Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1362 results

3QZQ
DownloadVisualize
BU of 3qzq by Molmil
Human enterovirus 71 3C protease mutant E71D in complex with rupintrivir
Descriptor: 3C protein, 4-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE-3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER
Authors:Wang, J, Fan, T, Yao, X, Wu, Z, Guo, L, Lei, X, Wang, J, Wang, M, Jin, Q, Cui, S.
Deposit date:2011-03-07
Release date:2011-08-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7001 Å)
Cite:Crystal Structures of Enterovirus 71 3C Protease Complexed with Rupintrivir Reveal the Roles of Catalytically Important Residues.
J.Virol., 85, 2011
3R0F
DownloadVisualize
BU of 3r0f by Molmil
Human enterovirus 71 3C protease mutant H133G in complex with rupintrivir
Descriptor: 1,2-ETHANEDIOL, 3C protein, 4-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE-3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER
Authors:Wang, J, Fan, T, Yao, X, Wu, Z, Guo, L, Lei, X, Wang, J, Wang, M, Jin, Q, Cui, S.
Deposit date:2011-03-08
Release date:2011-08-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.3083 Å)
Cite:Crystal Structures of Enterovirus 71 3C Protease Complexed with Rupintrivir Reveal the Roles of Catalytically Important Residues.
J.Virol., 85, 2011
1K6Y
DownloadVisualize
BU of 1k6y by Molmil
Crystal Structure of a Two-Domain Fragment of HIV-1 Integrase
Descriptor: Integrase, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Wang, J, Ling, H, Yang, W, Craigie, R.
Deposit date:2001-10-17
Release date:2001-12-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of a two-domain fragment of HIV-1 integrase: implications for domain organization in the intact protein.
EMBO J., 20, 2001
1TYF
DownloadVisualize
BU of 1tyf by Molmil
THE STRUCTURE OF CLPP AT 2.3 ANGSTROM RESOLUTION SUGGESTS A MODEL FOR ATP-DEPENDENT PROTEOLYSIS
Descriptor: CLP PEPTIDASE
Authors:Wang, J, Hartling, J.A, Flanagan, J.M.
Deposit date:1997-10-13
Release date:1998-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structure of ClpP at 2.3 A resolution suggests a model for ATP-dependent proteolysis.
Cell(Cambridge,Mass.), 91, 1997
8KGE
DownloadVisualize
BU of 8kge by Molmil
Dimeric tail tube protein gpVs of bacteriophage lambda
Descriptor: Tail tube protein
Authors:Wang, J.W.
Deposit date:2023-08-18
Release date:2023-10-18
Last modified:2024-01-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Architecture of the bacteriophage lambda tail.
Structure, 32, 2024
5MXN
DownloadVisualize
BU of 5mxn by Molmil
Atomic model of the VipA/VipB/Hcp, the type six secretion system non-contractile sheath-tube of Vibrio cholerae from cryo-EM
Descriptor: Haemolysin co-regulated protein, Type VI secretion protein
Authors:Wang, J, Brackmann, M, Castano-Diez, D, Kudryashev, M, Goldie, K, Maier, T, Stahlberg, H, Basler, M.
Deposit date:2017-01-23
Release date:2017-08-02
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of the extended type VI secretion system sheath-tube complex.
Nat Microbiol, 2, 2017
8IGA
DownloadVisualize
BU of 8iga by Molmil
Crystal structure of SARS-Cov-2 main protease K90R mutant in complex with GC376
Descriptor: 3C-like proteinase nsp5, N~2~-[(benzyloxy)carbonyl]-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide
Authors:Wang, J, Zhang, J, Li, J.
Deposit date:2023-02-20
Release date:2024-03-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural Basis for Coronaviral Main Proteases Inhibition by the 3CLpro Inhibitor GC376.
J.Mol.Biol., 436, 2024
3QZR
DownloadVisualize
BU of 3qzr by Molmil
Human enterovirus 71 3C protease mutant E71A in complex with rupintrivir
Descriptor: 1,2-ETHANEDIOL, 3C protein, 4-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE-3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER
Authors:Wang, J, Fan, T, Yao, X, Wu, Z, Guo, L, Lei, X, Wang, J, Wang, M, Jin, Q, Cui, S.
Deposit date:2011-03-07
Release date:2011-08-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.039 Å)
Cite:Crystal Structures of Enterovirus 71 3C Protease Complexed with Rupintrivir Reveal the Roles of Catalytically Important Residues.
J.Virol., 85, 2011
6CCP
DownloadVisualize
BU of 6ccp by Molmil
EFFECT OF ARGININE-48 REPLACEMENT ON THE REACTION BETWEEN CYTOCHROME C PEROXIDASE AND HYDROGEN PEROXIDE
Descriptor: CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Wang, J, Miller, M.A, Kraut, J.
Deposit date:1993-06-07
Release date:1993-10-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Effect of arginine-48 replacement on the reaction between cytochrome c peroxidase and hydrogen peroxide.
Biochemistry, 32, 1993
5MYU
DownloadVisualize
BU of 5myu by Molmil
VipA-N2/VipB contracted sheath of type VI secretion system
Descriptor: Type VI secretion system protein ImpC, Uncharacterized protein
Authors:Wang, J, Brackmann, B, Castano-Diez, D, Kudryashev, M, Goldie, D, Maier, T, Stahlberg, H, Basler, M.
Deposit date:2017-01-27
Release date:2017-08-02
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM structure of the extended type VI secretion system sheath-tube complex.
Nat Microbiol, 2, 2017
2VB1
DownloadVisualize
BU of 2vb1 by Molmil
HEWL at 0.65 angstrom resolution
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, LYSOZYME C, ...
Authors:Wang, J, Dauter, M, Alkire, R, Joachimiak, A, Dauter, Z.
Deposit date:2007-09-05
Release date:2007-09-18
Last modified:2023-03-08
Method:X-RAY DIFFRACTION (0.65 Å)
Cite:Triclinic Lysozyme at 0.65 A Resolution.
Acta Crystallogr.,Sect.D, 63, 2007
2KLJ
DownloadVisualize
BU of 2klj by Molmil
Solution Structure of gammaD-Crystallin with RDC and SAXS
Descriptor: Gamma-crystallin D
Authors:Wang, J, Zuo, X, Yu, P, Byeon, I, Jung, J, Gronenborn, A.M, Wang, Y.
Deposit date:2009-07-06
Release date:2009-10-06
Last modified:2024-05-22
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Determination of multicomponent protein structures in solution using global orientation and shape restraints.
J.Am.Chem.Soc., 131, 2009
2KLM
DownloadVisualize
BU of 2klm by Molmil
Solution Structure of L11 with SAXS and RDC
Descriptor: 50S ribosomal protein L11
Authors:Wang, J, Zuo, X, Yu, P, Schwieters, C.D, Wang, Y.
Deposit date:2009-07-06
Release date:2009-10-06
Last modified:2024-05-22
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Determination of multicomponent protein structures in solution using global orientation and shape restraints.
J.Am.Chem.Soc., 131, 2009
8U8T
DownloadVisualize
BU of 8u8t by Molmil
Y229F/V290N Streptomyces coelicolor Laccase
Descriptor: BORIC ACID, COPPER (II) ION, Copper oxidase, ...
Authors:Wang, J.-X, Lu, Y.
Deposit date:2023-09-18
Release date:2023-11-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Increasing Reduction Potentials of Type 1 Copper Center and Catalytic Efficiency of Small Laccase from Streptomyces coelicolor through Secondary Coordination Sphere Mutations.
Angew.Chem.Int.Ed.Engl., 62, 2023
8U8P
DownloadVisualize
BU of 8u8p by Molmil
S292F Streptomyces coelicolor Laccase
Descriptor: BORIC ACID, COPPER (II) ION, Copper oxidase, ...
Authors:Wang, J.-X, Lu, Y.
Deposit date:2023-09-18
Release date:2023-11-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Increasing Reduction Potentials of Type 1 Copper Center and Catalytic Efficiency of Small Laccase from Streptomyces coelicolor through Secondary Coordination Sphere Mutations.
Angew.Chem.Int.Ed.Engl., 62, 2023
8U8R
DownloadVisualize
BU of 8u8r by Molmil
Y229F/V290N/S292F Streptomyces coelicolor Laccase
Descriptor: BORIC ACID, COPPER (II) ION, Copper oxidase, ...
Authors:Wang, J.-X, Lu, Y.
Deposit date:2023-09-18
Release date:2023-11-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Increasing Reduction Potentials of Type 1 Copper Center and Catalytic Efficiency of Small Laccase from Streptomyces coelicolor through Secondary Coordination Sphere Mutations.
Angew.Chem.Int.Ed.Engl., 62, 2023
8U8Q
DownloadVisualize
BU of 8u8q by Molmil
V290N/S292F Streptomyces coelicolor Laccase
Descriptor: BORIC ACID, COPPER (II) ION, Copper oxidase, ...
Authors:Wang, J.-X, Lu, Y.
Deposit date:2023-09-18
Release date:2023-11-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Increasing Reduction Potentials of Type 1 Copper Center and Catalytic Efficiency of Small Laccase from Streptomyces coelicolor through Secondary Coordination Sphere Mutations.
Angew.Chem.Int.Ed.Engl., 62, 2023
8U8S
DownloadVisualize
BU of 8u8s by Molmil
Y229F/S292F Streptomyces coelicolor Laccase
Descriptor: BORIC ACID, COPPER (II) ION, Copper oxidase, ...
Authors:Wang, J.-X, Lu, Y.
Deposit date:2023-09-18
Release date:2023-11-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Increasing Reduction Potentials of Type 1 Copper Center and Catalytic Efficiency of Small Laccase from Streptomyces coelicolor through Secondary Coordination Sphere Mutations.
Angew.Chem.Int.Ed.Engl., 62, 2023
1LRN
DownloadVisualize
BU of 1lrn by Molmil
Aquifex aeolicus KDO8P synthase H185G mutant in complex with Cadmium
Descriptor: CADMIUM ION, KDO-8-phosphate synthetase, PHOSPHATE ION
Authors:Wang, J, Duewel, H.S, Stuckey, J.A, Woodard, R.W, Gatti, D.L.
Deposit date:2002-05-15
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Function of His185 in Aquifex aeolicus 3-Deoxy-D-manno-octulosonate 8-Phosphate Synthase
J.Mol.Biol., 324, 2002
8FBK
DownloadVisualize
BU of 8fbk by Molmil
Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Descriptor: KWOCA_65
Authors:Wang, J.Y, Khmelinskaia, A, Bera, A.K, King, N.P.
Deposit date:2022-11-29
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FBJ
DownloadVisualize
BU of 8fbj by Molmil
Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Descriptor: KWOCA_60
Authors:Wang, J.Y, Khmelinskaia, A, Bera, A.K, King, N.P.
Deposit date:2022-11-29
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FBO
DownloadVisualize
BU of 8fbo by Molmil
Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Descriptor: KWOCA_102
Authors:Wang, J.Y, Khmelinskaia, A, Bera, A.K, King, N.P.
Deposit date:2022-11-29
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FBN
DownloadVisualize
BU of 8fbn by Molmil
Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Descriptor: KWOCA_73
Authors:Wang, J.Y, Khmelinskaia, A, Bera, A.K, King, N.P.
Deposit date:2022-11-29
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FBI
DownloadVisualize
BU of 8fbi by Molmil
Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Descriptor: KWOCA_39
Authors:Wang, J.Y, Khmelinskaia, A, Bera, A.K, King, N.P.
Deposit date:2022-11-29
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.61 Å)
Cite:Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains.
Proc.Natl.Acad.Sci.USA, 120, 2023
6OM1
DownloadVisualize
BU of 6om1 by Molmil
Crystal structure of an atypical integrin
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, J.C, Springer, T.A.
Deposit date:2019-04-17
Release date:2019-12-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:General structural features that regulate integrin affinity revealed by atypical alpha V beta 8.
Nat Commun, 10, 2019

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon