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PDB: 1554 件

7WO1
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Discovery of SARS-CoV-2 3CLpro peptidomimetic inhibitors through H41-specific protein-ligand interactions
分子名称: 3C-like proteinase, N-[(2S)-3-methyl-1-[[(2S)-4-methyl-1-oxidanylidene-1-[[(2S)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepiperidin-3-yl]propan-2-yl]amino]pentan-2-yl]amino]-1-oxidanylidene-butan-2-yl]cyclohexanecarboxamide
著者Wang, Y, Ye, S.
登録日2022-01-20
公開日2022-04-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Discovery of SARS-CoV-2 3CL Pro Peptidomimetic Inhibitors through the Catalytic Dyad Histidine-Specific Protein-Ligand Interactions.
Int J Mol Sci, 23, 2022
7ENR
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BU of 7enr by Molmil
Crystal structure of cas and anti-cas protein complex
分子名称: AcrIIA14, CRISPR-associated endonuclease Cas9, sgRNA (98-MER)
著者Wang, Y, Li, X.
登録日2021-04-19
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (4.205 Å)
主引用文献Crystal structure of cas and anti-cas protein complex
To Be Published
7ENI
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BU of 7eni by Molmil
Crystal structure of cas and anti-cas protein complex
分子名称: AcrIIA13 protein, CRISPR-associated endonuclease Cas9, PHOSPHATE ION, ...
著者Wang, Y, Li, X.
登録日2021-04-17
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.632 Å)
主引用文献Crystal structure of cas and anti-cas protein complex
To Be Published
7ENH
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BU of 7enh by Molmil
Crystal structure of cas and anti-cas protein complex
分子名称: AcrIIA14 protein, CRISPR-associated endonuclease Cas9, NICKEL (II) ION
著者Wang, Y, Li, X.
登録日2021-04-17
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.097 Å)
主引用文献Crystal structure of cas and anti-cas protein complex
To Be Published
7ENM
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BU of 7enm by Molmil
Selenomethionine anti-Cas protein
分子名称: AcrIIA14 protein
著者Wang, Y, Li, X.
登録日2021-04-18
公開日2022-04-20
実験手法X-RAY DIFFRACTION (1.696 Å)
主引用文献Selenomethionine anti-Cas protein
To Be Published
7CNM
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BU of 7cnm by Molmil
YDX in complex with tubulin
分子名称: (2~{S},4~{S})-4-[[2-[(1~{R},3~{R})-1-acetyloxy-4-methyl-3-[[(2~{S},3~{S})-3-methyl-2-[[(2~{R})-1-methylpiperidin-2-yl]carbonylamino]pentanoyl]amino]pentyl]-1,3-thiazol-4-yl]carbonylamino]-5-cyclohexyl-2-methyl-pentanoic acid, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Wang, Y.X, Wu, C.Y.
登録日2020-08-02
公開日2021-08-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献The high-resolution X-ray structure of vinca-domain inhibitors of microtubules provides a rational approach for drug design.
Febs Lett., 595, 2021
2IVH
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BU of 2ivh by Molmil
Crystal structure of the nuclease domain of ColE7 (H545Q mutant) in complex with an 18-bp duplex DNA
分子名称: 5'-D(*GP*GP*AP*AP*TP*TP*CP*GP*AP*TP *CP*GP*AP*AP*TP*TP*CP*C)-3', COLCIN-E7, ZINC ION
著者Wang, Y.T, Yang, W.J, Li, C.L, Doudeva, L.G, Yuan, H.S.
登録日2006-06-13
公開日2007-01-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis for Sequence-Dependent DNA Cleavage by Nonspecific Endonucleases.
Nucleic Acids Res., 35, 2007
7DMZ
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GMPCPP microtubule complex
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
著者Wang, Y.X.
登録日2020-12-08
公開日2021-12-08
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献GMPCPP microtubule complex
To Be Published
7DN0
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AJ-GMPCPP-MT-non-seam
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
著者Wang, Y.X.
登録日2020-12-08
公開日2021-12-08
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献GMPCPP microtubule
To Be Published
7Y3E
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BU of 7y3e by Molmil
Cryo-EM structure of Arabidopsis thaliana SOS1 in an occluded state
分子名称: HEXADECANE, Sodium/hydrogen exchanger 7
著者Wang, Y, Zhao, Y, Gao, Y.
登録日2022-06-10
公開日2023-08-09
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Architecture and autoinhibitory mechanism of the plasma membrane Na + /H + antiporter SOS1 in Arabidopsis.
Nat Commun, 14, 2023
2IVK
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Crystal structure of the periplasmic endonuclease Vvn complexed with a 16-bp DNA
分子名称: 5'-D(*AP*AP*TP*TP*CP*GP*AP*TP*CP*GP *AP*AP*TP*TP*C)-3', 5'-D(*GP*AP*AP*TP*TP*CP*GP*AP*TP*CP *GP*AP*AP*TP*T)-3', 5'-D(*GP*AP*AP*TP*TP*CP*GP*AP*TP*CP *GP*AP*AP*TP*TP*C)-3', ...
著者Wang, Y.T, Yang, W.J, Li, C.L, Doudeva, L.G, Yuan, H.S.
登録日2006-06-14
公開日2007-01-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural Basis for Sequence-Dependent DNA Cleavage by Nonspecific Endonucleases.
Nucleic Acids Res., 35, 2007
2IL3
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BU of 2il3 by Molmil
Structures of an Insect Epsilon-class Glutathione S-transferase from the Malaria Vector Anopheles Gambiae: Evidence for High DDT-detoxifying Activity
分子名称: Epsilon-class Glutathione S-transferase
著者Wang, Y, Hemingway, J, Ranson, H, Meehan, E.J, Chen, L.
登録日2006-10-02
公開日2007-10-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of an insect epsilon class glutathione S-transferase from the malaria vector Anopheles gambiae provides an explanation for the high DDT-detoxifying activity
J.Struct.Biol., 164, 2008
2IMK
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Structures of an Insect Epsilon-class Glutathione S-transferase from the Malaria Vector Anopheles Gambiae: Evidence for High DDT-detoxifying Activity
分子名称: Epsilon-class Glutathione S-transferase, S-HEXYLGLUTATHIONE
著者Wang, Y, Hemingway, J, Ranson, H, Meehan, E.J, Chen, L.
登録日2006-10-02
公開日2007-10-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of an insect epsilon class glutathione S-transferase from the malaria vector Anopheles gambiae provides an explanation for the high DDT-detoxifying activity
J.Struct.Biol., 164, 2008
2JOW
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BU of 2jow by Molmil
Differences in the electrostatic surfaces of the type III secretion needle proteins
分子名称: Protein prgI
著者Wang, Y, Ouellette, A.N, Egan, C.W, De Guzman, R.N.
登録日2007-04-06
公開日2007-07-24
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Differences in the Electrostatic Surfaces of the Type III Secretion Needle Proteins PrgI, BsaL, and MxiH
J.Mol.Biol., 371, 2007
2K48
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BU of 2k48 by Molmil
NMR Structure of the N-terminal Coiled Coil Domain of the Andes Hantavirus Nucleocapsid Protein
分子名称: Nucleoprotein
著者Wang, Y, Boudreaux, D.M, Estrada, D.F, Egan, C.W, St Jeor, S.C, De Guzman, R.N.
登録日2008-05-30
公開日2008-08-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR Structure of the N-terminal Coiled Coil Domain of the Andes Hantavirus Nucleocapsid Protein.
J.Biol.Chem., 283, 2008
7WO3
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SARS-CoV-2 3CLpro
分子名称: (2S)-2-[[(2S)-2-[[(E)-3-(4-methoxyphenyl)prop-2-enoyl]amino]-3-methyl-butanoyl]amino]-4-methyl-N-[(2S)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepiperidin-3-yl]propan-2-yl]pentanamide, 3C-like proteinase
著者Wang, Y, Ye, S.
登録日2022-01-20
公開日2022-04-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Discovery of SARS-CoV-2 3CL Pro Peptidomimetic Inhibitors through the Catalytic Dyad Histidine-Specific Protein-Ligand Interactions.
Int J Mol Sci, 23, 2022
2M5I
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BU of 2m5i by Molmil
NMR structures of human apoptotic protein tBid in LPPG micelle
分子名称: BH3-interacting domain death agonist
著者Wang, Y, Tjandra, N.
登録日2013-02-25
公開日2013-11-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Insights of tBid, the Caspase-8-activated Bid, and Its BH3 Domain.
J.Biol.Chem., 288, 2013
7WO2
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SARS-CoV-2 3CLPro Peptidomimetic Inhibitor TPM5
分子名称: 3C-like proteinase, N-[(2S)-3-methyl-1-[[(2S)-4-methyl-1-oxidanylidene-1-[[(2S)-1-oxidanylidene-3-[(3S}-2-oxidanylidenepiperidin-3-yl]propan-2-yl]amino]pentan-2-yl]amino]-1-oxidanylidene-butan-2-yl]furan-2-carboxamide
著者Wang, Y, Ye, S.
登録日2022-01-20
公開日2022-12-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Discovery of SARS-CoV-2 3CL Pro Peptidomimetic Inhibitors through the Catalytic Dyad Histidine-Specific Protein-Ligand Interactions.
Int J Mol Sci, 23, 2022
2KKT
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BU of 2kkt by Molmil
Solution structure of the SCA7 domain of human Ataxin-7-L3 protein
分子名称: Ataxin-7-like protein 3, ZINC ION
著者Wang, Y, Atkinson, A.R, Bonnet, J, Romier, C, Kieffer, B.
登録日2009-06-29
公開日2010-06-16
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Histone deubiquitination by SAGA is modulated by an atypical zinc finger domain of Ataxin-7
To be Published
7WQB
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BU of 7wqb by Molmil
SARS-CoV-2 main protease mutant (P168A) in complex with MG-132
分子名称: 3C-like proteinase nsp5, MAGNESIUM ION, N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]-L-leucinamide
著者Wang, Y.C, Yang, C.S, Hou, M.H, Tsai, C.L, Chen, Y.
登録日2022-01-25
公開日2023-08-02
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献SARS-CoV-2 main protease mutant (P168A) in complex with MG-132
To Be Published
7CNN
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BU of 7cnn by Molmil
vinorelbine in complex with tubulin
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
著者Wang, Y.X, Wu, C.Y.
登録日2020-08-02
公開日2021-08-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The high-resolution X-ray structure of vinca-domain inhibitors of microtubules provides a rational approach for drug design.
Febs Lett., 595, 2021
4N74
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BU of 4n74 by Molmil
Crystal Structure of Outer Membrane Protein TamA beta-barrel Domain in E.coli
分子名称: Predicted outer membrane protein and surface antigen
著者Wang, Y.
登録日2013-10-14
公開日2014-10-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural Basis of BamA-mediate Outer Membrane Protein Biogenesis
To be Published
7WOH
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SARS-CoV-2 3CLpro
分子名称: (2S)-4-methyl-N-[(2S)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepiperidin-3-yl]propan-2-yl]-2-[[(2S)-3-phenyl-2-[[(E)-3-phenylprop-2-enoyl]amino]propanoyl]amino]pentanamide, 3C-like proteinase
著者Wang, Y, Ye, S.
登録日2022-01-21
公開日2022-04-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Discovery of SARS-CoV-2 3CL Pro Peptidomimetic Inhibitors through the Catalytic Dyad Histidine-Specific Protein-Ligand Interactions.
Int J Mol Sci, 23, 2022
7WQA
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SARS-CoV-2 main protease in complex with Z-VAD-FMK
分子名称: 3C-like proteinase, Z-VAD(OMe)-FMK
著者Wang, Y.C, Yang, C.S, Hou, M.H, Tsai, C.L, Chen, Y.
登録日2022-01-25
公開日2023-03-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献SARS-CoV-2 main protease in complex with Z-VAD-FMK
To Be Published
7WQ9
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Crystal structure of SARS-CoV-2 main protease in complex with Z-IETD-FMK
分子名称: 3C-like proteinase, Z-IETD-FMK
著者Wang, Y.C, Yang, C.S, Hou, M.H, Tsai, C.L, Chen, Y.
登録日2022-01-25
公開日2023-08-02
実験手法X-RAY DIFFRACTION (2.054 Å)
主引用文献Crystal structure of SARS-CoV-2 main protease in complex with Z-IETD-FMK
To Be Published

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件を2024-07-24に公開中

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