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PDB: 508 results

6A8L
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BU of 6a8l by Molmil
Crystal structure of nicotinamidase/ pyrazinamidase PncA from Bacillus subtilis
Descriptor: Isochorismatase, ZINC ION
Authors:Shang, F, Chen, J, Wang, L, Xu, Y.
Deposit date:2018-07-09
Release date:2018-08-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the nicotinamidase/pyrazinamidase PncA from Bacillus subtilis.
Biochem. Biophys. Res. Commun., 503, 2018
5ZZO
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BU of 5zzo by Molmil
Crystal structure of CcpE regulatory domain in complex with citrate from Staphyloccocus aureus
Descriptor: CITRATE ANION, LysR family transcriptional regulator
Authors:Chen, J, Wang, L, Shang, F, Xu, Y.
Deposit date:2018-06-04
Release date:2018-06-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and Biochemical Analysis of the Citrate-Responsive Mechanism of the Regulatory Domain of Catabolite Control Protein E from Staphylococcus aureus
Biochemistry, 57, 2018
3U1M
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BU of 3u1m by Molmil
Structure of the mRNA splicing complex component Cwc2
Descriptor: Pre-mRNA-splicing factor CWC2, ZINC ION
Authors:Lu, P, Lu, G, Yan, C, Wang, L, Li, W, Yin, P.
Deposit date:2011-09-30
Release date:2011-11-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of the mRNA splicing complex component Cwc2: insights into RNA recognition
Biochem.J., 441, 2012
4N0G
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BU of 4n0g by Molmil
Crystal Structure of PYL13-PP2CA complex
Descriptor: Abscisic acid receptor PYL13, MAGNESIUM ION, Protein phosphatase 2C 37, ...
Authors:Li, W, Wang, L, Sheng, X, Yan, C, Zhou, R, Hang, J, Yin, P, Yan, N.
Deposit date:2013-10-01
Release date:2013-11-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.382 Å)
Cite:Molecular basis for the selective and ABA-independent inhibition of PP2CA by PYL13
Cell Res., 23, 2013
7DRI
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BU of 7dri by Molmil
Structure of SspE_CTD_41658
Descriptor: DUF1524 domain
Authors:Haiyan, G, Jinchuan, Z, Chen, S, Wang, L, Wu, G.
Deposit date:2020-12-28
Release date:2022-06-29
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Nicking mechanism underlying the DNA phosphorothioate-sensing antiphage defense by SspE.
Nat Commun, 13, 2022
4MZ4
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BU of 4mz4 by Molmil
Discovery of an Irreversible HCV NS5B Polymerase Inhibitor
Descriptor: 1-[(2-chloroquinolin-3-yl)methyl]-6-fluoro-5-methyl-3-(2-oxo-1,2-dihydropyridin-3-yl)-1H-indole-2-carboxylic acid, PHOSPHATE ION, RNA-directed RNA polymerase
Authors:Zeng, Q, Anilkumar, G.N, Rosenblum, S.B, Huang, H.-C, Lesburg, C.A, Jiang, Y, Selyutin, O, Chan, T.-Y, Bennett, F, Chen, K.X, Venkatraman, S, Sannigrahi, M, Velazquez, F, Duca, J.S, Gavalas, S, Huang, Y, Pu, H, Wang, L, Pinto, P, Vibulbhan, B, Agrawal, S, Ferrari, E, Jiang, C.-K, Li, C, Hesk, D, Gesell, J, Sorota, S, Shih, N.-Y, Njoroge, F.G, Kozlowski, J.A.
Deposit date:2013-09-29
Release date:2013-12-11
Last modified:2013-12-18
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Discovery of an irreversible HCV NS5B polymerase inhibitor.
Bioorg.Med.Chem.Lett., 23, 2013
5ZN8
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BU of 5zn8 by Molmil
Crystal structure of nicotinamidase PncA from Bacillus subtilis
Descriptor: Isochorismatase, ZINC ION
Authors:Shang, F, Chen, J, Wang, L, Xu, Y.
Deposit date:2018-04-08
Release date:2018-04-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the nicotinamidase/pyrazinamidase PncA from Bacillus subtilis.
Biochem.Biophys.Res.Commun., 503, 2018
7X4E
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BU of 7x4e by Molmil
Structure of 10635-DndE
Descriptor: DNA sulfur modification protein DndE, GLYCEROL
Authors:Haiyan, G, Wei, H, Chen, S, Wang, L, Wu, G.
Deposit date:2022-03-02
Release date:2022-04-20
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural and Functional Analysis of DndE Involved in DNA Phosphorothioation in the Haloalkaliphilic Archaea Natronorubrum bangense JCM10635.
Mbio, 13, 2022
3U4R
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BU of 3u4r by Molmil
Novel HCV NS5B polymerase Inhibitors: Discovery of Indole C2 Acyl sulfonamides
Descriptor: 1-[(2-aminopyridin-4-yl)methyl]-5-chloro-N-({3-[(methylsulfonyl)amino]phenyl}sulfonyl)-3-(2-oxo-1,2-dihydropyridin-3-yl)-1H-indole-2-carboxamide, RNA-directed RNA polymerase
Authors:Anilkumar, G.N, Selyutin, O, Rosenblum, S.B, Zeng, Q, Jiang, Y, Chan, T.-Y, Pu, H, Wang, L, Bennett, F, Chen, K.X, Lesburg, C.A, Duca, J.S, Gavalas, S, Huang, Y, Pinto, P, Sannagrahi, M, Velazquez, F, Venkataraman, S, Vilbubhan, B, Agrawal, S, Ferrari, E, Jiang, C.-K, Huang, H.-C, Shih, N.-Y, Njoroge, F.G, Kozlowski, J.A.
Deposit date:2011-10-10
Release date:2011-12-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:II. Novel HCV NS5B polymerase inhibitors: Discovery of indole C2 acyl sulfonamides.
Bioorg.Med.Chem.Lett., 22, 2012
3U1L
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BU of 3u1l by Molmil
Structure of the mRNA splicing complex component Cwc2
Descriptor: Pre-mRNA-splicing factor CWC2, ZINC ION
Authors:Lu, P, Lu, G, Yan, C, Wang, L, Li, W, Yin, P.
Deposit date:2011-09-30
Release date:2011-11-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure of the mRNA splicing complex component Cwc2: insights into RNA recognition
Biochem.J., 441, 2012
5Y9Q
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BU of 5y9q by Molmil
Crystal structure of the CcpE regulatory domain at 1.95 Angstrom from Staphylococcus aureus
Descriptor: Carbon catabolite responsive regulator
Authors:Chen, J, Wang, L, Shang, F, Xu, Y.
Deposit date:2017-08-27
Release date:2017-09-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.953 Å)
Cite:Structural and Biochemical Analysis of the Citrate-Responsive Mechanism of the Regulatory Domain of Catabolite Control Protein E from Staphylococcus aureus
Biochemistry, 57, 2018
3U4O
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BU of 3u4o by Molmil
Novel HCV NS5B polymerase Inhibitors: Discovery of Indole C2 Acyl sulfonamides
Descriptor: 1-[(2-aminopyridin-4-yl)methyl]-5-chloro-3-(2-oxo-1,2-dihydropyridin-3-yl)-1H-indole-2-carboxylic acid, PHOSPHATE ION, RNA-directed RNA polymerase
Authors:Anilkumar, G.N, Selyutin, O, Rosenblum, S.B, Zeng, Q, Jiang, Y, Chan, T.-Y, Pu, H, Wang, L, Bennett, F, Chen, K.X, Lesburg, C.A, Duca, J.S, Gavalas, S, Huang, Y, Pinto, P, Sannigrahi, M, Velazquez, F, Venkataraman, S, Vilbubhan, B, Agrawal, S, Ferrari, E, Jiang, C.-K, Huang, H.-C, Shih, N.-Y, Njoroge, F.G, Kozlowski, J.A.
Deposit date:2011-10-10
Release date:2011-12-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:II. Novel HCV NS5B polymerase inhibitors: Discovery of indole C2 acyl sulfonamides.
Bioorg.Med.Chem.Lett., 22, 2012
6A2H
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BU of 6a2h by Molmil
Architectural roles of Cren7 in folding crenarchaeal chromatin filament
Descriptor: Chromatin protein Cren7, DNA (5'-D(P*AP*AP*TP*TP*AP*C)-3'), DNA (5'-D(P*GP*TP*AP*AP*TP*T)-3')
Authors:Zhang, Z.F, Zhao, M.H, Chen, Y.Y, Wang, L, Dong, Y.H, Gong, Y, Huang, L.
Deposit date:2018-06-11
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Architectural roles of Cren7 in folding crenarchaeal chromatin filament.
Mol. Microbiol., 111, 2019
7DRS
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BU of 7drs by Molmil
Structure of SspE_40224
Descriptor: SspE protein
Authors:Haiyan, G, Jinchuan, Z, Chen, S, Wang, L, Wu, G.
Deposit date:2020-12-29
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.42 Å)
Cite:Nicking mechanism underlying the DNA phosphorothioate-sensing antiphage defense by SspE.
Nat Commun, 13, 2022
7DRR
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BU of 7drr by Molmil
Structure of SspE-R100A protein
Descriptor: SspE protein
Authors:Haiyan, G, Jinchuan, Z, Chen, S, Wang, L, Wu, G.
Deposit date:2020-12-29
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:Nicking mechanism underlying the DNA phosphorothioate-sensing antiphage defense by SspE.
Nat Commun, 13, 2022
6A2I
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BU of 6a2i by Molmil
Architectural roles of Cren7 in folding crenarchaeal chromatin filament
Descriptor: Chromatin protein Cren7, DNA (5'-D(*CP*GP*TP*AP*GP*CP*TP*AP*AP*TP*TP*AP*GP*CP*TP*AP*CP*G)-3')
Authors:Zhang, Z.F, Zhao, M.H, Chen, Y.Y, Wang, L, Dong, Y.H, Gong, Y, Huang, L.
Deposit date:2018-06-11
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Architectural roles of Cren7 in folding crenarchaeal chromatin filament.
Mol. Microbiol., 111, 2019
6JBJ
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BU of 6jbj by Molmil
Cryo-EM structure of human lysosomal cobalamin exporter ABCD4
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding cassette sub-family D member 4
Authors:Xu, D, Feng, Z, Hou, W.T, Jiang, Y.L, Wang, L, Sun, L.F, Zhou, C.Z, Chen, Y.
Deposit date:2019-01-25
Release date:2019-09-11
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of human lysosomal cobalamin exporter ABCD4.
Cell Res., 29, 2019
2ODA
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BU of 2oda by Molmil
Crystal Structure of PSPTO_2114
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Hypothetical protein PSPTO_2114, MAGNESIUM ION
Authors:Peisach, E, Allen, K.N, Dunaway-Mariano, D, Wang, L, Burroughs, A.M, Aravind, L.
Deposit date:2006-12-22
Release date:2007-09-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The X-ray crystallographic structure and activity analysis of a Pseudomonas-specific subfamily of the HAD enzyme superfamily evidences a novel biochemical function.
Proteins, 70, 2007
8V6U
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BU of 8v6u by Molmil
5HT2AR-miniGq heterotrimer in complex with a novel agonist obtained from large scale docking
Descriptor: 4-{(3R)-1-[(1R)-1-(pyrimidin-2-yl)ethyl]piperidin-3-yl}phenol, 5-hydroxytryptamine receptor 2A, G protein alpha-subunit q (Gi2-mini-Gq chimera), ...
Authors:Gumpper, R.H, Wang, L, Kapolka, N, Skiniotis, G, Roth, B.L.
Deposit date:2023-12-03
Release date:2024-05-29
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3 Å)
Cite:AlphaFold2 structures guide prospective ligand discovery.
Science, 384, 2024
2MY9
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BU of 2my9 by Molmil
Solution structure of N-terminal domain of human TIG3
Descriptor: Retinoic acid receptor responder protein 3
Authors:Wei, H, Wang, L, Xia, B.
Deposit date:2015-01-21
Release date:2015-04-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural and functional characterization of tumor suppressors TIG3 and H-REV107.
Febs Lett., 589, 2015
3TY5
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BU of 3ty5 by Molmil
Crystal Structure of C. thermocellum PNKP Ligase domain in complex with ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Polynucleotide 2',3'-cyclic phosphate phosphodiesterase / polynucleotide 5'-hydroxyl-kinase / polynucleotide 3'-phosphatase, ...
Authors:Smith, P, Wang, L, Shuman, S.
Deposit date:2011-09-23
Release date:2012-01-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The adenylyltransferase domain of bacterial Pnkp defines a unique RNA ligase family.
Proc.Natl.Acad.Sci.USA, 109, 2012
7VFA
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BU of 7vfa by Molmil
the complex of SARS-CoV2 3CL and NB1A2
Descriptor: 3C-like proteinase, NB1A2, SULFATE ION
Authors:Sun, Z.C, Wang, L, Geng, Y.
Deposit date:2021-09-11
Release date:2022-03-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:An extended conformation of SARS-CoV-2 main protease reveals allosteric targets.
Proc.Natl.Acad.Sci.USA, 119, 2022
7VFB
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BU of 7vfb by Molmil
the complex of SARS-CoV2 3cl and NB2B4
Descriptor: 3C-like proteinase, nb2b4
Authors:Geng, Y, Sun, Z.C, Wang, L.
Deposit date:2021-09-11
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:An extended conformation of SARS-CoV-2 main protease reveals allosteric targets.
Proc.Natl.Acad.Sci.USA, 119, 2022
3TY8
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BU of 3ty8 by Molmil
Crystal Structure of C. Thermocellum PNKP Ligase Domain Apo Form
Descriptor: D(-)-TARTARIC ACID, GLYCEROL, Polynucleotide 2',3'-cyclic phosphate phosphodiesterase / polynucleotide 5'-hydroxyl-kinase / polynucleotide 3'-phosphatase
Authors:Smith, P, Wang, L, Shuman, S.
Deposit date:2011-09-23
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The adenylyltransferase domain of bacterial Pnkp defines a unique RNA ligase family.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TY9
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BU of 3ty9 by Molmil
Crystal Structure of C. Thermocellum PNKP Ligase Domain AMP-Adenylate
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE MONOPHOSPHATE, ...
Authors:Smith, P, Wang, L, Shuman, S.
Deposit date:2011-09-24
Release date:2012-01-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:The adenylyltransferase domain of bacterial Pnkp defines a unique RNA ligase family.
Proc.Natl.Acad.Sci.USA, 109, 2012

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