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PDB: 140 件

1QYP
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THERMOCOCCUS CELER RPB9, NMR, 25 STRUCTURES
分子名称: RNA POLYMERASE II, ZINC ION
著者Wang, B, Jones, D.N.M, Kaine, B.P, Weiss, M.A.
登録日1997-08-19
公開日1997-12-24
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献High-resolution structure of an archaeal zinc ribbon defines a general architectural motif in eukaryotic RNA polymerases.
Structure, 6, 1998
6TR2
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Pre-folded structures govern folding pathways of human telomeric G-quadruplexes
分子名称: DNA (5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3')
著者Wang, B, Frelih, T, Plavec, J, Sket, P.
登録日2019-12-17
公開日2020-01-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Pre-folded structures govern folding pathways of human telomeric G-quadruplexes.
Nucleic Acids Res., 48, 2020
8JIH
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human telomere two-quartet G-quadruplex at pH 5.0
分子名称: DNA (5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*G)-3')
著者Wang, B, Galer, P, Plavec, J.
登録日2023-05-26
公開日2024-04-03
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Unveiling the structural mechanism of a G-quadruplex pH-Driven switch.
Biochimie, 214, 2023
8JIC
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human telomere two-quartet G-quadruplex at pH 7.0
分子名称: DNA (5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*G)-3')
著者Wang, B, Galer, P, Plavec, J.
登録日2023-05-26
公開日2024-04-03
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Unveiling the structural mechanism of a G-quadruplex pH-Driven switch.
Biochimie, 214, 2023
9ASI
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Cryo-EM structure of the active Lactococcus lactis Csm bound to target in pre-cleavage stage
分子名称: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, CRISPR RNA, ...
著者Wang, B, Goswami, H.N, Li, H.
登録日2024-02-25
公開日2024-08-14
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Molecular basis for cA6 synthesis by a type III-A CRISPR-Cas enzyme and its conversion to cA4 production.
Nucleic Acids Res., 52, 2024
9ASH
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Cryo-EM structure of the active Lactococcus lactis Csm bound to target in post-cleavage stage
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CRISPR RNA, CRISPR system Cms endoribonuclease Csm3, ...
著者Wang, B, Goswami, H.N, Li, H.
登録日2024-02-25
公開日2024-08-14
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献Molecular basis for cA6 synthesis by a type III-A CRISPR-Cas enzyme and its conversion to cA4 production.
Nucleic Acids Res., 52, 2024
6LND
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Crystal structure of transposition protein TniQ
分子名称: ZINC ION, transposition protein TniQ
著者Wang, B, Xu, W, Yang, H.
登録日2019-12-28
公開日2020-02-19
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural basis of a Tn7-like transposase recruitment and DNA loading to CRISPR-Cas surveillance complex.
Cell Res., 30, 2020
6LNB
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CryoEM structure of Cascade-TniQ-dsDNA complex
分子名称: CRISPR RNA (60-MER), CRISPR-associated protein Cas6, CRISPR-associated protein Cas7, ...
著者Wang, B, Xu, W, Yang, H.
登録日2019-12-28
公開日2020-02-19
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Structural basis of a Tn7-like transposase recruitment and DNA loading to CRISPR-Cas surveillance complex.
Cell Res., 30, 2020
8C7B
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Slow cation movements within tetramolecular G-quadruplex: vacant cation binding sites in addition to all syn G-quartet
分子名称: DNA (5'-D(*GP*GP*GP*GP*CP*C)-3')
著者Wang, B, Zalar, M, Plavec, J, Sket, P.
登録日2023-01-14
公開日2023-11-22
実験手法SOLUTION NMR
主引用文献Insight into Tetramolecular DNA G-Quadruplexes Associated with ALS and FTLD: Cation Interactions and Formation of Higher-Ordered Structure.
Int J Mol Sci, 24, 2023
8C7A
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Slow cation movements within tetramolecular G-quadruplex: vacant cation binding sites in addition to all syn G-quartet
分子名称: DNA (5'-D(*GP*GP*GP*GP*CP*C)-3')
著者Wang, B, Zalar, M, Plavec, J, Sket, P.
登録日2023-01-14
公開日2023-11-22
実験手法SOLUTION NMR
主引用文献Insight into Tetramolecular DNA G-Quadruplexes Associated with ALS and FTLD: Cation Interactions and Formation of Higher-Ordered Structure.
Int J Mol Sci, 24, 2023
9GEF
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Experimental localization of metal-binding sites reveals the role of metal ions in the delafloxacin-stabilized Streptococcus pneumoniae topoisomerase IV DNA cleavage complex
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CHLORIDE ION, ...
著者Wang, B, Najmudin, S, Pan, X.-S, Mykhaylyk, V, Orr, C, Wagner, A, Govada, L, Chayen, N.E, Fisher, L.M, Sanderson, M.R.
登録日2024-08-08
公開日2024-10-16
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Experimental localization of metal-binding sites reveals the role of metal ions in type II DNA topoisomerases.
Proc.Natl.Acad.Sci.USA, 121, 2024
1NJ3
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Structure and Ubiquitin Interactions of the Conserved NZF Domain of Npl4
分子名称: NPL4, ZINC ION
著者Wang, B, Alam, S.L, Meyer, H.H, Payne, M, Stemmler, T.L, Davis, D.R, Sundquist, W.I.
登録日2002-12-30
公開日2003-04-22
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure and ubiquitin interactions of the conserved zinc finger domain of Npl4.
J.Biol.Chem., 278, 2003
5J62
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FMN-dependent Nitroreductase (CDR20291_0684) from Clostridium difficile R20291
分子名称: FLAVIN MONONUCLEOTIDE, GLYCEROL, PHOSPHATE ION, ...
著者Wang, B, Powell, S.M, Hessami, N, Najar, F.Z, Thomas, L.M, West, A.H, Karr, E.A, Richter-Addo, G.B.
登録日2016-04-04
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structures of two nitroreductases from hypervirulent Clostridium difficile and functionally related interactions with the antibiotic metronidazole.
Nitric Oxide, 60, 2016
5KD1
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Sperm whale myoglobin H64A with nitrosoamphetamine
分子名称: GLYCEROL, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Wang, B, Guan, Y, Thomas, L.M, Richter-Addo, G.B.
登録日2016-06-07
公開日2017-05-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Nitrosoamphetamine binding to myoglobin and hemoglobin: Crystal structure of the H64A myoglobin-nitrosoamphetamine adduct.
Nitric Oxide, 67, 2017
6P3W
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Crystal structure of the Cyclin A-CDK2-ORC1 complex
分子名称: Cyclin-A2, Cyclin-dependent kinase 2, ORC1 Peptide, ...
著者Wang, B, Song, J.
登録日2019-05-24
公開日2019-07-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Structural basis for the ORC1-Cyclin A association.
Protein Sci., 28, 2019
7BUJ
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mcGAS bound with pppGpG
分子名称: Cyclic GMP-AMP synthase, GUANOSINE-5'-MONOPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Wang, B, Su, X.D.
登録日2020-04-07
公開日2020-09-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Mn2+Directly Activates cGAS and Structural Analysis Suggests Mn2+Induces a Noncanonical Catalytic Synthesis of 2'3'-cGAMP.
Cell Rep, 32, 2020
7BUM
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mcGAS bound with pGpA
分子名称: ADENOSINE MONOPHOSPHATE, Cyclic GMP-AMP synthase, GUANOSINE-5'-MONOPHOSPHATE, ...
著者Wang, B, Su, X.D.
登録日2020-04-07
公開日2020-09-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.047 Å)
主引用文献Mn2+Directly Activates cGAS and Structural Analysis Suggests Mn2+Induces a Noncanonical Catalytic Synthesis of 2'3'-cGAMP.
Cell Rep, 32, 2020
7BUQ
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mcGAS bound with 23-cGAMP
分子名称: Cyclic GMP-AMP synthase, ZINC ION, cGAMP
著者Wang, B, Su, X.D.
登録日2020-04-07
公開日2020-09-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.091 Å)
主引用文献Mn2+Directly Activates cGAS and Structural Analysis Suggests Mn2+Induces a Noncanonical Catalytic Synthesis of 2'3'-cGAMP.
Cell Rep, 32, 2020
6LNC
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CryoEM structure of Cascade-TniQ complex
分子名称: CRISPR RNA (60-MER), CRISPR-associated protein Cas6, CRISPR-associated protein Cas7, ...
著者Wang, B, Xu, W, Yang, H.
登録日2019-12-28
公開日2020-02-19
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Structural basis of a Tn7-like transposase recruitment and DNA loading to CRISPR-Cas surveillance complex.
Cell Res., 30, 2020
6UX2
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Crystal structure of ZIKV RdRp in complex with STAT2
分子名称: Nonstructural Protein 5, SULFATE ION, Signal transducer and activator of transcription 2, ...
著者Wang, B, Song, J.
登録日2019-11-06
公開日2020-07-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Structural basis for STAT2 suppression by flavivirus NS5.
Nat.Struct.Mol.Biol., 27, 2020
7T1Y
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Structure of the Fbw7-Skp1-MycCdegron complex
分子名称: F-box/WD repeat-containing protein 7, Myc proto-oncogene protein C terminal degron, S-phase kinase-associated protein 1, ...
著者Wang, B, Rusnac, D.V, Clurman, B.E, Zheng, N.
登録日2021-12-02
公開日2022-02-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Two diphosphorylated degrons control c-Myc degradation by the Fbw7 tumor suppressor.
Sci Adv, 8, 2022
7T1Z
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Structure of the Fbw7-Skp1-MycNdegron complex
分子名称: F-box/WD repeat-containing protein 7, Myc proto-oncogene N terminal degron, S-phase kinase-associated protein 1, ...
著者Wang, B, Rusnac, D.V, Clurman, B.E, Zheng, N.
登録日2021-12-02
公開日2022-02-16
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Two diphosphorylated degrons control c-Myc degradation by the Fbw7 tumor suppressor.
Sci Adv, 8, 2022
6VWO
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Crystal structure of E. coli guanosine kinase
分子名称: ADENOSINE-5'-DIPHOSPHATE, GUANOSINE, Inosine-guanosine kinase, ...
著者Wang, B, Grant, R.A, Laub, M.T.
登録日2020-02-20
公開日2020-10-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献ppGpp Coordinates Nucleotide and Amino-Acid Synthesis in E. coli During Starvation.
Mol.Cell, 80, 2020
6VWP
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Crystal structure of E. coli guanosine kinase in complex with ppGpp
分子名称: GUANOSINE, GUANOSINE-5',3'-TETRAPHOSPHATE, Inosine-guanosine kinase, ...
著者Wang, B, Grant, R.A, Laub, M.T.
登録日2020-02-20
公開日2020-10-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献ppGpp Coordinates Nucleotide and Amino-Acid Synthesis in E. coli During Starvation.
Mol.Cell, 80, 2020
5B1Q
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Human herpesvirus 6B tegument protein U14
分子名称: GLYCEROL, U14 protein
著者Wang, B, Nishimura, M, Tang, H, Kawabata, A, Mahmoud, N.F, Khanlari, Z, Hamada, D, Tsuruta, H, Mori, Y.
登録日2015-12-11
公開日2016-04-20
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of Human Herpesvirus 6B Tegument Protein U14.
Plos Pathog., 12, 2016

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