Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12920 results

3IZJ
DownloadVisualize
BU of 3izj by Molmil
Mm-cpn rls with ATP and AlFx
Descriptor: Chaperonin
Authors:Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
Deposit date:2010-10-29
Release date:2011-02-02
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3J0G
DownloadVisualize
BU of 3j0g by Molmil
Homology model of E3 protein of Venezuelan Equine Encephalitis Virus TC-83 strain fitted with a cryo-EM map
Descriptor: E3 protein
Authors:Zhang, R, Hryc, C.F, Chiu, W.
Deposit date:2011-07-21
Release date:2011-08-24
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:4.4 angstrom cryo-EM structure of an enveloped alphavirus Venezuelan equine encephalitis virus.
Embo J., 30, 2011
1CVI
DownloadVisualize
BU of 1cvi by Molmil
CRYSTAL STRUCTURE OF HUMAN PROSTATIC ACID PHOSPHATASE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCINE, ...
Authors:Jakob, C.G, Lewinski, K, Kuciel, R, Ostrowski, W, Lebioda, L.
Deposit date:1999-08-23
Release date:1999-08-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of human prostatic acid phosphatase .
Prostate, 42, 2000
4YVD
DownloadVisualize
BU of 4yvd by Molmil
Crytsal structure of human Pleiotropic Regulator 1 (PRL1)
Descriptor: CHLORIDE ION, Pleiotropic regulator 1, SODIUM ION, ...
Authors:Dong, A, Zeng, H, Xu, C, Tempel, W, Li, Y, He, H, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Min, J, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2015-03-19
Release date:2015-04-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crytsal structure of human Pleiotropic Regulator 1 (PRL1).
to be published
2VSI
DownloadVisualize
BU of 2vsi by Molmil
Synthesis of CDP-activated ribitol for teichoic acid precursors in Streptococcus pneumoniae
Descriptor: 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE, 4-AMINO-1-{5-O-[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]-ALPHA-D-ARABINOFURANOSYL}PYRIMIDIN-2(1H)-ONE, CALCIUM ION
Authors:Baur, S, Marles-Wright, J, Buckenmaier, S, Lewis, R.J, Vollmer, W.
Deposit date:2008-04-23
Release date:2008-12-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Synthesis of Cdp-Activated Ribitol for Teichoic Acid Precursors in Streptococcus Pneumoniae.
J.Bacteriol., 191, 2009
3G70
DownloadVisualize
BU of 3g70 by Molmil
Design and Preparation of Potent, Non-Peptidic, Bioavailable Renin Inhibitors
Descriptor: (1R,5S)-7-{4-[3-(2-chloro-3,6-difluorophenoxy)propyl]phenyl}-N-cyclopropyl-N-(2,3-dichlorobenzyl)-3,9-diazabicyclo[3.3.1]non-6-ene-6-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
Authors:Bezencon, O, Bur, D, Prade, L, Weller, T, Boss, C, Fischli, W.
Deposit date:2009-02-09
Release date:2009-06-30
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design and Preparation of Potent, Nonpeptidic, Bioavailable Renin Inhibitors
J.Med.Chem., 52, 2009
1DMK
DownloadVisualize
BU of 1dmk by Molmil
BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH 4-AMINO-6-PHENYL-TETRAHYDROPTERIDINE
Descriptor: 2,4-DIAMINO-6-PHENYL-5,6,7,8,-TETRAHYDROPTERIDINE, ACETATE ION, CACODYLATE ION, ...
Authors:Kotsonis, P, Frohlich, L.G, Raman, C.S, Li, H, Berg, M, Gerwig, R, Groehn, V, Kang, Y, Al-Masoudi, N, Taghavi-Moghadam, S, Mohr, D, Munch, U, Schnabel, J, Martasek, P, Masters, B.S, Strobel, H, Poulos, T, Matter, H, Pfleiderer, W, Schmidt, H.H.
Deposit date:1999-12-14
Release date:2000-12-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for pterin antagonism in nitric-oxide synthase. Development of novel 4-oxo-pteridine antagonists of (6R)-5,6,7,8-tetrahydrobiopterin
J.Biol.Chem., 276, 2001
6IO9
DownloadVisualize
BU of 6io9 by Molmil
The structure of apo-UdgX
Descriptor: IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein, SULFATE ION
Authors:Xie, W, Tu, J.
Deposit date:2018-10-29
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Suicide inactivation of the uracil DNA glycosylase UdgX by covalent complex formation.
Nat.Chem.Biol., 15, 2019
6IOB
DownloadVisualize
BU of 6iob by Molmil
The structure of the H109A mutant of UdgX in complex with uracil
Descriptor: IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein, URACIL
Authors:Xie, W, Tu, J.
Deposit date:2018-10-29
Release date:2019-07-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Suicide inactivation of the uracil DNA glycosylase UdgX by covalent complex formation.
Nat.Chem.Biol., 15, 2019
1YG2
DownloadVisualize
BU of 1yg2 by Molmil
Structure of the Vibrio cholerae virulence activator AphA
Descriptor: gene activator AphA
Authors:De Silva, R.S, Kovacikova, G, Lin, W, Taylor, R.T, Skorupski, K, Kull, F.J.
Deposit date:2005-01-04
Release date:2005-01-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the virulence gene activator AphA from Vibrio cholerae reveals it is a novel member of the winged helix transcription factor superfamily
J.Biol.Chem., 280, 2005
4WW9
DownloadVisualize
BU of 4ww9 by Molmil
Crystal structure of binary complex Bud32-Cgi121 in complex with ADP
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, EKC/KEOPS complex subunit BUD32, ...
Authors:Zhang, W, Van Tilbeurgh, H.
Deposit date:2014-11-10
Release date:2015-03-18
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.951 Å)
Cite:Crystal structures of the Gon7/Pcc1 and Bud32/Cgi121 complexes provide a model for the complete yeast KEOPS complex.
Nucleic Acids Res., 43, 2015
3GBJ
DownloadVisualize
BU of 3gbj by Molmil
Crystal structure of the motor domain of kinesin KIF13B bound with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, KIF13B protein, MAGNESIUM ION, ...
Authors:Tong, Y, Shen, L, Shen, Y, Tempel, W, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2009-02-19
Release date:2009-03-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Crystal structure of the motor domain of kinesin KIF13B bound with ADP
To be Published
4WYU
DownloadVisualize
BU of 4wyu by Molmil
Crystal Structure of Scribble PDZ34 tandem in complex with its target peptide
Descriptor: IODIDE ION, Protein scribble homolog, peptide SER-TRP-PHE-GLN-THR-ASP-LEU
Authors:Ren, J.Q, Pei, H.H, Feng, W.
Deposit date:2014-11-18
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Interdomain interface-mediated target recognition by the Scribble PDZ34 supramodule.
Biochem.J., 468, 2015
7S9E
DownloadVisualize
BU of 7s9e by Molmil
Cryo-EM Structure of dolphin Prestin: Inhibited II (Sulfate +Salicylate) state
Descriptor: 2-HYDROXYBENZOIC ACID, Prestin
Authors:Bavi, N, Clark, M.D, Contreras, G.F, Shen, R, Reddy, B.G, Milewski, W, Perozo, E.
Deposit date:2021-09-20
Release date:2021-11-03
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:The conformational cycle of prestin underlies outer-hair cell electromotility.
Nature, 600, 2021
7S8X
DownloadVisualize
BU of 7s8x by Molmil
Cryo-EM Structure of dolphin Prestin: Sensor Up (compact) state
Descriptor: Prestin
Authors:Bavi, N, Clark, M.D, Contreras, G.F, Shen, R, Reddy, B.G, Milewski, W, Perozo, E.
Deposit date:2021-09-20
Release date:2021-11-03
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The conformational cycle of prestin underlies outer-hair cell electromotility.
Nature, 600, 2021
7S9C
DownloadVisualize
BU of 7s9c by Molmil
Cryo-EM Structure of dolphin Prestin: Sensor Down II (Expanded II) state
Descriptor: Prestin
Authors:Bavi, N, Clark, M.D, Contreras, G.F, Shen, R, Reddy, B.G, Milewski, W, Perozo, E.
Deposit date:2021-09-20
Release date:2021-11-03
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:The conformational cycle of prestin underlies outer-hair cell electromotility.
Nature, 600, 2021
7S9D
DownloadVisualize
BU of 7s9d by Molmil
Cryo-EM Structure of dolphin Prestin: Intermediate state
Descriptor: Prestin
Authors:Bavi, N, Clark, M.D, Contreras, G.F, Shen, R, Reddy, B.G, Milewski, W, Perozo, E.
Deposit date:2021-09-20
Release date:2021-11-03
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:The conformational cycle of prestin underlies outer-hair cell electromotility.
Nature, 600, 2021
4GGC
DownloadVisualize
BU of 4ggc by Molmil
Structural Analysis of Human Cdc20 Supports Multi-site Degron Recognition by APC/C
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Cell division cycle protein 20 homolog
Authors:Luo, X, Tian, W, Tomchick, D.R.
Deposit date:2012-08-06
Release date:2012-11-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural analysis of human Cdc20 supports multisite degron recognition by APC/C.
Proc.Natl.Acad.Sci.USA, 109, 2012
1DP9
DownloadVisualize
BU of 1dp9 by Molmil
CRYSTAL STRUCTURE OF IMIDAZOLE-BOUND FIXL HEME DOMAIN
Descriptor: FIXL PROTEIN, IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gong, W, Hao, B, Chan, M.K.
Deposit date:1999-12-24
Release date:2000-12-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:New mechanistic insights from structural studies of the oxygen-sensing domain of Bradyrhizobium japonicum FixL.
Biochemistry, 39, 2000
2RRT
DownloadVisualize
BU of 2rrt by Molmil
Solution structure of Magnesium-bound form of calmodulin C-domain E104D/E140D mutant
Descriptor: Calmodulin
Authors:Ohashi, W, Hirota, H, Yamazaki, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-04-27
Release date:2011-05-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure and fluctuation of the Mg(2+)-bound form of calmodulin C-terminal domain
Protein Sci., 20, 2011
4X3X
DownloadVisualize
BU of 4x3x by Molmil
The crystal structure of Arc C-lobe
Descriptor: Activity-regulated cytoskeleton-associated protein
Authors:Zhang, W, Ward, M, Leahy, D, Worley, P.
Deposit date:2014-12-01
Release date:2015-06-03
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of arc binding to synaptic proteins: implications for cognitive disease.
Neuron, 86, 2015
7S9A
DownloadVisualize
BU of 7s9a by Molmil
Cryo-EM Structure of dolphin Prestin: Inhibited I (Chloride + Salicylate)
Descriptor: 2-HYDROXYBENZOIC ACID, Prestin
Authors:Bavi, N, Clark, M.D, Contreras, G.F, Shen, R, Reddy, B.G, Milewski, W, Perozo, E.
Deposit date:2021-09-20
Release date:2021-11-03
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The conformational cycle of prestin underlies outer-hair cell electromotility.
Nature, 600, 2021
7S9B
DownloadVisualize
BU of 7s9b by Molmil
Cryo-EM Structure of dolphin Prestin: Sensor Down I (Expanded) state
Descriptor: Prestin
Authors:Bavi, N, Clark, M.D, Contreras, G.F, Shen, R, Reddy, B.G, Milewski, W, Perozo, E.
Deposit date:2021-09-20
Release date:2021-11-03
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:The conformational cycle of prestin underlies outer-hair cell electromotility.
Nature, 600, 2021
1Y4K
DownloadVisualize
BU of 1y4k by Molmil
Lipoxygenase-1 (Soybean) at 100K, N694G Mutant
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, FE (II) ION, ...
Authors:Chruszcz, M, Segraves, E, Holman, T.R, Minor, W.
Deposit date:2004-12-01
Release date:2005-12-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Kinetic, spectroscopic, and structural investigations of the soybean lipoxygenase-1 first-coordination sphere mutant, Asn694Gly.
Biochemistry, 45, 2006
1YFD
DownloadVisualize
BU of 1yfd by Molmil
Crystal structure of the Y122H mutant of ribonucleotide reductase R2 protein from E. coli
Descriptor: MERCURY (II) ION, MU-OXO-DIIRON, Ribonucleoside-diphosphate reductase 1 beta chain
Authors:Kolberg, M, Logan, D.T, Bleifuss, G, Poetsch, S, Sjoeberg, B.M, Graeslund, A, Lubitz, W, Lassmann, G, Lendzian, F.
Deposit date:2004-12-31
Release date:2005-02-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A new tyrosyl radical on Phe208 as ligand to the diiron center in Escherichia coli ribonucleotide reductase, mutant R2-Y122H. Combined x-ray diffraction and EPR/ENDOR studies
J.Biol.Chem., 280, 2005

223166

數據於2024-07-31公開中

PDB statisticsPDBj update infoContact PDBjnumon