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PDB: 255 results

6VFJ
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BU of 6vfj by Molmil
De novo designed icosahedral nanoparticle I53_dn5
Descriptor: I53_dn5A, I53_dn5B
Authors:Antanasijevic, A, Ward, A.B.
Deposit date:2020-01-05
Release date:2020-08-12
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (5.35 Å)
Cite:Tailored design of protein nanoparticle scaffolds for multivalent presentation of viral glycoprotein antigens.
Elife, 9, 2020
6VFH
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BU of 6vfh by Molmil
De novo designed tetrahedral nanoparticle T33_dn10
Descriptor: T33_dn10A, T33_dn10B
Authors:Antanasijevic, A, Ward, A.B.
Deposit date:2020-01-05
Release date:2020-08-12
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.86 Å)
Cite:Tailored design of protein nanoparticle scaffolds for multivalent presentation of viral glycoprotein antigens.
Elife, 9, 2020
6VFK
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BU of 6vfk by Molmil
De novo designed tetrahedral nanoparticle T33_dn10 displaying 4 copies of BG505-SOSIP trimer on the surface
Descriptor: BG505-SOSIP-T33_dn10A, T33_dn10B
Authors:Antanasijevic, A, Ward, A.B.
Deposit date:2020-01-05
Release date:2020-07-22
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.25 Å)
Cite:Structural and functional evaluation of de novo-designed, two-component nanoparticle carriers for HIV Env trimer immunogens.
Plos Pathog., 16, 2020
6V0R
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BU of 6v0r by Molmil
BG505 SOSIP.664 Trimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Nogal, B, Cottrell, C.A, Ward, A.B.
Deposit date:2019-11-19
Release date:2020-04-01
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Mapping Polyclonal Antibody Responses in Non-human Primates Vaccinated with HIV Env Trimer Subunit Vaccines.
Cell Rep, 30, 2020
6VFI
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BU of 6vfi by Molmil
De novo designed octahedral nanoparticle O43_dn18
Descriptor: O43_dn18A, O43_dn18B
Authors:Antanasijevic, A, Ward, A.B.
Deposit date:2020-01-05
Release date:2020-08-12
Last modified:2020-08-19
Method:ELECTRON MICROSCOPY (4.54 Å)
Cite:Tailored design of protein nanoparticle scaffolds for multivalent presentation of viral glycoprotein antigens.
Elife, 9, 2020
6VFL
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BU of 6vfl by Molmil
BG505-SOSIP model reconstructed by subparticle extraction and refinement from a tetrahedral nanoparticle T33_dn10
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505-SOSIPv5.2(7S) - gp120, ...
Authors:Antanasijevic, A, Ward, A.B.
Deposit date:2020-01-05
Release date:2020-07-22
Last modified:2020-08-26
Method:ELECTRON MICROSCOPY (4.14 Å)
Cite:Structural and functional evaluation of de novo-designed, two-component nanoparticle carriers for HIV Env trimer immunogens.
Plos Pathog., 16, 2020
8SW4
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BU of 8sw4 by Molmil
BG505 GT1.1 SOSIP in complex with NHP Fabs 21N13, 21M20 and RM20A3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 21M20 heavy chain variable region, ...
Authors:Ozorowski, G, Torres, J.L, Zhang, S, Ward, A.B.
Deposit date:2023-05-17
Release date:2024-05-29
Last modified:2024-09-11
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Germline-targeting HIV vaccination induces neutralizing antibodies to the CD4 binding site.
Sci Immunol, 9, 2024
8SW3
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BU of 8sw3 by Molmil
BG505 GT1.1 SOSIP in complex with NHP Fabs 12C11 and RM20A3
Descriptor: 12C11 heavy chain variable region, 12C11 light chain variable region, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, S, Torres, J.L, Ozorowski, G, Ward, A.B.
Deposit date:2023-05-17
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Germline-targeting HIV vaccination induces neutralizing antibodies to the CD4 binding site.
Sci Immunol, 9, 2024
8TP6
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BU of 8tp6 by Molmil
H2 hemagglutinin (A/Singapore/1/1957) in complex with RBS-targeting Fab 4-1-1E02
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of 4-1-1E02 Fab, ...
Authors:Yang, Y.R, Han, J, Perrett, H.R, Ward, A.B.
Deposit date:2023-08-04
Release date:2023-10-11
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Immune memory shapes human polyclonal antibody responses to H2N2 vaccination.
Biorxiv, 2023
8TP7
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BU of 8tp7 by Molmil
H2 hemagglutinin (A/Singapore/1/1957) in complex with Sa-targeting Fab 4-1-1G03
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of monoclonal antibody 4-1-1G03, ...
Authors:Yang, Y.R, Han, J, Perrett, H.R, Ward, A.B.
Deposit date:2023-08-04
Release date:2023-10-11
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Immune memory shapes human polyclonal antibody responses to H2N2 vaccination.
Biorxiv, 2023
8TP9
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BU of 8tp9 by Molmil
H2 hemagglutinin (A/Singapore/1/1957) in complex with medial-junction-targeting Fab 2-2-1G06
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of Fab 2-2-1G06, ...
Authors:Yang, Y.R, Han, J, Perrett, H.R, Ward, A.B.
Deposit date:2023-08-04
Release date:2023-10-11
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Immune memory shapes human polyclonal antibody responses to H2N2 vaccination.
Biorxiv, 2023
8TP3
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BU of 8tp3 by Molmil
H1 hemagglutinin (NC99) in complex with RBS-targeting Fab 1-1-1F05
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of Fab 1-1-1F05, ...
Authors:Yang, Y.R, Han, J, Perrett, H.R, Ward, A.B.
Deposit date:2023-08-04
Release date:2023-10-11
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Immune memory shapes human polyclonal antibody responses to H2N2 vaccination.
Biorxiv, 2023
8TPA
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BU of 8tpa by Molmil
H1 hemagglutinin (NC99) in complex with medial-junction-targeting Fab 2-2-1G06
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of Fab 2-2-1G06, ...
Authors:Yang, Y.R, Han, J, Perrett, H.R, Ward, A.B.
Deposit date:2023-08-04
Release date:2023-10-11
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Immune memory shapes human polyclonal antibody responses to H2N2 vaccination.
Biorxiv, 2023
8TP4
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BU of 8tp4 by Molmil
H2 hemagglutinin (A/Singapore/1/1957) in complex with RBS-targeting Fab 1-1-1E04
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of Fab 1-1-1E04, ...
Authors:Yang, Y.R, Han, J, Perrett, H.R, Ward, A.B.
Deposit date:2023-08-04
Release date:2023-10-11
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Immune memory shapes human polyclonal antibody responses to H2N2 vaccination.
Biorxiv, 2023
8TP2
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BU of 8tp2 by Molmil
H2 hemagglutinin (A/Singapore/1/1957) in complex with RBS-targeting 1-1-1F05
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of Fab 1-1-1F05, ...
Authors:Yang, Y.R, Han, J, Perrett, H.R, Ward, A.B.
Deposit date:2023-08-04
Release date:2023-10-11
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Immune memory shapes human polyclonal antibody responses to H2N2 vaccination.
Biorxiv, 2023
8TP5
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BU of 8tp5 by Molmil
H1 hemagglutinin (NC99) in complex with RBS-targeting Fab 1-1-1E04
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of Fab 1-1-1E04, ...
Authors:Yang, Y.R, Han, J, Perrett, H.R, Ward, A.B.
Deposit date:2023-08-04
Release date:2023-10-11
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Immune memory shapes human polyclonal antibody responses to H2N2 vaccination.
Biorxiv, 2023
7JJI
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BU of 7jji by Molmil
Structure of SARS-CoV-2 3Q-2P full-length prefusion spike trimer (C3 symmetry)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-hydroxyethyl 2-deoxy-3,5-bis-O-(2-hydroxyethyl)-6-O-(2-{[(9E)-octadec-9-enoyl]oxy}ethyl)-alpha-L-xylo-hexofuranoside, ...
Authors:Bangaru, S, Turner, H.L, Ozorowski, G, Antanasijevic, A, Ward, A.B.
Deposit date:2020-07-26
Release date:2020-08-26
Last modified:2020-12-23
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural analysis of full-length SARS-CoV-2 spike protein from an advanced vaccine candidate.
Science, 370, 2020
7JJJ
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BU of 7jjj by Molmil
Structure of SARS-CoV-2 3Q-2P full-length dimers of spike trimers
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Bangaru, S, Turner, H.L, Ozorowski, G, Antanasijevic, A, Ward, A.B.
Deposit date:2020-07-26
Release date:2020-08-26
Last modified:2020-12-23
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural analysis of full-length SARS-CoV-2 spike protein from an advanced vaccine candidate.
Science, 370, 2020
8T4D
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BU of 8t4d by Molmil
MD65 N332-GT5 SOSIP in complex with RM_N332_08 Fab and RM20A3 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MD65 N332-GT5 SOSIP gp120, ...
Authors:Ozorowski, G, Torres, J.L, Ward, A.B.
Deposit date:2023-06-09
Release date:2024-05-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Vaccine priming of rare HIV broadly neutralizing antibody precursors in nonhuman primates.
Science, 384, 2024
8T49
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BU of 8t49 by Molmil
MD65 N332-GT5 SOSIP in complex with RM_N332_03 Fab and RM20A3 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MD65 N332-GT5 SOSIP gp120, ...
Authors:Ozorowski, G, Torres, J.L, Ward, A.B.
Deposit date:2023-06-08
Release date:2024-05-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Vaccine priming of rare HIV broadly neutralizing antibody precursors in nonhuman primates.
Science, 384, 2024
8SWW
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BU of 8sww by Molmil
BG505 Boost2 SOSIP.664 in complex with NHP polyclonal antibody IF3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NHP polyclonal antibody IF3 Heavy Chain, ...
Authors:Pratap, P.P, Antansijevic, A, Ward, A.B.
Deposit date:2023-05-19
Release date:2024-05-22
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Priming antibody responses to the fusion peptide in rhesus macaques.
Npj Vaccines, 9, 2024
8SX3
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BU of 8sx3 by Molmil
10E8-GT10.2 immunogen in complex with human Fab 10E8 and mouse Fab W6-10
Descriptor: 10E8 Fab heavy chain, 10E8 light chain, 10E8-GT10.2 immunogen, ...
Authors:Huang, J, Ozorowski, G, Ward, A.B.
Deposit date:2023-05-19
Release date:2024-05-22
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Vaccination induces broadly neutralizing antibody precursors to HIV gp41.
Nat.Immunol., 25, 2024
8T4B
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BU of 8t4b by Molmil
MD65 N332-GT5 SOSIP in complex with RM_N332_32 Fab and RM20A3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MD65 N332-GT5 SOSIP gp120, MD65 N332-GT5 SOSIP gp41, ...
Authors:Ozorowski, G, Torres, J.L, Ward, A.B.
Deposit date:2023-06-08
Release date:2024-05-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Vaccine priming of rare HIV broadly neutralizing antibody precursors in nonhuman primates.
Science, 384, 2024
8T4K
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BU of 8t4k by Molmil
MD64 N332-GT5 SOSIP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MD64 N332-GT5 SOSIP gp120, ...
Authors:Ozorowski, G, Torres, J.L, Ward, A.B.
Deposit date:2023-06-09
Release date:2024-05-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Vaccine priming of rare HIV broadly neutralizing antibody precursors in nonhuman primates.
Science, 384, 2024
8T4A
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BU of 8t4a by Molmil
MD65 N332-GT5 SOSIP in complex with RM_N332_36 Fab and RM20A3 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MD65 N332-GT5 SOSIP gp120, ...
Authors:Ozorowski, G, Torres, J.L, Ward, A.B.
Deposit date:2023-06-08
Release date:2024-05-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Vaccine priming of rare HIV broadly neutralizing antibody precursors in nonhuman primates.
Science, 384, 2024

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