PDB Search results for query - Protein Data Bank Japan

PDB: 55 results

Crystal structure of 3-dehydroquinate synthase (DHQS)from Helicobacter pylori
Descriptor:	3-dehydroquinate synthase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:	Wang, W.C, Liu, J.S, Cheng, W.C, Wang, H.J, Chen, Y.C.
Deposit date:	2008-03-19
Release date:	2009-03-24
Last modified:	2023-11-01
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Structure-based inhibitor discovery of Helicobacter pylori dehydroquinate synthase. Biochem.Biophys.Res.Commun., 373, 2008

2GGK

The mutant A302C of Agrobacterium radiobacter N-carbamoyl-D-amino-acid amidohydrolase
Descriptor:	N-carbamoyl-D-amino acid amidohydrolase
Authors:	Wang, W.C, Chiu, W.C, You, J.Y.
Deposit date:	2006-03-24
Release date:	2006-04-11
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Structure-Stability-Activity Relationship in Covalently Cross-linked N-Carbamoyl d-Amino acid Amidohydrolase and N-Acylamino acid Racemase. J.Mol.Biol., 359, 2006

2GGJ

The mutant Y218C of Deinococcus Radiodurans N-acylamino acid racemase
Descriptor:	N-acylamino acid racemase
Authors:	Wang, W.C, Chiu, W.C.
Deposit date:	2006-03-24
Release date:	2006-04-11
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Structure-Stability-Activity Relationship in Covalently Cross-linked N-Carbamoyl d-Amino acid Amidohydrolase and N-Acylamino acid Racemase. J.Mol.Biol., 359, 2006

2GGL

The mutant A222C of Agrobacterium radiobacter N-carbamoyl-D-amino acid amidohydrolase
Descriptor:	N-carbamoyl-D-amino acid amidohydrolase
Authors:	Wang, W.C, Chiu, W.C, You, J.Y.
Deposit date:	2006-03-24
Release date:	2006-04-11
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Structure-Stability-Activity Relationship in Covalently Cross-linked N-Carbamoyl d-Amino acid Amidohydrolase and N-Acylamino acid Racemase. J.Mol.Biol., 359, 2006

4H0U

Crystal structure of thymidylate synthase from Corynebacterium glutamicum in complex with dUMP
Descriptor:	2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Thymidylate synthase
Authors:	Wang, W.C, Chang, C.M.
Deposit date:	2012-09-10
Release date:	2013-09-11
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (2.75 Å)
Cite:	Crystal structure of thymidylate synthase from Corynebacterium glutamicum in complex with dUMP TO BE PUBLISHED

2FKP

The mutant G127C-T313C of Deinococcus Radiodurans N-acylamino acid racemase
Descriptor:	N-acylamino acid racemase
Authors:	Wang, W.C, Chiu, W.C.
Deposit date:	2006-01-05
Release date:	2006-01-24
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Enhanced thermoactivity in covalently cross-linked N-carbamoyl D-amino acid amidohydrolase but not in N-acylamino acid racemase that has induced fit movements upon substrate binding To be Published

2GGI

The mutant E149C-A182C of Deinococcus Radiodurans N-acylamino acid racemase
Descriptor:	N-acylamino acid racemase
Authors:	Wang, W.C, Chiu, W.C.
Deposit date:	2006-03-24
Release date:	2006-04-11
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Structure-Stability-Activity Relationship in Covalently Cross-linked N-Carbamoyl d-Amino acid Amidohydrolase and N-Acylamino acid Racemase. J.Mol.Biol., 359, 2006

2GGH

The mutant A68C-D72C-NLQ of Deinococcus Radiodurans Nacylamino acid racemase
Descriptor:	MAGNESIUM ION, N-acylamino acid racemase, N~2~-ACETYL-L-GLUTAMINE
Authors:	Wang, W.C, Chiu, W.C.
Deposit date:	2006-03-24
Release date:	2006-04-11
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Structure-Stability-Activity Relationship in Covalently Cross-linked N-Carbamoyl d-Amino acid Amidohydrolase and N-Acylamino acid Racemase. J.Mol.Biol., 359, 2006

2GGG

The mutant A68C-D72C of Deinococcus Radiodurans N-acylamino acid racemase
Descriptor:	N-acylamino acid racemase
Authors:	Wang, W.C, Chiu, W.C.
Deposit date:	2006-03-24
Release date:	2006-04-11
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Structure-Stability-Activity Relationship in Covalently Cross-linked N-Carbamoyl d-Amino acid Amidohydrolase and N-Acylamino acid Racemase. J.Mol.Biol., 359, 2006

5X0I

Crystal structure of PKM2 R399E mutant complexed with FBP and serine
Descriptor:	1,6-di-O-phosphono-beta-D-fructofuranose, MAGNESIUM ION, POTASSIUM ION, ...
Authors:	Wang, W.C, Chen, T.J.
Deposit date:	2017-01-20
Release date:	2018-01-31
Last modified:	2023-11-22
Method:	X-RAY DIFFRACTION (2.64 Å)
Cite:	Mutations in the PKM2 exon-10 region are associated with reduced allostery and increased nuclear translocation. Commun Biol, 2, 2019

4DYJ

Crystal structure of a broad specificity amino acid racemase (Bar) within internal aldimine linkage
Descriptor:	GLYCEROL, SULFATE ION, broad specificity amino acid racemase
Authors:	Wang, W.C, Wu, H.M.
Deposit date:	2012-02-29
Release date:	2013-03-06
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (2.45 Å)
Cite:	Crystal structures of lysine-preferred racemases, the non-antibiotic selectable markers for transgenic plants Plos One, 7, 2012

4DZA

Crystal structure of a lysine racemase within internal aldimine linkage
Descriptor:	lysine racemase
Authors:	Wang, W.C, Wu, H.M.
Deposit date:	2012-03-01
Release date:	2013-03-06
Last modified:	2023-12-06
Method:	X-RAY DIFFRACTION (1.74 Å)
Cite:	Crystal structures of lysine-preferred racemases, the non-antibiotic selectable markers for transgenic plants Plos One, 7, 2012

4FS9

Complex structure of a broad specificity amino acid racemase (Bar) within the reactive intermediate
Descriptor:	Broad specificity amino acid racemase, N~2~-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-L-LYSINE
Authors:	Wang, W.C, Wu, H.M.
Deposit date:	2012-06-27
Release date:	2013-03-06
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (3.1 Å)
Cite:	Crystal structures of lysine-preferred racemases, the non-antibiotic selectable markers for transgenic plants Plos One, 7, 2012

2DYV

Helicobacter pylori formamidase AmiF contains a fine-tuned cysteine-glutamate-lysine catalytic triad
Descriptor:	Formamidase
Authors:	Wang, W.C, Hung, C.L.
Deposit date:	2006-09-18
Release date:	2007-02-13
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Crystal structure of Helicobacter pylori formamidase AmiF reveals a cysteine-glutamate-lysine catalytic triad J.Biol.Chem., 282, 2007

2GZ6

Crystal Structure Of Anabaena sp. CH1 N-acetyl-D-glucosamine 2-epimerase At 2.0 A
Descriptor:	N-acetyl-D-glucosamine 2-epimerase
Authors:	Wang, W.C, Wu, H.M, Chang, Y.N.
Deposit date:	2006-05-11
Release date:	2007-02-27
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	The Central Cavity from the (Alpha/Alpha)(6) Barrel Structure of Anabaena sp. CH1 N-Acetyl-d-glucosamine 2-Epimerase Contains Two Key Histidine Residues for Reversible Conversion. J.Mol.Biol., 367, 2007

2DYU

Helicobacter pylori formamidase AmiF contains a fine-tuned cysteine-glutamate-lysine catalytic triad
Descriptor:	Formamidase
Authors:	Wang, W.C, Hung, C.L.
Deposit date:	2006-09-18
Release date:	2007-02-13
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (1.75 Å)
Cite:	Crystal structure of Helicobacter pylori formamidase AmiF reveals a cysteine-glutamate-lysine catalytic triad J.Biol.Chem., 282, 2007

2E2K

Helicobacter pylori formamidase AmiF contains a fine-tuned cysteine-glutamate-lysine catalytic triad
Descriptor:	Formamidase
Authors:	Wang, W.C, Hung, C.L.
Deposit date:	2006-11-14
Release date:	2007-02-13
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Crystal structure of Helicobacter pylori formamidase AmiF reveals a cysteine-glutamate-lysine catalytic triad J.Biol.Chem., 282, 2007

2E2L

Helicobacter pylori formamidase AmiF contains a fine-tuned cysteine-glutamate-lysine catalytic triad
Descriptor:	FORMAMIDE, Formamidase
Authors:	Wang, W.C, Hung, C.L.
Deposit date:	2006-11-14
Release date:	2007-02-13
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.29 Å)
Cite:	Crystal structure of Helicobacter pylori formamidase AmiF reveals a cysteine-glutamate-lysine catalytic triad J.Biol.Chem., 282, 2007

3SFW

Crystal structure of dihydropyrimidinase from Brevibacillus agri NCHU1002
Descriptor:	ACETATE ION, Dihydropyrimidinase, ZINC ION
Authors:	Wang, W.C, Wu, H.M.
Deposit date:	2011-06-14
Release date:	2012-06-20
Last modified:	2023-12-06
Method:	X-RAY DIFFRACTION (1.73 Å)
Cite:	Crystal structure of dihydropyrimidinase from Brevibacillus agri NCHU1002 To be Published

2GHW

Crystal structure of SARS spike protein receptor binding domain in complex with a neutralizing antibody, 80R
Descriptor:	CHLORIDE ION, Spike glycoprotein, anti-sars scFv antibody, ...
Authors:	Hwang, W.C, Lin, Y, Santelli, E, Sui, J, Jaroszewski, L, Stec, B, Farzan, M, Marasco, W.A, Liddington, R.C.
Deposit date:	2006-03-27
Release date:	2006-09-19
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Structural basis of neutralization by a human anti-severe acute respiratory syndrome spike protein antibody, 80R. J.Biol.Chem., 281, 2006

2GHV

Crystal structure of SARS spike protein receptor binding domain
Descriptor:	Spike glycoprotein
Authors:	Hwang, W.C, Lin, Y, Santelli, E, Sui, J, Jaroszewski, L, Stec, B, Farzan, M, Marasco, W.A, Liddington, R.C.
Deposit date:	2006-03-27
Release date:	2006-09-19
Last modified:	2011-07-13
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Structural basis of neutralization by a human anti-severe acute respiratory syndrome spike protein antibody, 80R. J.Biol.Chem., 281, 2006

3FKU

Crystal structure of influenza hemagglutinin (H5) in complex with a broadly neutralizing antibody F10
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, Neutralizing antibody F10, ...
Authors:	Hwang, W.C, Santelli, E, Stec, B, Wei, G, Cadwell, G, Bankston, L.A, Sui, J, Perez, S, Aird, D, Chen, L.M, Ali, M, Murakami, A, Yammanuru, A, Han, T, Cox, N, Donis, R.O, Liddington, R.C, Marasco, W.A.
Deposit date:	2008-12-17
Release date:	2009-02-24
Last modified:	2020-07-29
Method:	X-RAY DIFFRACTION (3.2 Å)
Cite:	Structural and functional bases for broad-spectrum neutralization of avian and human influenza A viruses. Nat.Struct.Mol.Biol., 16, 2009

1ZUH

Structural Basis for Shikimate-binding Specificity of Helicobacter pylori Shikimate Kinase
Descriptor:	Shikimate kinase
Authors:	Cheng, W.C, Chang, Y.N, Wang, W.C.
Deposit date:	2005-05-31
Release date:	2006-05-31
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Structural basis for shikimate-binding specificity of Helicobacter pylori shikimate kinase J.Bacteriol., 187, 2005

1ZUI

Structural Basis for Shikimate-binding Specificity of Helicobacter pylori Shikimate Kinase
Descriptor:	(3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, PHOSPHATE ION, Shikimate kinase
Authors:	Cheng, W.C, Chang, Y.N, Wang, W.C.
Deposit date:	2005-05-31
Release date:	2006-05-31
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Structural basis for shikimate-binding specificity of Helicobacter pylori shikimate kinase J.Bacteriol., 187, 2005

3HR7

Crystal structure of the shikimate kinase-sulfate complex from Helicobacter pylori
Descriptor:	SULFATE ION, Shikimate kinase
Authors:	Cheng, W.C, Wang, W.C.
Deposit date:	2009-06-09
Release date:	2010-06-16
Last modified:	2023-11-01
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Structures of Helicobacter pylori shikimate kinase reveal a selective inhibitor-induced-fit mechanism Plos One, 7, 2012

12 3 >

Total results:	55
Displayed results:	25
Sorted by:	Hit score (from highest)
Deposition authors:	"Wang, W.C."