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PDB: 1442 件

4DFG
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Crystal Structure of Wild-type HIV-1 Protease with Cyclopentyltetrahydro- furanyl Urethanes as P2-ligand, GRL-0249A
分子名称: CHLORIDE ION, Protease, SODIUM ION, ...
著者Wang, Y.-F, Agniswamy, J, Weber, I.T.
登録日2012-01-23
公開日2012-03-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Substituent effects on P2-cyclopentyltetrahydrofuranyl urethanes: Design, synthesis, and X-ray studies of potent HIV-1 protease inhibitors.
Bioorg.Med.Chem.Lett., 22, 2012
7XQA
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Orf1-glycine complex
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase
著者Wang, Y.L, Li, T.L.
登録日2022-05-07
公開日2023-05-31
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7XXC
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Orf1-glycine-glycylthricin complex
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ...
著者Wang, Y.L, Li, T.L.
登録日2022-05-29
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.989 Å)
主引用文献N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7XXM
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Orf1-glycine-4-aminobutylthricin complex
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ...
著者Wang, Y.L, Li, T.L.
登録日2022-05-30
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.119 Å)
主引用文献N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7XX0
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C281S glycylthricin complex
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ...
著者Wang, Y.L, Li, T.L.
登録日2022-05-27
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.199 Å)
主引用文献N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7XYL
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E426Q-glycine-glycylthricin complex
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ...
著者Wang, Y.L, Li, T.L.
登録日2022-06-01
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.099 Å)
主引用文献N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7XXD
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Orf1-sarcosine complex
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, N-formimidoyl fortimicin A synthase, SARCOSINE
著者Wang, Y.L, Li, T.L.
登録日2022-05-29
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.982 Å)
主引用文献N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7XXR
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Orf1 R342A-glycylthricin complex
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, N-formimidoyl fortimicin A synthase, [(2~{R},3~{R},4~{S},5~{R},6~{R})-6-[(~{E})-[(3~{a}~{S},7~{R},7~{a}~{S})-7-oxidanyl-4-oxidanylidene-3,3~{a},5,6,7,7~{a}-hexahydro-1~{H}-imidazo[4,5-c]pyridin-2-ylidene]amino]-5-(2-azanylethanoylamino)-2-(hydroxymethyl)-4-oxidanyl-oxan-3-yl] carbamate
著者Wang, Y.L, Li, T.L.
登録日2022-05-30
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7Y0X
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Orf1-glycine complex
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ...
著者Wang, Y.L, Li, T.L.
登録日2022-06-06
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7XXP
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BU of 7xxp by Molmil
F316A-glycine-streptothricin F complex
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ...
著者Wang, Y.L, Li, T.L.
登録日2022-05-30
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.052 Å)
主引用文献N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
5X6D
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BU of 5x6d by Molmil
Crystal structure of PrfA-DNA binary complex
分子名称: DNA (28-MER), DNA (29-MER), Listeriolysin positive regulatory factor A
著者Wang, Y, Feng, H, Zhu, Y.L, Gao, P.
登録日2017-02-21
公開日2017-04-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Structural insights into glutathione-mediated activation of the master regulator PrfA in Listeria monocytogenes
Protein Cell, 8, 2017
5X6E
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BU of 5x6e by Molmil
Crystal structure of PrfA-DNA binary complex
分子名称: DNA (28-MER), DNA (29-MER), GLUTATHIONE, ...
著者Wang, Y, Feng, H, Zhu, Y.L, Gao, P.
登録日2017-02-21
公開日2017-04-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Structural insights into glutathione-mediated activation of the master regulator PrfA in Listeria monocytogenes
Protein Cell, 8, 2017
8HNA
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BU of 8hna by Molmil
Crystal structure of N-terminal fragment (20-221aa) of human SCARF1
分子名称: Scavenger receptor class F member 1
著者Wang, Y, He, Y, Li, G.
登録日2022-12-07
公開日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of N-terminal of SCARF1 at 2.6 Angstroms resolution
To Be Published
8HN0
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BU of 8hn0 by Molmil
Crystal structure of N-terminal fragment (20-132aa) of human SCARF1
分子名称: Scavenger receptor class F member 1
著者Wang, Y, He, Y.
登録日2022-12-06
公開日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the f1 of SCARF1
To Be Published
7E2B
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BU of 7e2b by Molmil
GDPD mutant complex from Pyrococcus furiosus DSM 3638
分子名称: CHOLINE ION, Glycerophosphodiester phosphodiesterase, MAGNESIUM ION, ...
著者Wang, Y.H, Wang, J, Wang, F.H.
登録日2021-02-05
公開日2022-02-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Observation of the GPC production during hydrolysis of LPC by GDPD D60A from Pyrococcus furiosus DSM 3638
To Be Published
7E2A
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BU of 7e2a by Molmil
GDPD mutant from Pyrococcus furiosus DSM 3638
分子名称: Glycerophosphodiester phosphodiesterase
著者Wang, Y.H, Wang, J, Wang, F.H.
登録日2021-02-05
公開日2022-02-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Crystal structure of glycerophoshphodiester phospodiesterase D60A mutant from Pyrococcus furiosus DSM
To Be Published
7E04
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BU of 7e04 by Molmil
Crystal structure of Bomgl, a monoacylglycerol lipase from marine Bacillus sp.
分子名称: GLYCEROL, Lipase
著者Wang, Y.H, Wang, J, Lan, D.M.
登録日2021-01-27
公開日2022-02-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal structure of Bomgl, a monoacylglycerol lipase from marine Bacillus
To Be Published
8HY4
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BU of 8hy4 by Molmil
Crystal structure of human transthyretin variant A97S at pH 7.6
分子名称: Transthyretin
著者Wang, Y.S, Huang, C.H, Tzeng, S.R.
登録日2023-01-05
公開日2023-05-03
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献A molecular basis for tetramer destabilization and aggregation of transthyretin Ala97Ser.
Protein Sci., 32, 2023
7YPU
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BU of 7ypu by Molmil
OrfE-CoA-glycylthricin complex
分子名称: Acetyltransferase, COENZYME A, [(2~{R},3~{R},4~{S},5~{R},6~{R})-6-[(~{E})-[(3~{a}~{S},7~{R},7~{a}~{S})-7-oxidanyl-4-oxidanylidene-3,3~{a},5,6,7,7~{a}-hexahydro-1~{H}-imidazo[4,5-c]pyridin-2-ylidene]amino]-5-(2-azanylethanoylamino)-2-(hydroxymethyl)-4-oxidanyl-oxan-3-yl] carbamate
著者Wang, Y.L, Li, T.L.
登録日2022-08-04
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.357 Å)
主引用文献N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
5Y03
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BU of 5y03 by Molmil
Galectin-13/Placental Protein 13 variant R53H crystal structure
分子名称: Galactoside-binding soluble lectin 13
著者Wang, Y, Su, J.
登録日2017-07-14
公開日2018-01-31
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Galectin-13, a different prototype galectin, does not bind beta-galacto-sides and forms dimers via intermolecular disulfide bridges between Cys-136 and Cys-138.
Sci Rep, 8, 2018
7KQR
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BU of 7kqr by Molmil
A 1.89-A resolution substrate-bound crystal structure of heme-dependent tyrosine hydroxylase from S. sclerotialus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Heme-dependent L-tyrosine hydroxylase, ...
著者Wang, Y, Shin, I, Liu, A.
登録日2020-11-17
公開日2021-03-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Molecular Rationale for Partitioning between C-H and C-F Bond Activation in Heme-Dependent Tyrosine Hydroxylase.
J.Am.Chem.Soc., 143, 2021
7KQS
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A 1.68-A resolution 3-fluoro-L-tyrosine bound crystal structure of heme-dependent tyrosine hydroxylase
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-FLUOROTYROSINE, ...
著者Wang, Y, Liu, A.
登録日2020-11-17
公開日2021-03-31
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.677 Å)
主引用文献Molecular Rationale for Partitioning between C-H and C-F Bond Activation in Heme-Dependent Tyrosine Hydroxylase.
J.Am.Chem.Soc., 143, 2021
7KQU
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A 1.58-A resolution crystal structure of ferric-hydroperoxo intermediate of L-tyrosine hydroxylase in complex with 3-fluoro-L-tyrosine
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-FLUOROTYROSINE, ...
著者Wang, Y, Davis, I, Liu, A.
登録日2020-11-17
公開日2021-03-31
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.579 Å)
主引用文献Molecular Rationale for Partitioning between C-H and C-F Bond Activation in Heme-Dependent Tyrosine Hydroxylase.
J.Am.Chem.Soc., 143, 2021
7KQT
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A 1.84-A resolution crystal structure of heme-dependent L-tyrosine hydroxylase in complex with 3-fluoro-L-tyrosine and cyanide
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-FLUOROTYROSINE, CYANIDE ION, ...
著者Wang, Y, Liu, A.
登録日2020-11-17
公開日2021-03-31
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.835 Å)
主引用文献Molecular Rationale for Partitioning between C-H and C-F Bond Activation in Heme-Dependent Tyrosine Hydroxylase.
J.Am.Chem.Soc., 143, 2021
8IOG
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BU of 8iog by Molmil
Cryo-EM structure of porcine bc1 complex in isolated state
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, Complex III subunit 9, ...
著者Wang, Y.X, Dong, J.Q, Yang, G.F.
登録日2023-03-11
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Cryo-EM structure of porcine bc1 complex in isolated state
To Be Published

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件を2024-07-24に公開中

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