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PDB: 509 件

6WL8
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Cryo-EM of Form 2 peptide filament
分子名称: Form 2 peptide
著者Wang, F, Gnewou, O.M, Xu, C, Su, Z, Egelman, E.H, Conticello, V.P.
登録日2020-04-18
公開日2020-12-02
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural analysis of cross alpha-helical nanotubes provides insight into the designability of filamentous peptide nanomaterials.
Nat Commun, 12, 2021
6WL9
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BU of 6wl9 by Molmil
Cryo-EM of Form 2 like peptide filament, Form2a
分子名称: peptide Form2a
著者Wang, F, Beltran, L.C, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
登録日2020-04-18
公開日2020-12-02
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural analysis of cross alpha-helical nanotubes provides insight into the designability of filamentous peptide nanomaterials.
Nat Commun, 12, 2021
7TGG
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BU of 7tgg by Molmil
Cryo-EM structure of PilA-N and PilA-C from Geobacter sulfurreducens
分子名称: Geopilin domain 1 protein, Geopilin domain 2 protein
著者Wang, F, Mustafa, K, Chan, C.H, Joshi, K, Bond, D.R, Hochbaum, A.I, Egelman, E.H.
登録日2022-01-07
公開日2022-02-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Cryo-EM structure of an extracellular Geobacter OmcE cytochrome filament reveals tetrahaem packing.
Nat Microbiol, 7, 2022
6WKY
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Cryo-EM of Form 1 related peptide filament, 29-24-3
分子名称: peptide 29-24-3
著者Wang, F, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
登録日2020-04-17
公開日2020-12-02
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural analysis of cross alpha-helical nanotubes provides insight into the designability of filamentous peptide nanomaterials.
Nat Commun, 12, 2021
7TFS
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BU of 7tfs by Molmil
Cryo-EM of the OmcE nanowires from Geobacter sulfurreducens
分子名称: Cytochrome c, HEME C
著者Wang, F, Mustafa, K, Chan, C.H, Joshi, K, Hochbaum, A.I, Bond, D.R, Egelman, E.H.
登録日2022-01-07
公開日2022-05-04
最終更新日2022-11-16
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Cryo-EM structure of an extracellular Geobacter OmcE cytochrome filament reveals tetrahaem packing.
Nat Microbiol, 7, 2022
7TXJ
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Cryo-EM of AFV6
分子名称: DNA (5'-D(*TP*AP*TP*AP*TP*AP*TP*AP*TP*AP*TP*A)-3'), MCP1, MCP2
著者Wang, F, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
登録日2022-02-09
公開日2022-06-01
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM of AFV6
To Be Published
7TXI
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BU of 7txi by Molmil
Cryo-EM of A. pernix flagellum
分子名称: Probable flagellin 1
著者Wang, F, Cvirkaite-Krupovic, V, Baquero, D.P, Krupovic, M, Egelman, E.H.
登録日2022-02-09
公開日2022-06-01
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献The evolution of archaeal flagellar filaments.
Proc.Natl.Acad.Sci.USA, 120, 2023
2Z2G
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BU of 2z2g by Molmil
NMR Structure of the IQ-modified Dodecamer CTC[IQ]GGCGCCATC
分子名称: 3-METHYL-3H-IMIDAZO[4,5-F]QUINOLIN-2-AMINE, DNA (5'-D(*DCP*DTP*DCP*DGP*DGP*DCP*DGP*DCP*DCP*DAP*DTP*DC)-3'), DNA (5'-D(*DGP*DAP*DTP*DGP*DGP*DCP*DGP*DCP*DCP*DGP*DAP*DG)-3')
著者Wang, F, Elmquist, C.E, Stover, J.S, Rizzo, C.J, Stone, M.P.
登録日2007-05-22
公開日2007-10-02
最終更新日2023-11-29
実験手法SOLUTION NMR
主引用文献DNA sequence modulates the conformation of the food mutagen 2-amino-3-methylimidazo[4,5-f]quinoline in the recognition sequence of the NarI restriction enzyme
Biochemistry, 46, 2007
2Z2H
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NMR Structure of the IQ-modified Dodecamer CTCG[IQ]GCGCCATC
分子名称: 3-METHYL-3H-IMIDAZO[4,5-F]QUINOLIN-2-AMINE, DNA (5'-D(*DCP*DTP*DCP*DGP*DGP*DCP*DGP*DCP*DCP*DAP*DTP*DC)-3'), DNA (5'-D(*DGP*DAP*DTP*DGP*DGP*DCP*DGP*DCP*DCP*DGP*DAP*DG)-3')
著者Wang, F, Elmquist, C.E, Stover, J.S, Rizzo, C.J, Stone, M.P.
登録日2007-05-22
公開日2007-10-02
最終更新日2023-11-29
実験手法SOLUTION NMR
主引用文献DNA sequence modulates the conformation of the food mutagen 2-amino-3-methylimidazo[4,5-f]quinoline in the recognition sequence of the NarI restriction enzyme
Biochemistry, 46, 2007
6V7B
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BU of 6v7b by Molmil
Cryo-EM reconstruction of Pyrobaculum filamentous virus 2 (PFV2)
分子名称: A-DNA, Structural protein VP1, Structural protein VP2
著者Wang, F, Baquero, D.P, Su, Z, Prangishvili, D, Krupovic, M, Egelman, E.H.
登録日2019-12-08
公開日2020-04-01
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of a filamentous virus uncovers familial ties within the archaeal virosphere.
Virus Evol, 6, 2020
8DST
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BU of 8dst by Molmil
Cryo-EM of NBD-ffsy filaments (class 2)
分子名称: NBD-ffsy peptide
著者Wang, F, Guo, J, Xu, B, Egelman, E.H.
登録日2022-07-22
公開日2023-05-31
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cell spheroid creation by transcytotic intercellular gelation.
Nat Nanotechnol, 18, 2023
8FJ5
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BU of 8fj5 by Molmil
Structure of the Haloferax volcanii archaeal type IV pilus
分子名称: Pilin_N domain-containing protein
著者Wang, F, Kreutzberger, M.A, Baquero, D.P, Krupovic, M, Egelman, E.H.
登録日2022-12-19
公開日2023-06-28
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献The evolution of archaeal flagellar filaments.
Proc.Natl.Acad.Sci.USA, 120, 2023
6NAV
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BU of 6nav by Molmil
Cryo-EM reconstruction of Sulfolobus islandicus LAL14/1 Pilus
分子名称: M9UD72
著者Wang, F, Cvirkaite-Krupovic, V, Prangishvili, D, Krupovic, M, Egelman, E.H.
登録日2018-12-06
公開日2019-05-08
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献An extensively glycosylated archaeal pilus survives extreme conditions.
Nat Microbiol, 4, 2019
9B8S
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BU of 9b8s by Molmil
Human polymerase epsilon bound to PCNA and DNA in the nucleotide exchange state
分子名称: DNA (5'-D(P*AP*AP*AP*GP*TP*GP*AP*AP*AP*AP*AP*TP*CP*TP*AP*AP*AP*GP*CP*AP*TP*CP*AP*C)-3'), DNA (5'-D(P*GP*TP*GP*AP*TP*GP*CP*TP*TP*TP*AP*GP*AP*TP*TP*TP*TP*TP*C)-3'), DNA polymerase epsilon catalytic subunit A, ...
著者Wang, F, He, Q, Li, H.
登録日2024-03-31
公開日2024-09-11
最終更新日2024-10-02
実験手法ELECTRON MICROSCOPY (5.01 Å)
主引用文献Structures of the human leading strand Pol epsilon-PCNA holoenzyme.
Nat Commun, 15, 2024
9B8T
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BU of 9b8t by Molmil
Human polymerase epsilon bound to PCNA and DNA in the nucleotide bound state
分子名称: DNA polymerase epsilon catalytic subunit, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
著者Wang, F, He, Q, Li, H.
登録日2024-03-31
公開日2024-09-11
最終更新日2024-10-02
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Structures of the human leading strand Pol epsilon-PCNA holoenzyme.
Nat Commun, 15, 2024
7RX4
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BU of 7rx4 by Molmil
Cryo-EM reconstruction of AS2 nanotube (Form II like)
分子名称: AS2 peptide
著者Wang, F, Gnewou, O.M, Solemanifar, A, Xu, C, Egelman, E.H, Conticello, V.P.
登録日2021-08-21
公開日2021-09-08
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM of Helical Polymers.
Chem.Rev., 122, 2022
4ZAS
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BU of 4zas by Molmil
Crystal structure of sugar aminotransferase CalS13 from Micromonospora echinospora
分子名称: CalS13, SULFATE ION, THYMIDINE-5'-DIPHOSPHATE, ...
著者Wang, F, Singh, S, Miller, M.D, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2015-04-13
公開日2015-04-29
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Structure characterization of sugar aminotransferases CalS13 and WecE provides the basis for a unifying structural model for stereochemical outcome.
To Be Published
2HKC
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BU of 2hkc by Molmil
NMR Structure of the IQ-modified Dodecamer CTCGGC[IQ]GCCATC
分子名称: 3-METHYL-3H-IMIDAZO[4,5-F]QUINOLIN-2-AMINE, 5'-D(*CP*TP*CP*GP*GP*CP*GP*CP*CP*AP*TP*C)-3', 5'-D(*GP*AP*TP*GP*GP*CP*GP*CP*CP*GP*AP*G)-3'
著者Wang, F, DeMuro, N.E, Elmquist, C.E, Stover, J.S, Rizzo, C.J, Stone, M.P.
登録日2006-07-03
公開日2006-10-03
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Base-displaced intercalated structure of the food mutagen 2-amino-3-methylimidazo[4,5-f]quinoline in the recognition sequence of the NarI restriction enzyme, a hotspot for -2 bp deletions.
J.Am.Chem.Soc., 128, 2006
8HC0
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BU of 8hc0 by Molmil
Crystal structure of the extracellular domains of GPR110
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Adhesion G-protein coupled receptor F1, alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Wang, F.F, Song, G.J.
登録日2022-11-01
公開日2023-09-13
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal Structure of the Extracellular Domains of GPR110.
J.Mol.Biol., 435, 2023
8WGQ
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BU of 8wgq by Molmil
The Crystal Structure of L-asparaginase from Biortus.
分子名称: 1,2-ETHANEDIOL, GLYCEROL, L-asparaginase
著者Wang, F, Cheng, W, Lv, Z, Ju, C, Wang, J.
登録日2023-09-22
公開日2023-11-22
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献The Crystal Structure of L-asparaginase from Biortus.
To Be Published
8X70
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The Crystal Structure of IFI16 from Biortus.
分子名称: 1,2-ETHANEDIOL, BROMIDE ION, Gamma-interferon-inducible protein 16, ...
著者Wang, F, Cheng, W, Lv, Z, Meng, Q, Wang, J.
登録日2023-11-22
公開日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Crystal Structure of IFI16 from Biortus.
To Be Published
8XOX
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BU of 8xox by Molmil
The Crystal Structure of FAK2 from Biortus.
分子名称: 1,2-ETHANEDIOL, N-methyl-N-{3-[({2-[(2-oxo-2,3-dihydro-1H-indol-5-yl)amino]-5-(trifluoromethyl)pyrimidin-4-yl}amino)methyl]pyridin-2-yl}methanesulfonamide, Protein-tyrosine kinase 2-beta
著者Wang, F, Cheng, W, Lv, Z, Ju, C, Wang, J.
登録日2024-01-02
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Crystal Structure of FAK2 from Biortus.
To Be Published
5D6Y
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BU of 5d6y by Molmil
Crystal structure of double tudor domain of human lysine demethylase KDM4A complexed with histone H3K23me3
分子名称: Lysine-specific demethylase 4A, peptide H3K23me3 (19-28)
著者Wang, F, Su, Z, Miller, M.D, Denu, J.M, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2015-08-13
公開日2016-02-10
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.287 Å)
主引用文献Reader domain specificity and lysine demethylase-4 family function.
Nat Commun, 7, 2016
4ZAH
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BU of 4zah by Molmil
Crystal structure of sugar aminotransferase WecE with External Aldimine VII from Escherichia coli K-12
分子名称: [[(2R,3S,5R)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3R,4S,5R,6R)-6-methyl-5-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3,4-bis(oxidanyl)oxan-2-yl] hydrogen phosphate, dTDP-4-amino-4,6-dideoxygalactose transaminase
著者Wang, F, Singh, S, Cao, H, Xu, W, Miller, M.D, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2015-04-13
公開日2015-04-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Structural Basis for the Stereochemical Control of Amine Installation in Nucleotide Sugar Aminotransferases.
Acs Chem.Biol., 10, 2015
8XPN
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The Crystal Structure of USP8 from Biortus.
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Ubiquitin carboxyl-terminal hydrolase 8, ...
著者Wang, F, Cheng, W, Yuan, Z, Lin, D, Wang, J.
登録日2024-01-04
公開日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Crystal Structure of USP8 from Biortus.
To Be Published

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件を2024-10-30に公開中

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