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PDB: 12920 件

2AHP
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GCN4 leucine zipper, mutation of Lys15 to epsilon-azido-Lys
分子名称: General control protein GCN4
著者Horne, W.S, Ghadiri, M.R.
登録日2005-07-28
公開日2006-08-01
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献GCN4 leucine zipper, mutation of Lys15 to epsilon-azido-Lys
To be Published
5GSV
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BU of 5gsv by Molmil
Mouse MHC class I H-2Kd with a MERS-CoV-derived peptide 142-5
分子名称: 10-mer peptide from Spike protein, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ...
著者Liu, K, Chai, Y, Qi, J, Tan, W, Liu, W.J, Gao, G.F.
登録日2016-08-17
公開日2017-04-26
実験手法X-RAY DIFFRACTION (1.996 Å)
主引用文献Protective T Cell Responses Featured by Concordant Recognition of Middle East Respiratory Syndrome Coronavirus-Derived CD8+ T Cell Epitopes and Host MHC.
J. Immunol., 198, 2017
2B91
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BU of 2b91 by Molmil
Crystal structure of the interleukin-4 variant F82DR85A
分子名称: Interleukin-4, SULFATE ION
著者Kraich, M, Klein, M, Patino, E, Harrer, H, Sebald, W, Mueller, T.D.
登録日2005-10-10
公開日2006-05-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A modular interface of IL-4 allows for scalable affinity without affecting specificity for the IL-4 receptor
Bmc Biol., 4, 2006
5GTT
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Crystal structure of C. perfringens iota-like enterotoxin CPILE-a
分子名称: 1,2-ETHANEDIOL, Binary enterotoxin of Clostridium perfringens component a
著者Toniti, W, Yoshida, T, Tsurumura, T, Irikura, D, Tsuge, H.
登録日2016-08-23
公開日2017-03-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.011 Å)
主引用文献Crystal structure and structure-based mutagenesis of actin-specific ADP-ribosylating toxin CPILE-a as novel enterotoxin
PLoS ONE, 12, 2017
5TX7
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BU of 5tx7 by Molmil
Crystal structure of D-isomer specific 2-hydroxyacid dehydrogenase from Desulfovibrio vulgaris
分子名称: D-isomer specific 2-hydroxyacid dehydrogenase family protein, DI(HYDROXYETHYL)ETHER, TRIETHYLENE GLYCOL
著者Czub, M.P, Shabalin, I.G, Gasiorowska, O.A, Handing, K.B, Kutner, J, Cymborowski, M.T, Hennig, P.M, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2016-11-15
公開日2016-12-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Crystal structure of D-isomer specific 2-hydroxyacid dehydrogenase from Desulfovibrio vulgaris
to be published
3PHY
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BU of 3phy by Molmil
PHOTOACTIVE YELLOW PROTEIN, DARK STATE (UNBLEACHED), SOLUTION STRUCTURE, NMR, 26 STRUCTURES
分子名称: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
著者Dux, P, Rubinstenn, G, Vuister, G.W, Boelens, R, Mulder, F.A.A, Hard, K, Hoff, W.D, Kroon, A, Crielaard, W, Hellingwerf, K.J, Kaptein, R.
登録日1998-02-06
公開日1998-05-27
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Solution structure and backbone dynamics of the photoactive yellow protein.
Biochemistry, 37, 1998
2G6I
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BU of 2g6i by Molmil
Structure of rat nNOS heme domain (BH2-bound) in the reduced form
分子名称: 7,8-DIHYDROBIOPTERIN, ACETATE ION, ARGININE, ...
著者Li, H, Igarashi, J, Jamal, J, Yang, W, Poulos, T.L.
登録日2006-02-24
公開日2006-08-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural studies of constitutive nitric oxide synthases with diatomic ligands bound.
J.Biol.Inorg.Chem., 11, 2006
2B8X
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Crystal structure of the interleukin-4 variant F82D
分子名称: Interleukin-4, SULFATE ION
著者Kraich, M, Klein, M, Patino, E, Harrer, H, Sebald, W, Mueller, T.D.
登録日2005-10-10
公開日2006-05-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A modular interface of IL-4 allows for scalable affinity without affecting specificity for the IL-4 receptor
Bmc Biol., 4, 2006
5GX8
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BU of 5gx8 by Molmil
Crystal structure of solute-binding protein related to glycosaminoglycans
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, D(-)-TARTARIC ACID, ...
著者Oiki, S, Mikami, B, Murata, K, Hashimoto, W.
登録日2016-09-15
公開日2017-07-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.778 Å)
主引用文献A bacterial ABC transporter enables import of mammalian host glycosaminoglycans
Sci Rep, 7, 2017
3PZW
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BU of 3pzw by Molmil
Soybean lipoxygenase-1 - re-refinement
分子名称: 1,2-ETHANEDIOL, ACETATE ION, FE (II) ION, ...
著者Chruszcz, M, Minor, W.
登録日2010-12-14
公開日2011-01-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Determination of protein structures - a series of fortunate events.
Biophys.J., 95, 2008
2BCO
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BU of 2bco by Molmil
X-ray structure of succinylglutamate desuccinalase from Vibrio Parahaemolyticus (RIMD 2210633) at the resolution 2.3 A, Northeast Structural Genomics Target Vpr14
分子名称: Succinylglutamate desuccinylase, ZINC ION
著者Kuzin, A.P, Abashidze, M, Forouhar, F, Benach, J, Zhou, W, Acton, T, Northeast Structural Genomics Consortium (NESG)
登録日2005-10-19
公開日2005-10-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献X-ray structure of succinylglutamate desuccinalase from Vibrio Parahaemolyticus (RIMD 2210633) at the resolution 2.3 A, Northeast Structural Genomics Target Vpr14
To be Published
2G7U
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BU of 2g7u by Molmil
2.3 A structure of putative catechol degradative operon regulator from Rhodococcus sp. RHA1
分子名称: transcriptional regulator
著者Zheng, H, Skarina, T, Chruszcz, M, Cymborowski, M, Grabowski, M, Onopriyenko, O, Savchenko, A, Edwards, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2006-03-01
公開日2006-04-04
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献2.3 A structure of putative catechol degradative operon regulator from Rhodococcus sp. RHA1
To be Published
3DJ5
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BU of 3dj5 by Molmil
Crystal structure of the mouse Aurora-A catalytic domain (Asn186->Gly, Lys240->Arg, Met302->Leu) in complex with Compound 290.
分子名称: 3-({3-[(6-amino-5-bromopyrimidin-4-yl)sulfanyl]propanoyl}amino)-4-methoxy-N-phenylbenzamide, serine/threonine kinase 6
著者Elling, R.A, Erlanson, D.A, Yang, W, Tangonan, B.T, Hansen, S.K, Romanowski, M.J.
登録日2008-06-22
公開日2009-05-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献New fragment-based drug discovery
To be Published
3DJ6
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BU of 3dj6 by Molmil
Crystal structure of the mouse Aurora-A catalytic domain (Asn186->Gly, Lys240->Arg, Met302->Leu) in complex with Compound 823.
分子名称: 4-methoxy-N-phenyl-3-({3-[(1H-pyrrolo[2,3-b]pyridin-5-ylmethyl)sulfanyl]propanoyl}amino)benzamide, serine/threonine kinase 6
著者Elling, R.A, Erlanson, D.A, Yang, W, Tangonan, B.T, Hansen, S.K, Romanowski, M.J.
登録日2008-06-22
公開日2009-05-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献New fragment-based drug discovery
To be Published
2B8Z
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BU of 2b8z by Molmil
Crystal structure of the interleukin-4 variant R85A
分子名称: Interleukin-4, SULFATE ION
著者Kraich, M, Klein, M, Patino, E, Harrer, H, Sebald, W, Mueller, T.D.
登録日2005-10-10
公開日2006-05-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A modular interface of IL-4 allows for scalable affinity without affecting specificity for the IL-4 receptor
Bmc Biol., 4, 2006
5H0R
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BU of 5h0r by Molmil
RNA dependent RNA polymerase ,vp4,dsRNA
分子名称: RNA (42-MER), RNA-dependent RNA polymerase, VP4 protein
著者Li, X, Zhou, N, Chen, W, Zhu, B, Wang, X, Xu, B, Wang, J, Liu, H, Cheng, L.
登録日2016-10-06
公開日2017-01-25
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Near-Atomic Resolution Structure Determination of a Cypovirus Capsid and Polymerase Complex Using Cryo-EM at 200kV
J. Mol. Biol., 429, 2017
5H5F
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The crystal structure of the yeast arginine methyltransferase SFM1 complexed with SAM
分子名称: Protein arginine N-methyltransferase SFM1, S-ADENOSYLMETHIONINE
著者Xie, W, Wang, C, Zeng, J.
登録日2016-11-05
公開日2017-01-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A flexible cofactor-binding loop in the novel arginine methyltransferase Sfm1.
FEBS Lett., 591, 2017
2ARG
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BU of 2arg by Molmil
FORMATION OF AN AMINO ACID BINDING POCKET THROUGH ADAPTIVE ZIPPERING-UP OF A LARGE DNA HAIRPIN LOOP, NMR, 9 STRUCTURES
分子名称: ARGININEAMIDE, DNA APTAMER [5'-D (*TP*GP*AP*CP*CP*AP*GP*GP*GP*CP*AP*AP*AP*CP*GP*GP*TP*AP* GP*GP*TP*GP*AP*GP*TP*GP*GP*TP*CP*A)-3']
著者Lin, C.H, Wang, W, Jones, R.A, Patel, D.J.
登録日1998-08-19
公開日1999-03-23
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Formation of an amino-acid-binding pocket through adaptive zippering-up of a large DNA hairpin loop.
Chem.Biol., 5, 1998
2GD5
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BU of 2gd5 by Molmil
Structural basis for budding by the ESCRTIII factor CHMP3
分子名称: Charged multivesicular body protein 3
著者Muziol, T.M, Pineda-Molina, E, Ravelli, R.B, Zamborlini, A, Usami, Y, Gottlinger, H, Weissenhorn, W.
登録日2006-03-15
公開日2006-06-13
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis for Budding by the ESCRT-III Factor CHMP3.
Dev.Cell, 10, 2006
3EGH
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BU of 3egh by Molmil
Crystal structure of a complex between Protein Phosphatase 1 alpha (PP1), the PP1 binding and PDZ domains of Spinophilin and the small natural molecular toxin Nodularin-R
分子名称: GLYCEROL, MANGANESE (II) ION, Serine/threonine-protein phosphatase PP1-alpha catalytic subunit, ...
著者Ragusa, M.J, Page, R, Peti, W.
登録日2008-09-10
公開日2010-03-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Spinophilin directs protein phosphatase 1 specificity by blocking substrate binding sites.
Nat.Struct.Mol.Biol., 17, 2010
5UBG
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BU of 5ubg by Molmil
Catalytic core domain of Adenosine triphosphate phosphoribosyltransferase from Campylobacter jejuni with bound Phosphoribosyl-ATP
分子名称: ATP phosphoribosyltransferase, CHLORIDE ION, PHOSPHORIBOSYL ATP, ...
著者Mittelstaedt, G, Jiao, W, Livingstone, E.K, Parker, E.J.
登録日2016-12-20
公開日2017-12-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A dimeric catalytic core relates the short and long forms of ATP-phosphoribosyltransferase.
Biochem. J., 475, 2018
3EPX
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BU of 3epx by Molmil
Crystal structure of Trypanosoma vivax nucleoside hydrolase in complex with the inhibitor (2R,3R,4S)-2-(hydroxymethyl)-1-(quinolin-8-ylmethyl)pyrrolidin-3,4-diol
分子名称: (2R,3R,4S)-2-(hydroxymethyl)-1-(quinolin-8-ylmethyl)pyrrolidine-3,4-diol, CALCIUM ION, GLYCEROL, ...
著者Versees, W, Goeminne, A, Berg, M, Vandemeulebroucke, A, Haemers, A, Augustyns, K, Steyaert, J.
登録日2008-09-30
公開日2009-03-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structures of T. vivax nucleoside hydrolase in complex with new potent and specific inhibitors.
Biochim.Biophys.Acta, 1794, 2009
5H5E
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BU of 5h5e by Molmil
The crystal structure of the yeast arginine methyltransferase SFM1 complexed with SAH
分子名称: Protein arginine N-methyltransferase SFM1, S-ADENOSYL-L-HOMOCYSTEINE
著者Xie, W, Wang, C, Zeng, J.
登録日2016-11-05
公開日2017-01-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献A flexible cofactor-binding loop in the novel arginine methyltransferase Sfm1.
FEBS Lett., 591, 2017
2AZO
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BU of 2azo by Molmil
DNA MISMATCH REPAIR PROTEIN MUTH FROM E. COLI
分子名称: MUTH
著者Yang, W.
登録日1997-11-20
公開日1998-05-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for MutH activation in E.coli mismatch repair and relationship of MutH to restriction endonucleases.
EMBO J., 17, 1998
5GR7
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Mouse MHC class I H-2Kd with a MERS-CoV-derived peptide 37-1
分子名称: Beta-2-microglobulin, H-2 class I histocompatibility antigen, K-D alpha chain, ...
著者Liu, K, Chai, Y, Qi, J, Tan, W, Liu, W.J, Gao, G.F.
登録日2016-08-08
公開日2017-06-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Protective T Cell Responses Featured by Concordant Recognition of Middle East Respiratory Syndrome Coronavirus-Derived CD8+ T Cell Epitopes and Host MHC.
J. Immunol., 198, 2017

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