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PDB: 80 results

6LNP
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BU of 6lnp by Molmil
Crystal structure of citrate Biosensor
Descriptor: CITRIC ACID, Fusion protein of Green fluorescent protein and Sensor histidine kinase CitA
Authors:Wen, Y, Campbell, R.
Deposit date:2019-12-31
Release date:2020-05-06
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.993 Å)
Cite:High-Performance Intensiometric Direct- and Inverse-Response Genetically Encoded Biosensors for Citrate.
Acs Cent.Sci., 6, 2020
6KZG
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BU of 6kzg by Molmil
14-3-3 protein in Complex with CIC S301 phosphorylated peptide
Descriptor: 14-3-3 protein theta, ARG-SER-MET-SER-GLU-THR-GLY-THR
Authors:Wen, Y, Shao, Y.
Deposit date:2019-09-24
Release date:2020-09-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:14-3-3 protein in Complex with CIC S301 phosphorylated peptide
To Be Published
4PU5
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BU of 4pu5 by Molmil
Shewanella oneidensis Toxin Antitoxin System Toxin Protein HipA Bound with AMPPNP and Mg
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SODIUM ION, ...
Authors:Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S.
Deposit date:2014-03-12
Release date:2014-08-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.834 Å)
Cite:The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence.
Nucleic Acids Res., 42, 2014
4PU4
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BU of 4pu4 by Molmil
Shewanella oneidensis MR-1 Toxin Antitoxin System HipA, HipB and its operator DNA complex (space group P21)
Descriptor: Operator DNA, Toxin-antitoxin system antidote transcriptional repressor Xre family, Toxin-antitoxin system toxin HipA family
Authors:Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S.
Deposit date:2014-03-12
Release date:2014-08-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.786 Å)
Cite:The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence.
Nucleic Acids Res., 42, 2014
4PU7
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BU of 4pu7 by Molmil
Shewanella oneidensis Toxin Antitoxin System Antitoxin Protein HipB Resolution 1.85
Descriptor: Toxin-antitoxin system antidote transcriptional repressor Xre family
Authors:Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S.
Deposit date:2014-03-12
Release date:2014-08-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence.
Nucleic Acids Res., 42, 2014
4PU8
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BU of 4pu8 by Molmil
Shewanella oneidensis Toxin Antitoxin System Antitoxin Protein HipB Resolution 2.35
Descriptor: Toxin-antitoxin system antidote transcriptional repressor Xre family
Authors:Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S.
Deposit date:2014-03-12
Release date:2014-08-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence.
Nucleic Acids Res., 42, 2014
4PU3
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BU of 4pu3 by Molmil
Shewanella oneidensis MR-1 Toxin Antitoxin System HipA, HipB and its operator DNA complex (space group P212121)
Descriptor: Operator DNA, Toxin-antitoxin system antidote transcriptional repressor Xre family, Toxin-antitoxin system toxin HipA family
Authors:Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S.
Deposit date:2014-03-12
Release date:2014-08-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.39 Å)
Cite:The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence.
Nucleic Acids Res., 42, 2014
8GPP
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BU of 8gpp by Molmil
Acinetobacter baumannii carbonic anhydrase PaaY
Descriptor: BICARBONATE ION, CALCIUM ION, Carbonic anhydrase, ...
Authors:Wen, Y, Jiao, M.
Deposit date:2022-08-26
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Acinetobacter baumannii carbonic anhydrase
Structure, 2023
5IML
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BU of 5iml by Molmil
Nanobody targeting human Vsig4 in Spacegroup P212121
Descriptor: Nanobody, V-set and immunoglobulin domain-containing protein 4
Authors:Wen, Y.
Deposit date:2016-03-06
Release date:2017-01-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural evaluation of a nanobody targeting complement receptor Vsig4 and its cross reactivity
Immunobiology, 222, 2017
5IMK
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BU of 5imk by Molmil
Nanobody targeting human Vsig4 in Spacegroup C2
Descriptor: Nanobody, V-set and immunoglobulin domain-containing protein 4
Authors:Wen, Y.
Deposit date:2016-03-06
Release date:2017-01-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.227 Å)
Cite:Structural evaluation of a nanobody targeting complement receptor Vsig4 and its cross reactivity
Immunobiology, 222, 2017
5IMO
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BU of 5imo by Molmil
Nanobody targeting mouse Vsig4 in Spacegroup P3221
Descriptor: Nanobody, Protein Vsig4
Authors:Wen, Y, Zheng, F.
Deposit date:2016-03-06
Release date:2017-01-11
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural evaluation of a nanobody targeting complement receptor Vsig4 and its cross reactivity
Immunobiology, 222, 2017
5IMM
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BU of 5imm by Molmil
Nanobody targeting mouse Vsig4 in Spacegroup P212121
Descriptor: Nanobody, Protein Vsig4
Authors:Wen, Y, Zheng, F.
Deposit date:2016-03-06
Release date:2017-01-11
Last modified:2017-07-05
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural evaluation of a nanobody targeting complement receptor Vsig4 and its cross reactivity
Immunobiology, 222, 2017
8Z79
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BU of 8z79 by Molmil
Crystal structure of 5-N-alpha-glycinylthymidine (N-alpha-GlyT) FAD-dependent lyase gp47/NGTO from Pseudomonas phage PaMx11 in complex with dsDNA
Descriptor: DNA (5'-D(*TP*AP*GP*TP*CP*AP*TP*GP*AP*CP*T)-3'), FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent lyase
Authors:Wen, Y, Guo, W.T, Wu, B.X.
Deposit date:2024-04-19
Release date:2024-10-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural insights into the biosynthetic mechanism of N alpha-GlyT and 5-NmdU hypermodifications of DNA.
Nucleic Acids Res., 52, 2024
6IS4
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BU of 6is4 by Molmil
Crystal Structure of Staphylococcus aureus response regulator ArlR DNA binding domain
Descriptor: MAGNESIUM ION, Response regulator ArlR, SODIUM ION
Authors:Wen, Y, Ouyang, Z.
Deposit date:2018-11-15
Release date:2019-10-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.854 Å)
Cite:Deciphering the activation and recognition mechanisms of Staphylococcus aureus response regulator ArlR.
Nucleic Acids Res., 47, 2019
8GPM
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BU of 8gpm by Molmil
Acinetobacter baumannii carbonic anhydrase
Descriptor: CALCIUM ION, Carbonic anhydrase, GLYCEROL, ...
Authors:Wen, Y, Jiao, M.
Deposit date:2022-08-26
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Acinetobacter baumannii carbonic anhydrase
Structure, 2023
6IS2
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BU of 6is2 by Molmil
Crystal Structure of Staphylococcus aureus response regulator ArlR receiver domain in complex with Mg
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, IMIDAZOLE, MAGNESIUM ION, ...
Authors:Wen, Y, Ouyang, Z.
Deposit date:2018-11-15
Release date:2019-10-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.591 Å)
Cite:Deciphering the activation and recognition mechanisms of Staphylococcus aureus response regulator ArlR.
Nucleic Acids Res., 47, 2019
6IS3
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BU of 6is3 by Molmil
Crystal Structure of Staphylococcus aureus response regulator ArlR receiver domain
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Response regulator ArlR
Authors:Wen, Y, Ouyang, Z.
Deposit date:2018-11-15
Release date:2019-10-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.549 Å)
Cite:Deciphering the activation and recognition mechanisms of Staphylococcus aureus response regulator ArlR.
Nucleic Acids Res., 47, 2019
8Z2N
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BU of 8z2n by Molmil
Crystal structure of 5-phosphomethyl-2'-deoxyuridine (5-PmdU) glycinyltransferase gp46/PUGT from Pseudomonads phage PaMx11 in complex with dsDNA
Descriptor: CALCIUM ION, DNA (5'-D(*TP*AP*GP*TP*CP*GP*AP*CP*GP*AP*CP*TP*A)-3'), DNA (5'-D(*TP*AP*GP*TP*CP*GP*TP*CP*GP*AP*CP*TP*A)-3'), ...
Authors:Wen, Y, Guo, W.T, Wu, B.X.
Deposit date:2024-04-13
Release date:2024-10-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the biosynthetic mechanism of N alpha-GlyT and 5-NmdU hypermodifications of DNA.
Nucleic Acids Res., 52, 2024
6IS1
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BU of 6is1 by Molmil
Crystal Structure of Staphylococcus aureus response regulator ArlR receiver domain in complex with BeF3 and Mg
Descriptor: BERYLLIUM TRIFLUORIDE ION, IMIDAZOLE, MAGNESIUM ION, ...
Authors:Wen, Y, Ouyang, Z.
Deposit date:2018-11-15
Release date:2019-10-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Deciphering the activation and recognition mechanisms of Staphylococcus aureus response regulator ArlR.
Nucleic Acids Res., 47, 2019
7YV3
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BU of 7yv3 by Molmil
genetically encoded pH sensor Lime at pH10
Descriptor: Lime
Authors:Wen, Y, Shen, Y, Campbell, R, Lemieux, M.J.
Deposit date:2022-08-18
Release date:2023-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rational Engineering of an Improved Genetically Encoded pH Sensor Based on Superecliptic pHluorin.
ACS Sens, 8, 2023
7YV5
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BU of 7yv5 by Molmil
genetically encoded pH sensor Lime at pH6
Descriptor: Lime
Authors:Wen, Y, Shen, Y, Campbell, R, Lemieux, M.J.
Deposit date:2022-08-18
Release date:2023-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Rational Engineering of an Improved Genetically Encoded pH Sensor Based on Superecliptic pHluorin.
ACS Sens, 8, 2023
8H3Y
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BU of 8h3y by Molmil
Bacteroide Fragilis Toxin in complex with nanobody 327
Descriptor: Fragilysin, Nanobody 327, ZINC ION
Authors:Wen, Y, Guo, Y.
Deposit date:2022-10-09
Release date:2023-02-08
Last modified:2023-03-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Screening and epitope characterization of diagnostic nanobody against total and activated Bacteroides fragilis toxin.
Front Immunol, 14, 2023
8Z2O
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BU of 8z2o by Molmil
Crystal structure of 5-N-alpha-glycinylthymidine (N-alpha-GlyT) FAD-dependent lyase gp47/NGTO from Pseudomonads phage PaMx11
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent lyase, ...
Authors:Wen, Y, Guo, W.T, Wu, B.X.
Deposit date:2024-04-13
Release date:2024-10-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the biosynthetic mechanism of N alpha-GlyT and 5-NmdU hypermodifications of DNA.
Nucleic Acids Res., 52, 2024
8Z2M
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BU of 8z2m by Molmil
Crystal structure of 5-phosphomethyl-2'-deoxyuridine (5-PmdU) glycinyltransferase gp46/PUGT from Pseudomonads phage PaMx11
Descriptor: Glycinyltransferase, SULFATE ION
Authors:Wen, Y, Guo, W.T, Wu, B.X.
Deposit date:2024-04-13
Release date:2024-10-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into the biosynthetic mechanism of N alpha-GlyT and 5-NmdU hypermodifications of DNA.
Nucleic Acids Res., 52, 2024
8GRA
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BU of 8gra by Molmil
Structure of Type VI secretion system cargo delivery vehicle Hcp-VgrG-PAAR
Descriptor: Bacterodales T6SS protein TssD (Hcp), Type VI secretion system spike protein Paar, Type VI secretion system spike protein VgrG
Authors:Wen, Y, He, W, Zhu, L.
Deposit date:2022-09-01
Release date:2023-07-12
Last modified:2023-08-30
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure and assembly of type VI secretion system cargo delivery vehicle.
Cell Rep, 42, 2023

 

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數據於2024-10-30公開中

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