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PDB: 462 件

6KMB
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Crystal structure of Sth1 bromodomain
分子名称: GLYCEROL, Nuclear protein STH1/NPS1
著者Chen, G, Li, W, Yan, F, Wang, D, Chen, Y.
登録日2019-07-31
公開日2019-10-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The Structural Basis for Specific Recognition of H3K14 Acetylation by Sth1 in the RSC Chromatin Remodeling Complex.
Structure, 28, 2020
6L2N
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Crystal structure of the R.PabI(Y68F-K154A)-dsDNA(GTAC-3bp-GTAC) complex
分子名称: DNA (5'-D(*TP*CP*AP*GP*CP*AP*GP*TP*AP*CP*TP*AP*AP*GP*TP*AP*CP*TP*GP*CP*TP*GP*A)-3'), RE_R_Pab1 domain-containing protein
著者Miyazono, K, Wang, D, Ito, T, Tanokura, M.
登録日2019-10-05
公開日2020-03-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Distortion of double-stranded DNA structure by the binding of the restriction DNA glycosylase R.PabI.
Nucleic Acids Res., 48, 2020
6L2O
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Crystal structure of the R.PabI(Y68F-K154A)-dsDNA(GTAC-5bp-GTAC) complex
分子名称: DNA (5'-D(*CP*A*GP*CP*AP*GP*TP*AP*CP*TP*TP*AP*AP*AP*GP*TP*AP*CP*TP*GP*CP*TP*G)-3'), RE_R_Pab1 domain-containing protein
著者Miyazono, K, Wang, D, Ito, T, Tanokura, M.
登録日2019-10-05
公開日2020-03-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Distortion of double-stranded DNA structure by the binding of the restriction DNA glycosylase R.PabI.
Nucleic Acids Res., 48, 2020
6M3L
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Crystal structure of the R.PabI(Y68F-K154A)-dsDNA(nonspecific) complex
分子名称: DNA (5'-D(*CP*GP*CP*AP*TP*CP*GP*AP*TP*TP*CP*AP*GP*AP*AP*TP*CP*GP*AP*TP*GP*CP*G)-3'), RE_R_Pab1 domain-containing protein
著者Miyazono, K, Wang, D, Ito, T, Tanokura, M.
登録日2020-03-04
公開日2020-03-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Distortion of double-stranded DNA structure by the binding of the restriction DNA glycosylase R.PabI.
Nucleic Acids Res., 48, 2020
6LSV
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Crystal structure of JOX2 in complex with 2OG, Fe, and JA
分子名称: 2-OXOGLUTARIC ACID, FE (III) ION, Probable 2-oxoglutarate-dependent dioxygenase At5g05600, ...
著者Zhang, X, Wang, D, Liu, J.
登録日2020-01-20
公開日2021-02-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.651 Å)
主引用文献Structure-guided analysis of Arabidopsis JASMONATE-INDUCED OXYGENASE (JOX) 2 reveals key residues for recognition of jasmonic acid substrate by plant JOXs.
Mol Plant, 14, 2021
2K5G
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Solution NMR structure of protein encoded by gene BPP1335 from Bordetella parapertussis: Northeast Structural Genomics Target BpR195
分子名称: uncharacterized protein
著者Singarapu, K, Eletsky, A, Sathyamoorthy, B, Sukumaran, D, Wang, D, Jiang, M, Ciccosanti, C, Xiao, R, Liu, J, Baran, M.C, Swapna, G, Acton, T.B, Rost, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
登録日2008-06-27
公開日2008-09-02
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution NMR structure of protein encoded by gene BPP1335 from Bordetella parapertussis: Northeast Structural Genomics Target BpR195
To be Published
2KAT
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Solution structure of protein BPP2914 from Bordetella parapertussis. Northeast Structural Genomics Consortium target BpR206
分子名称: uncharacterized protein
著者Wu, Y, Mills, J.L, Wang, D, Jiang, M, Foote, E.L, Xiao, R, Sathyamoorthy, B, Sukumaran, D, Nair, R, Everett, J.K, Swapna, G, Acton, T.B, Rost, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
登録日2008-11-14
公開日2008-12-16
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution structure of protein BPP2914 from Bordetella parapertussis. Northeast Structural Genomics Consortium target BpR206
To be Published
2JZ2
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Solution NMR structure of Ssl0352 protein from Synechocystis sp. PCC 6803. Northeast Structural Genomics Consortium target SgR42
分子名称: Ssl0352 protein
著者Eletsky, A, Sukumaran, D, Wang, D, Hamilton, K, Foote, E.L, Xiao, R, Liu, J, Baran, M.C, Swapna, G.V.T, Acton, T.B, Rost, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
登録日2007-12-22
公開日2008-01-22
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution NMR structure of Ssl0352 protein from Synechocystis sp.
To be Published
2JY9
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NMR structure of putative tRNA hydrolase domain from Salmonella typhimurium. NorthEast Structural Genomics Consortium target StR220
分子名称: Putative tRNA hydrolase domain
著者Singarapu, K.K, Wu, Y, Sukumaran, D, Eletsky, A, Zeri, A, Wang, D, Janjua, H, Owens, L, Xiao, R, Liu, J, Baran, M.C, Swapna, G.V.T, Acton, T.B, Rost, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
登録日2007-12-07
公開日2008-01-01
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献NMR structure of putative tRNA hydrolase domain from Salmonella typhimurium.
To be Published
7OR0
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Cryo-EM structure of the human TRPA1 ion channel in complex with the antagonist 3-60, conformation 2
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Grieben, M, Pike, A.C.W, Saward, B.G, Wang, D, Mukhopadhyay, S.M.M, Moreira, T, Chalk, R, MacLean, E.M, Marsden, B.D, Burgess-Brown, N.A, Bountra, C, Schofield, C.J, Carpenter, E.P.
登録日2021-06-04
公開日2022-06-22
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献Cryo-EM structure of the human TRPA1 ion channel in complex with the antagonist 3-60
To Be Published
2KHV
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Solution NMR structure of protein Nmul_A0922 from Nitrosospira multiformis. Northeast Structural Genomics Consortium target NmR38B.
分子名称: Phage integrase
著者Wu, Y, Mills, J.L, Wang, D, Ciccosanti, C, Sukumaran, D.K, Jiang, M, Garcia, E, Nair, R, Rost, B, Swapna, G.V.T, Acton, T.B, Xiao, R, Everett, J, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
登録日2009-04-13
公開日2009-04-21
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution NMR structure of protein Nmul_A0922 from Nitrosospira multiformis. Northeast Structural Genomics Consortium target NmR38B.
To be Published
8HW6
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Crystal structure of Heterodera glycines chitinase 2
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Chen, W, Chen, Q, Wang, D, Yang, Q.
登録日2022-12-29
公開日2024-06-05
実験手法X-RAY DIFFRACTION (1.923 Å)
主引用文献Crystal structure of Heterodera glycines chitinase 2
To Be Published
8HW7
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Crystal structure of Heterodera glycines chitinase 2 D129A/E131A mutant in complex with chitopentaose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase
著者Chen, W, Chen, Q, Wang, D, Yang, Q.
登録日2022-12-29
公開日2024-06-05
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of Heterodera glycines chitinase 2 D129A/E131A mutant in complex with chitopentaose
To Be Published
8HW8
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Crystal structure of Heterodera glycines chitinase 2 D129A/E131A mutant in complex with nodulation factor SmNF-V (C16:2, S)
分子名称: (2~{Z},9~{E})-~{N}-[(2~{R},3~{S},4~{R},5~{S},6~{S})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]hexadeca-2,9-dienamide, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-6-O-sulfo-beta-D-glucopyranose, ...
著者Chen, W, Chen, Q, Wang, D, Yang, Q.
登録日2022-12-29
公開日2024-06-05
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Crystal structure of Heterodera glycines chitinase 2 D129A/E131A mutant in complex with nodulation factor SmNF-V (C16:2, S)
To Be Published
2J22
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Structure of a Streptococcus pneumoniae fucose binding module, SpX-3
分子名称: CALCIUM ION, FUCOLECTIN-RELATED PROTEIN, GLYCEROL
著者Boraston, A.B, Wang, D, Burke, R.D.
登録日2006-08-15
公開日2006-09-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Blood Group Antigen Recognition by a Streptococcus Pneumoniae Virulence Factor
J.Biol.Chem., 281, 2006
2KLB
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NMR Solution structure of a diflavin flavoprotein A3 from Nostoc sp. PCC 7120, Northeast Structural Genomics Consortium Target NsR431C
分子名称: Putative diflavin flavoprotein A 3
著者Swapna, G.V.T, Ciccosanti, C, Wang, D, Jiang, M, Xiao, R, Acton, T.B, Everett, J.K, Nair, R, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2009-06-30
公開日2009-07-21
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献NMR Solution structure of a diflavin flavoprotein A3 from Nostoc sp. PCC 7120, Northeast Structural Genomics Consortium Target NsR431C
To be Published
2KK1
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Solution structure of C-terminal Domain of Tyrosine-protein kinase ABL2 from Homo sapiens, Northeast Structural Genomics Consortium (NESG) target HR5537A
分子名称: Tyrosine-protein kinase ABL2
著者Liu, G, Wang, D, Nwosu, C, Owens, L, Xiao, R, Liu, J, Baran, M.C, Swapna, G, Acton, T.B, Rost, B, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2009-06-14
公開日2009-08-11
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献NMR structure of F-actin-binding domain of Arg/Abl2 from Homo sapiens.
Proteins, 78, 2010
2KKL
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Solution NMR structure of FHA domain of Mb1858 from Mycobacterium bovis. Northeast Structural Genomics Consortium Target MbR243C (24-155).
分子名称: Uncharacterized protein Mb1858
著者Yang, Y, Ramelot, T.A, Wang, D, Foote, E.L, Jiang, M, Nair, R, Rost, B, Swapna, G, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
登録日2009-06-25
公開日2009-07-07
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution NMR structure of FHA domain of Mb1858 from Mycobacterium bovis. Northeast Structural Genomics Consortium Target MbR243C (24-155).
To be Published
2J1R
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Structure of a Streptococcus pneumoniae fucose binding module
分子名称: CALCIUM ION, FUCOLECTIN-RELATED PROTEIN
著者Boraston, A.B, Wang, D, Burke, R.D.
登録日2006-08-15
公開日2006-09-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Blood Group Antigen Recognition by a Streptococcus Pneumoniae Virulence Factor.
J.Biol.Chem., 281, 2006
2J1V
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Structure of a Streptococcus pneumoniae fucose binding module in complex with the blood group H-trisaccharide
分子名称: CALCIUM ION, FUCOLECTIN-RELATED PROTEIN, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Boraston, A.B, Wang, D, Burke, R.D.
登録日2006-08-15
公開日2006-09-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Blood Group Antigen Recognition by a Streptococcus Pneumoniae Virulence Factor
J.Biol.Chem., 281, 2006
2J43
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Alpha-glucan recognition by family 41 carbohydrate-binding modules from streptococcal virulence factors
分子名称: SPYDX
著者Lammerts van Bueren, A, Higgins, M, Wang, D, Burke, R.D, Boraston, A.B.
登録日2006-08-24
公開日2006-12-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Identification and Structural Basis of Binding to Host Lung Glycogen by Streptococcal Virulence Factors.
Nat.Struct.Mol.Biol., 14, 2007
2J44
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Alpha-glucan binding by a streptococcal virulence factor
分子名称: ALKALINE AMYLOPULLULANASE, ZINC ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
著者Lammerts van Bueren, A, Higgins, M, Wang, D, Burke, R.D, Boraston, A.B.
登録日2006-08-24
公開日2006-12-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Identification and Structural Basis of Binding to Host Lung Glycogen by Streptococcal Virulence Factors.
Nat.Struct.Mol.Biol., 14, 2007
2J1U
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Structure of a Streptococcus pneumoniae fucose binding module in complex with the blood group A-tetrasaccharide
分子名称: CALCIUM ION, FUCOLECTIN-RELATED PROTEIN, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Boraston, A.B, Wang, D, Burke, R.D.
登録日2006-08-15
公開日2006-09-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Blood Group Antigen Recognition by a Streptococcus Pneumoniae Virulence Factor
J.Biol.Chem., 281, 2006
2KVO
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Solution NMR structure of Photosystem II reaction center Psb28 protein from Synechocystis sp.(strain PCC 6803), Northeast Structural Genomics Consortium Target SgR171
分子名称: Photosystem II reaction center psb28 protein
著者Yang, Y, Ramelot, T.A, Cort, J.R, Wang, D, Ciccosanti, C, Hamilton, K, Nair, R, Rost, B, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
登録日2010-03-22
公開日2010-04-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution NMR structure of photosystem II reaction center protein Psb28 from Synechocystis sp. Strain PCC 6803.
Proteins, 79, 2011
2J1S
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Structure of a Streptococcus pneumoniae fucose binding module in complex with fucose
分子名称: CALCIUM ION, FUCOLECTIN-RELATED PROTEIN, beta-L-fucopyranose
著者Boraston, A.B, Wang, D, Burke, R.D.
登録日2006-08-15
公開日2006-09-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Blood Group Antigen Recognition by a Streptococcus Pneumoniae Virulence Factor
J.Biol.Chem., 281, 2006

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