/NGTO from Pseudomonas phage PaMx11 in complex with dsDNA
分子名称: DNA (5'-D(*TP*AP*GP*TP*CP*AP*TP*GP*AP*CP*T)-3'), FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent lyase
著者Wen, Y, Guo, W.T, Wu, B.X.
登録日2024-04-19
公開日2024-10-02
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural insights into the biosynthetic mechanism of N alpha-GlyT and 5-NmdU hypermodifications of DNA.
Nucleic Acids Res., 2024
8Z2N
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BU of 8z2n by Molmil
Crystal structure of 5-phosphomethyl-2'-deoxyuridine (5-PmdU) glycinyltransferase gp46/PUGT from Pseudomonads phage PaMx11 in complex with dsDNA
分子名称: CALCIUM ION, DNA (5'-D(*TP*AP*GP*TP*CP*GP*AP*CP*GP*AP*CP*TP*A)-3'), DNA (5'-D(*TP*AP*GP*TP*CP*GP*TP*CP*GP*AP*CP*TP*A)-3'), ...
著者Wen, Y, Guo, W.T, Wu, B.X.
登録日2024-04-13
公開日2024-10-02
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insights into the biosynthetic mechanism of N alpha-GlyT and 5-NmdU hypermodifications of DNA.
Nucleic Acids Res., 2024
8Z2M
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BU of 8z2m by Molmil
Crystal structure of 5-phosphomethyl-2'-deoxyuridine (5-PmdU) glycinyltransferase gp46/PUGT from Pseudomonads phage PaMx11
分子名称: Glycinyltransferase, SULFATE ION
著者Wen, Y, Guo, W.T, Wu, B.X.
登録日2024-04-13
公開日2024-10-02
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into the biosynthetic mechanism of N alpha-GlyT and 5-NmdU hypermodifications of DNA.
Nucleic Acids Res., 2024
8Z2O
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BU of 8z2o by Molmil
Crystal structure of 5-N-alpha-glycinylthymidine (N-alpha-GlyT) FAD-dependent lyase gp47/NGTO from Pseudomonads phage PaMx11
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent lyase, ...
著者Wen, Y, Guo, W.T, Wu, B.X.
登録日2024-04-13
公開日2024-10-02
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insights into the biosynthetic mechanism of N alpha-GlyT and 5-NmdU hypermodifications of DNA.
Nucleic Acids Res., 2024
4PU3
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BU of 4pu3 by Molmil
Shewanella oneidensis MR-1 Toxin Antitoxin System HipA, HipB and its operator DNA complex (space group P212121)
分子名称: Operator DNA, Toxin-antitoxin system antidote transcriptional repressor Xre family, Toxin-antitoxin system toxin HipA family
著者Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S.
登録日2014-03-12
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.39 Å)
主引用文献The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence.
Nucleic Acids Res., 42, 2014
4PU8
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BU of 4pu8 by Molmil
Shewanella oneidensis Toxin Antitoxin System Antitoxin Protein HipB Resolution 2.35
分子名称: Toxin-antitoxin system antidote transcriptional repressor Xre family
著者Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S.
登録日2014-03-12
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence.
Nucleic Acids Res., 42, 2014
4PU5
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BU of 4pu5 by Molmil
Shewanella oneidensis Toxin Antitoxin System Toxin Protein HipA Bound with AMPPNP and Mg
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SODIUM ION, ...
著者Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S.
登録日2014-03-12
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.834 Å)
主引用文献The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence.
Nucleic Acids Res., 42, 2014
4PU4
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BU of 4pu4 by Molmil
Shewanella oneidensis MR-1 Toxin Antitoxin System HipA, HipB and its operator DNA complex (space group P21)
分子名称: Operator DNA, Toxin-antitoxin system antidote transcriptional repressor Xre family, Toxin-antitoxin system toxin HipA family
著者Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S.
登録日2014-03-12
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.786 Å)
主引用文献The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence.
Nucleic Acids Res., 42, 2014
4PU7
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Shewanella oneidensis Toxin Antitoxin System Antitoxin Protein HipB Resolution 1.85
分子名称: Toxin-antitoxin system antidote transcriptional repressor Xre family
著者Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S.
登録日2014-03-12
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence.
Nucleic Acids Res., 42, 2014
5IMM
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BU of 5imm by Molmil
Nanobody targeting mouse Vsig4 in Spacegroup P212121
分子名称: Nanobody, Protein Vsig4
著者Wen, Y, Zheng, F.
登録日2016-03-06
公開日2017-01-11
最終更新日2017-07-05
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural evaluation of a nanobody targeting complement receptor Vsig4 and its cross reactivity
Immunobiology, 222, 2017
5IMK
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BU of 5imk by Molmil
Nanobody targeting human Vsig4 in Spacegroup C2
分子名称: Nanobody, V-set and immunoglobulin domain-containing protein 4
著者Wen, Y.
登録日2016-03-06
公開日2017-01-11
最終更新日2017-07-05
実験手法X-RAY DIFFRACTION (1.227 Å)
主引用文献Structural evaluation of a nanobody targeting complement receptor Vsig4 and its cross reactivity
Immunobiology, 222, 2017
5IMO
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BU of 5imo by Molmil
Nanobody targeting mouse Vsig4 in Spacegroup P3221
分子名称: Nanobody, Protein Vsig4
著者Wen, Y, Zheng, F.
登録日2016-03-06
公開日2017-01-11
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural evaluation of a nanobody targeting complement receptor Vsig4 and its cross reactivity
Immunobiology, 222, 2017

 

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