Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12929 results

4QWI
DownloadVisualize
BU of 4qwi by Molmil
yCP beta5-A49S-mutant in complex with carfilzomib
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Huber, E.M, Heinemeyer, W, Groll, M.
Deposit date:2014-07-16
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914.
Structure, 23, 2015
4D09
DownloadVisualize
BU of 4d09 by Molmil
PDE2a catalytic domain in complex with a brain penetrant inhibitor
Descriptor: CGMP-DEPENDENT 3', 5'-CYCLIC PHOSPHODIESTERASE, MAGNESIUM ION, ...
Authors:Buijnsters, P, Andres, J.I, DeAngelis, M, Langlois, X, Rombouts, F, Sanderson, W, Tresadern, G, Trabanco, A, VanHoof, G, VanRoosbroeck, Y.
Deposit date:2014-04-24
Release date:2014-08-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-Based Design of a Potent, Selective, and Brain Penetrating Pde2 Inhibitor with Demonstrated Target Engagement.
Acs Med.Chem.Lett., 5, 2014
4CX8
DownloadVisualize
BU of 4cx8 by Molmil
Monomeric pseudorabies virus protease pUL26N at 2.5 A resolution
Descriptor: PSEUDORABIES VIRUS PROTEASE
Authors:Zuehlsdorf, M, Werten, S, Palm, G.J, Hinrichs, W.
Deposit date:2014-04-04
Release date:2015-05-20
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Dimerization-Induced Allosteric Changes of the Oxyanion-Hole Loop Activate the Pseudorabies Virus Assemblin Pul26N, a Herpesvirus Serine Protease.
Plos Pathog., 11, 2015
1LRR
DownloadVisualize
BU of 1lrr by Molmil
CRYSTAL STRUCTURE OF E. COLI SEQA COMPLEXED WITH HEMIMETHYLATED DNA
Descriptor: 5'-D(*AP*GP*TP*CP*GP*(6MA)P*TP*CP*GP*GP*TP*G)-3', 5'-D(*CP*AP*CP*CP*GP*AP*TP*CP*GP*AP*CP*T)-3', SeqA protein
Authors:Guarne, A, Zhao, Q, Guirlando, R, Yang, W.
Deposit date:2002-05-15
Release date:2002-12-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Insights into negative modulation of E. coli replication initiation from the structure of SeqA-hemimethylated DNA complex
NAT.STRUCT.BIOL., 9, 2002
3O1S
DownloadVisualize
BU of 3o1s by Molmil
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase
Descriptor: Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), DNA (5'-D(*AP*GP*GP*TP*AP*AP*(MDQ)P*AP*CP*CP*GP*T)-3'), ...
Authors:Yi, C, Jia, G, Hou, G, Dai, Q, Zhang, W, Zheng, G, Jian, X, Yang, C.-G, Cui, Q, He, C.
Deposit date:2010-07-22
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010
3O1T
DownloadVisualize
BU of 3o1t by Molmil
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase
Descriptor: Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), DNA (5'-D(*AP*GP*GP*TP*AP*AP*(MDU)P*AP*CP*CP*GP*T)-3'), ...
Authors:Yi, C, Jia, G, Hou, G, Dai, Q, Zhang, W, Zheng, G, Jian, X, Yang, C.-G, Cui, Q, He, C.
Deposit date:2010-07-22
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010
3O77
DownloadVisualize
BU of 3o77 by Molmil
The structure of Ca2+ Sensor (Case-16)
Descriptor: CALCIUM ION, CHLORIDE ION, Myosin light chain kinase, ...
Authors:Leder, L, Stark, W, Freuler, F, Marsh, M, Meyerhofer, M, Stettler, T, Mayr, L.M, Britanova, O.V, Strukova, L.A, Chudakov, D.M.
Deposit date:2010-07-30
Release date:2010-09-29
Last modified:2017-06-21
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The structure of Ca2+ sensor Case16 reveals the mechanism of reaction to low Ca2+ concentrations
Sensors (Basel), 10, 2010
3O8N
DownloadVisualize
BU of 3o8n by Molmil
Structure of phosphofructokinase from rabbit skeletal muscle
Descriptor: 6-phosphofructokinase, muscle type, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Banaszak, K, Chang, S.H, Rypniewski, W.
Deposit date:2010-08-03
Release date:2011-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The Crystal Structures of Eukaryotic Phosphofructokinases from Baker's Yeast and Rabbit Skeletal Muscle.
J.Mol.Biol., 407, 2011
4D81
DownloadVisualize
BU of 4d81 by Molmil
Metallosphera sedula Vps4 crystal structure
Descriptor: AAA ATPase, central domain protein, ADENOSINE-5'-DIPHOSPHATE
Authors:Caillat, C, Macheboeuf, P, Wu, Y, McCarthy, A.A, Boeri-Erba, E, Effantin, G, Gottlinger, H.G, Weissenhorn, W, Renesto, P.
Deposit date:2014-12-02
Release date:2015-11-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Asymmetric Ring Structure of Vps4 Required for Escrt-III Disassembly.
Nat.Commun., 6, 2015
4DDF
DownloadVisualize
BU of 4ddf by Molmil
Computationally Designed Self-assembling Octahedral Cage protein, O333, Crystallized in space group P4
Descriptor: CHLORIDE ION, Propanediol utilization polyhedral body protein PduT, SULFATE ION
Authors:Sawaya, M.R, King, N.P, Sheffler, W, Baker, D, Yeates, T.O.
Deposit date:2012-01-18
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Computational design of self-assembling protein nanomaterials with atomic level accuracy.
Science, 336, 2012
4DE6
DownloadVisualize
BU of 4de6 by Molmil
Horse spleen apo-ferritin complex with arachidonic acid
Descriptor: ARACHIDONIC ACID, CADMIUM ION, Ferritin light chain, ...
Authors:Bu, W, Liu, R, Dmochowski, I.J, Loll, P.J, Eckenhoff, R.G.
Deposit date:2012-01-19
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Ferritin couples iron and fatty acid metabolism.
Faseb J., 26, 2012
3NX1
DownloadVisualize
BU of 3nx1 by Molmil
Crystal structure of Enterobacter sp. Px6-4 Ferulic Acid Decarboxylase
Descriptor: Ferulic acid decarboxylase
Authors:Gu, W, Yang, J.K, Lou, Z.Y, Meng, Z.H, Zhang, K.-Q.
Deposit date:2010-07-12
Release date:2011-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis of Enzymatic Activity for the Ferulic Acid Decarboxylase (FADase) from Enterobacter sp. Px6-4
Plos One, 6, 2011
4DFM
DownloadVisualize
BU of 4dfm by Molmil
Crystal structure of the large fragment of DNA polymerase I from Thermus aquaticus in ternary complex with 5-(aminopentinyl)-2-dCTP
Descriptor: 1,2-ETHANEDIOL, 5'-d(AAAGCGCGCCGTGGTC)-3', 5'-d(GACCACGGCGC ddG)-3', ...
Authors:Bergen, K, Steck, A, Struett, S, Baccaro, A, Welte, W, Diederichs, K, Marx, A.
Deposit date:2012-01-24
Release date:2012-05-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.886 Å)
Cite:Structures of KlenTaq DNA Polymerase Caught While Incorporating C5-Modified Pyrimidine and C7-Modified 7-Deazapurine Nucleoside Triphosphates.
J.Am.Chem.Soc., 134, 2012
1LU9
DownloadVisualize
BU of 1lu9 by Molmil
Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1
Descriptor: Methylene Tetrahydromethanopterin Dehydrogenase
Authors:Ermler, U, Hagemeier, C.H, Roth, A, Demmer, U, Grabarse, W, Warkentin, E, Vorholt, J.A.
Deposit date:2002-05-22
Release date:2002-09-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of methylene-tetrahydromethanopterin dehydrogenase from methylobacterium extorquens AM1.
Structure, 10, 2002
1LUA
DownloadVisualize
BU of 1lua by Molmil
Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1 complexed with NADP
Descriptor: Methylene Tetrahydromethanopterin Dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Ermler, U, Hagemeier, C.H, Roth, A, Demmer, U, Grabarse, W, Warkentin, E, Vorholt, J.A.
Deposit date:2002-05-22
Release date:2002-09-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of methylene-tetrahydromethanopterin dehydrogenase from methylobacterium extorquens AM1.
Structure, 10, 2002
4DZD
DownloadVisualize
BU of 4dzd by Molmil
Crystal structure of the CRISPR-associated protein Cas6e from Escherichia coli str. K-12
Descriptor: GLYCEROL, Uncharacterized protein ygcH
Authors:Wei, J, Huang, G, Wang, Y, Gong, W.
Deposit date:2012-03-01
Release date:2013-03-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Crystal Structure of endoribonuclease Cas6e from Escherichia coli
To be Published
1LTO
DownloadVisualize
BU of 1lto by Molmil
Human alpha1-tryptase
Descriptor: alpha tryptase I
Authors:Marquardt, U, Zettl, F, Huber, R, Bode, W, Sommerhoff, C.P.
Deposit date:2002-05-20
Release date:2003-05-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Crystal Structure of Human alpha1-Tryptase Reveals a Blocked Substrate-binding Region
J.MOL.BIOL., 321, 2002
4DL7
DownloadVisualize
BU of 4dl7 by Molmil
Human DNA polymerase eta fails to extend primer 2 nucleotide after cisplatin crosslink (Pt-GG4).
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, Cisplatin, DNA (5'-D(*TP*AP*CP*TP*CP*GP*GP*TP*CP*AP*CP*T)-3'), ...
Authors:Zhao, Y, Biertumpfel, C, Gregory, M, Hua, Y, Hanaoka, F, Yang, W.
Deposit date:2012-02-05
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural Basis for Chemoresistance to Cisplatin Mediated by DNA Polymerase eta
Proc.Natl.Acad.Sci.USA, 109, 2012
1LP3
DownloadVisualize
BU of 1lp3 by Molmil
The Atomic Structure of Adeno-Associated Virus (AAV-2), a Vector for Human Gene Therapy
Descriptor: AAV-2 capsid protein
Authors:Xie, Q, Bu, W, Bhatia, S, Hare, J, Somasundaram, T, Azzi, A, Chapman, M.S.
Deposit date:2002-05-07
Release date:2002-08-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:The atomic structure of adeno-associated virus (AAV-2), a vector for human gene therapy.
Proc.Natl.Acad.Sci.USA, 99, 2002
3RZH
DownloadVisualize
BU of 3rzh by Molmil
Duplex Interrogation by a Direct DNA Repair Protein in the Search of Damage
Descriptor: 5'-D(*CP*TP*GP*TP*CP*TP*(ME6)P*AP*CP*TP*GP*CP*G)-3', 5'-D(*TP*CP*GP*CP*AP*GP*TP*GP*AP*GP*AP*CP*A)-3', Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, ...
Authors:Yi, C, Chen, B, Qi, B, Zhang, W, Jia, G, Zhang, L, Li, C, Dinner, A, Yang, C, He, C.
Deposit date:2011-05-11
Release date:2012-06-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Duplex interrogation by a direct DNA repair protein in search of base damage
Nat.Struct.Mol.Biol., 19, 2012
1LS9
DownloadVisualize
BU of 1ls9 by Molmil
Structure of the Cytochrome c6 from the Green Alga Cladophora glomerata
Descriptor: CYTOCHROME C6, PROTOPORPHYRIN IX CONTAINING FE
Authors:Carpentier, W.
Deposit date:2002-05-17
Release date:2002-12-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Basis for the Molecular Properties of Cytochrome C(6)
Biochemistry, 41, 2002
4DFP
DownloadVisualize
BU of 4dfp by Molmil
Crystal structure of the large fragment of DNA Polymerase I from Thermus aqauticus in a ternary complex with 7-(aminopentinyl)-7-deaza-dGTP
Descriptor: 1,2-ETHANEDIOL, 2-amino-5-(5-aminopent-1-yn-1-yl)-7-{2-deoxy-5-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-erythro-pentofuranosyl}-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, 5'-d(AAACGGCGCCGTGGTC)-3', ...
Authors:Bergen, K, Steck, A, Struett, S, Baccaro, A, Welte, W, Diederichs, K, Marx, A.
Deposit date:2012-01-24
Release date:2012-05-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of KlenTaq DNA Polymerase Caught While Incorporating C5-Modified Pyrimidine and C7-Modified 7-Deazapurine Nucleoside Triphosphates.
J.Am.Chem.Soc., 134, 2012
3RY6
DownloadVisualize
BU of 3ry6 by Molmil
Complex of fcgammariia (CD32) and the FC of human IGG1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ig gamma-1 chain C region, ...
Authors:Ramsland, P.A, Farrugia, W, Scott, A.M, Hogarth, P.M.
Deposit date:2011-05-11
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Structural Basis for Fc{gamma}RIIa Recognition of Human IgG and Formation of Inflammatory Signaling Complexes.
J.Immunol., 187, 2011
3RVT
DownloadVisualize
BU of 3rvt by Molmil
Structure of 4C1 Fab in P212121 space group
Descriptor: Fab fragment of 4C1 antibody - heavy chain, Fab fragment of 4C1 antibody - light chain
Authors:Chruszcz, M, Vailes, L.D, Chapman, M.D, Pomes, A, Minor, W.
Deposit date:2011-05-06
Release date:2012-01-11
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Molecular determinants for antibody binding on group 1 house dust mite allergens.
J.Biol.Chem., 287, 2012
3RY4
DownloadVisualize
BU of 3ry4 by Molmil
1.5 Angstrom resolution structure of glycosylated fcgammariia (low-responder polymorphism)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Low affinity immunoglobulin gamma Fc region receptor II-a
Authors:Ramsland, P.A, Farrugia, W, Hogarth, P.M.
Deposit date:2011-05-11
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Basis for Fc{gamma}RIIa Recognition of Human IgG and Formation of Inflammatory Signaling Complexes.
J.Immunol., 187, 2011

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon