Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1173 results

4DWQ
DownloadVisualize
BU of 4dwq by Molmil
RNA ligase RtcB-GMP/Mn(2+) complex
Descriptor: GLYCEROL, GUANOSINE-5'-MONOPHOSPHATE, MALONATE ION, ...
Authors:Okada, C, Xia, S, Englert, M, Yao, M, Soll, D, Wang, J.
Deposit date:2012-02-26
Release date:2012-09-05
Last modified:2017-08-02
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural and mechanistic insights into guanylylation of RNA-splicing ligase RtcB joining RNA between 3'-terminal phosphate and 5'-OH.
Proc.Natl.Acad.Sci.USA, 109, 2012
4DTO
DownloadVisualize
BU of 4dto by Molmil
RB69 DNA Polymerase Ternary Complex with dCTP Opposite an Abasic Site and ddA/dT as the Penultimate Base-pair
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-02-21
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Contribution of Partial Charge Interactions and Base Stacking to the Efficiency of Primer Extension at and beyond Abasic Sites in DNA.
Biochemistry, 51, 2012
4DTR
DownloadVisualize
BU of 4dtr by Molmil
RB69 DNA Polymerase Ternary Complex with dATP Opposite an Abasic Site and ddC/dG as the Penultimate Base-pair
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-02-21
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Contribution of Partial Charge Interactions and Base Stacking to the Efficiency of Primer Extension at and beyond Abasic Sites in DNA.
Biochemistry, 51, 2012
6VZP
DownloadVisualize
BU of 6vzp by Molmil
HBV wild type capsid
Descriptor: Capsid protein
Authors:Zhao, Z, Wang, J, Zlotnick, A.
Deposit date:2020-02-28
Release date:2020-09-30
Last modified:2020-12-30
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The Integrity of the Intradimer Interface of the Hepatitis B Virus Capsid Protein Dimer Regulates Capsid Self-Assembly.
Acs Chem.Biol., 15, 2020
2KQ3
DownloadVisualize
BU of 2kq3 by Molmil
Solution structure of SNase140
Descriptor: Thermonuclease
Authors:Wang, M, Feng, Y, Yao, H, Wang, J.
Deposit date:2009-10-26
Release date:2010-05-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Importance of the C-Terminal Loop L137-S141 for the Folding and Folding Stability of Staphylococcal Nuclease
Biochemistry, 49, 2010
4FJI
DownloadVisualize
BU of 4fji by Molmil
RB69 DNA polymerase ternary complex with dcTP/dC
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-06-11
Release date:2012-12-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase.
J.Am.Chem.Soc., 135, 2013
4FJ9
DownloadVisualize
BU of 4fj9 by Molmil
RB69 DNA polymerase ternary complex with dTTP/dT
Descriptor: CALCIUM ION, DNA polymerase, DNA primer, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-06-11
Release date:2012-12-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase.
J.Am.Chem.Soc., 135, 2013
4FJX
DownloadVisualize
BU of 4fjx by Molmil
RB69 DNA polymerase ternary complex with dATP/dG
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-06-12
Release date:2012-12-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase.
J.Am.Chem.Soc., 135, 2013
6JVY
DownloadVisualize
BU of 6jvy by Molmil
Crystal structure of RBM38 in complex with single-stranded DNA
Descriptor: DNA (5'-D(*TP*GP*TP*GP*TP*GP*TP*GP*TP*GP*TP*G)-3'), RNA-binding protein 38, SULFATE ION
Authors:Qian, K, Li, M, Wang, J, Zhang, M, Wang, M.
Deposit date:2019-04-17
Release date:2020-01-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Structural basis for mRNA recognition by human RBM38.
Biochem.J., 477, 2020
2Q06
DownloadVisualize
BU of 2q06 by Molmil
Crystal structure of Influenza A Virus H5N1 Nucleoprotein
Descriptor: Nucleoprotein
Authors:Ng, A.K.L, Zhang, H, Tan, K, Wang, J, Shaw, P.C.
Deposit date:2007-05-21
Release date:2008-05-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of the influenza virus A H5N1 nucleoprotein: implications for RNA binding, oligomerization, and vaccine design.
Faseb J., 22, 2008
6C6F
DownloadVisualize
BU of 6c6f by Molmil
Structure of glycolipid aGSA[26,P5p] in complex with mouse CD1d
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, Beta-2-microglobulin, ...
Authors:Zajonc, D.M, Wang, J.
Deposit date:2018-01-18
Release date:2019-01-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structure-function analysis of sphingamides
To Be Published
4FJG
DownloadVisualize
BU of 4fjg by Molmil
RB69 DNA polymerase ternary complex with dATP/dC
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-06-11
Release date:2012-12-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase.
J.Am.Chem.Soc., 135, 2013
4FK0
DownloadVisualize
BU of 4fk0 by Molmil
RB69 DNA polymerase ternary complex with dCTP/dG
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-06-12
Release date:2012-12-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase.
J.Am.Chem.Soc., 135, 2013
4FJH
DownloadVisualize
BU of 4fjh by Molmil
RB69 DNA polymerase ternary complex with dGTP/dC
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-06-11
Release date:2012-12-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase.
J.Am.Chem.Soc., 135, 2013
4FR4
DownloadVisualize
BU of 4fr4 by Molmil
Crystal structure of human serine/threonine-protein kinase 32A (YANK1)
Descriptor: 1,2-ETHANEDIOL, STAUROSPORINE, Serine/threonine-protein kinase 32A
Authors:Chaikuad, A, Elkins, J.M, Krojer, T, Mahajan, P, Goubin, S, Szklarz, M, Tumber, A, Wang, J, Savitsky, P, Shrestha, B, Daga, N, Picaud, S, Fedorov, O, Allerston, C.K, Latwiel, S.V.A, Vollmar, M, Canning, P, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2012-06-26
Release date:2012-07-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structure of human serine/threonine-protein kinase 32A (YANK1)
To be Published
4FJJ
DownloadVisualize
BU of 4fjj by Molmil
RB69 DNA polymerase ternary complex with dTTP/dC
Descriptor: CALCIUM ION, DNA polymerase, DNA primer, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-06-11
Release date:2012-12-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase.
J.Am.Chem.Soc., 135, 2013
7E04
DownloadVisualize
BU of 7e04 by Molmil
Crystal structure of Bomgl, a monoacylglycerol lipase from marine Bacillus sp.
Descriptor: GLYCEROL, Lipase
Authors:Wang, Y.H, Wang, J, Lan, D.M.
Deposit date:2021-01-27
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of Bomgl, a monoacylglycerol lipase from marine Bacillus
To Be Published
4DTX
DownloadVisualize
BU of 4dtx by Molmil
RB69 DNA Polymerase Ternary Complex with dTTP Opposite an Abasic Site and ddC/dG as the Penultimate Base-pair
Descriptor: CALCIUM ION, DNA polymerase, DNA primer, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-02-21
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Contribution of Partial Charge Interactions and Base Stacking to the Efficiency of Primer Extension at and beyond Abasic Sites in DNA.
Biochemistry, 51, 2012
4ESV
DownloadVisualize
BU of 4esv by Molmil
A New Twist on the Translocation Mechanism of Helicases from the Structure of DnaB with its Substrates
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3', 5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3', ...
Authors:Itsathitphaisarn, O, Wing, R.A, Eliason, W.K, Wang, J, Steitz, T.A.
Deposit date:2012-04-23
Release date:2012-10-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The Hexameric Helicase DnaB Adopts a Nonplanar Conformation during Translocation.
Cell(Cambridge,Mass.), 151, 2012
4ELM
DownloadVisualize
BU of 4elm by Molmil
Crystal structure of the mouse CD1d-lysosulfatide-Hy19.3 TCR complex
Descriptor: (2S,3R,4E)-2-amino-3-hydroxyoctadec-4-en-1-yl 3-O-sulfo-beta-D-galactopyranoside, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Girardi, E, Maricic, I, Wang, J, Mac, T.T, Iyer, P, Kumar, V, Zajonc, D.M.
Deposit date:2012-04-11
Release date:2012-07-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:Type II natural killer T cells use features of both innate-like and conventional T cells to recognize sulfatide self antigens.
Nat.Immunol., 13, 2012
4FJL
DownloadVisualize
BU of 4fjl by Molmil
RB69 DNA polymerase ternary complex with dGTP/dA
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-06-11
Release date:2012-12-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase.
J.Am.Chem.Soc., 135, 2013
6KY4
DownloadVisualize
BU of 6ky4 by Molmil
Crystal structure of Sulfiredoxin from Arabidopsis thaliana
Descriptor: ADENOSINE-5'-DIPHOSPHATE, PHOSPHATE ION, Sulfiredoxin, ...
Authors:Liu, M, Wang, J, Li, X, Li, M, Sylvanno, M.J, Zhang, M, Wang, M.
Deposit date:2019-09-16
Release date:2019-10-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The crystal structure of sulfiredoxin from Arabidopsis thaliana revealed a more robust antioxidant mechanism in plants.
Biochem.Biophys.Res.Commun., 520, 2019
4FJ7
DownloadVisualize
BU of 4fj7 by Molmil
RB69 DNA polymerase ternary complex with dGTP/dT
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-06-11
Release date:2012-12-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase.
J.Am.Chem.Soc., 135, 2013
4FK4
DownloadVisualize
BU of 4fk4 by Molmil
RB69 DNA polymerase ternary complex with dGTP/dG
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-06-12
Release date:2012-12-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase.
J.Am.Chem.Soc., 135, 2013
4FJ8
DownloadVisualize
BU of 4fj8 by Molmil
RB69 DNA polymerase ternary complex with dCTP/dT
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-06-11
Release date:2012-12-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase.
J.Am.Chem.Soc., 135, 2013

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon