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PDB: 12895 results

4HTC
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THE REFINED STRUCTURE OF THE HIRUDIN-THROMBIN COMPLEX
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-THROMBIN (LARGE SUBUNIT), ALPHA-THROMBIN (SMALL SUBUNIT), ...
Authors:Tulinsky, A, Rydel, T.J, Bode, W, Huber, R.
Deposit date:1993-06-25
Release date:1994-01-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Refined structure of the hirudin-thrombin complex.
J.Mol.Biol., 221, 1991
2RI8
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Penicillium citrinum alpha-1,2-mannosidase complex with glycerol
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
Authors:Lobsanov, Y.D, Yoshida, T, Desmet, T, Nerinckx, W, Yip, P, Claeyssens, M, Herscovics, A, Howell, P.L.
Deposit date:2007-10-10
Release date:2008-03-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Modulation of activity by Arg407: structure of a fungal alpha-1,2-mannosidase in complex with a substrate analogue.
Acta Crystallogr.,Sect.D, 64, 2008
1BHW
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LOW TEMPERATURE MIDDLE RESOLUTION STRUCTURE OF XYLOSE ISOMERASE FROM MASC DATA
Descriptor: XYLOSE ISOMERASE
Authors:Ramin, M, Shepard, W, Fourme, R, Kahn, R.
Deposit date:1998-06-10
Release date:1998-11-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Multiwavelength anomalous solvent contrast (MASC): derivation of envelope structure-factor amplitudes and comparison with model values.
Acta Crystallogr.,Sect.D, 55, 1999
2C7K
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Laue structure of phycoerythrocyanin from Mastigocladus laminosus
Descriptor: BILIVERDINE IX ALPHA, PHYCOCYANOBILIN, PHYCOERYTHROCYANIN ALPHA CHAIN, ...
Authors:Schmidt, M, Krasselt, A, Reuter, W.
Deposit date:2005-11-24
Release date:2006-01-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Local Protein Flexibility as a Prerequisite for Reversible Chromophore Isomerization in Alpha-Phycoerythrocyanin
Biochim.Biophys.Acta, 1764, 2006
2CEZ
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Phosphorylation of the Cytoplasmic Tail of Tissue Factor and its Role in Modulating Structure and Binding Affinity
Descriptor: TISSUE FACTOR
Authors:Sen, M, Agrawal, S, Craft, J.W, Ruf, W, Legge, G.B.
Deposit date:2006-02-13
Release date:2007-02-20
Last modified:2019-10-02
Method:SOLUTION NMR
Cite:Spectroscopic Characterization of Successive Phosphorylation of the Tissue Factor Cytoplasmic Region.
Open Spectrosc J, 3, 2009
5IA8
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Structure of a Ubiquitin like protein with an E1 fragment
Descriptor: Ubiquitin-like modifier-activating enzyme 5,Ubiquitin-fold modifier 1
Authors:Oweis, W, Padala, P, Wiener, R.
Deposit date:2016-02-21
Release date:2017-03-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Novel insights into the interaction of UBA5 with UFM1 via a UFM1-interacting sequence.
Sci Rep, 7, 2017
2ROH
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BU of 2roh by Molmil
The DNA binding domain of RTBP1
Descriptor: Telomere binding protein-1
Authors:Lee, W, Ko, S.
Deposit date:2008-03-22
Release date:2009-03-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the DNA binding domain of rice telomere binding protein RTBP1
Biochemistry, 48, 2009
2C9A
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BU of 2c9a by Molmil
Crystal structure of the MAM-Ig module of receptor protein tyrosine phosphatase mu
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE MU, ...
Authors:Aricescu, A.R, Hon, W.C, Siebold, C, Lu, W, Van Der Merwe, P.A, Jones, E.Y.
Deposit date:2005-12-09
Release date:2006-01-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular Analysis of Receptor Protein Tyrosine Phosphatase Mu-Mediated Cell Adhesion.
Embo J., 25, 2006
2CJ2
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chloroperoxidase complexed with formate (sugar cryoprotectant)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLOROPEROXIDASE, ...
Authors:Kuhnel, K, Blankenfeldt, W, Terner, J, Schlichting, I.
Deposit date:2006-03-26
Release date:2006-06-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structures of Chloroperoxidase with its Bound Substrates and Complexed with Formate, Acetate, and Nitrate.
J.Biol.Chem., 281, 2006
2RU9
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Structure of the YAM domain of E. coli Transporter YajR
Descriptor: Predicted transporter
Authors:Liu, X, Feng, W.
Deposit date:2014-02-27
Release date:2014-07-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Atomic resolution structure of the E. coli YajR transporter YAM domain.
Biochem.Biophys.Res.Commun., 450, 2014
2RSD
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Solution structure of the plant homeodomain (PHD) of the E3 SUMO ligase Siz1 from rice
Descriptor: E3 SUMO-protein ligase SIZ1, ZINC ION
Authors:Shindo, H, Tsuchiya, W, Suzuki, R, Yamazaki, T.
Deposit date:2012-01-12
Release date:2012-08-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:PHD finger of the SUMO ligase Siz/PIAS family in rice reveals specific binding for methylated histone H3 at lysine 4 and arginine 2
Febs Lett., 586, 2012
5IIU
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Crystal structure of Equine Serum Albumin in the presence of 10 mM zinc at pH 6.9
Descriptor: SULFATE ION, Serum albumin, ZINC ION
Authors:Handing, K.B, Shabalin, I.G, Cooper, D.R, Cymborowski, M.T, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2016-03-01
Release date:2016-03-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Circulatory zinc transport is controlled by distinct interdomain sites on mammalian albumins.
Chem Sci, 7, 2016
2C7J
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BU of 2c7j by Molmil
Phycoerythrocyanin from Mastigocladus laminosus, 295 K, 3.0 A
Descriptor: BILIVERDINE IX ALPHA, PHYCOCYANOBILIN, PHYCOERYTHROCYANIN ALPHA CHAIN, ...
Authors:Schmidt, M, Krasselt, A, Reuter, W.
Deposit date:2005-11-24
Release date:2006-01-25
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Local Protein Flexibility as a Prerequisite for Reversible Chromophore Isomerization in Alfa- Phycoerythrocyanin
Biochim.Biophys.Acta, 1764, 2006
2C7L
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BU of 2c7l by Molmil
Low temperature structure of phycoerythrocyanin from Mastigocladus laminosus
Descriptor: BILIVERDINE IX ALPHA, PHYCOCYANOBILIN, PHYCOERYTHROCYANIN ALPHA CHAIN, ...
Authors:Schmidt, M, Krasselt, A, Reuter, W.
Deposit date:2005-11-25
Release date:2006-01-25
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Local Protein Flexibility as a Prerequisite for Reversible Chromophore Isomerization in Alpha-Phycoerythrocyanin
Biochim.Biophys.Acta, 1764, 2006
2RPJ
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BU of 2rpj by Molmil
Solution structure of Fn14 CRD domain
Descriptor: Tumor necrosis factor receptor superfamily member 12A
Authors:He, F, Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-05-19
Release date:2009-03-24
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of the cysteine-rich domain in Fn14, a member of the tumor necrosis factor receptor superfamily
Protein Sci., 18, 2009
2C6P
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BU of 2c6p by Molmil
Membrane-bound glutamate carboxypeptidase II (GCPII) in complex with phosphate anion
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Mesters, J.R, Barinka, C, Li, W, Tsukamoto, T, Majer, P, Slusher, B.S, Konvalinka, J, Hilgenfeld, R.
Deposit date:2005-11-11
Release date:2006-02-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structure of Glutamate Carboxypeptidase II, a Drug Target in Neuronal Damage and Prostate Cancer.
Embo J., 25, 2006
9FT0
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BU of 9ft0 by Molmil
Yeast 20S proteasome in complex with epoxyketone inhibitor 42
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE, CHLORIDE ION, ...
Authors:Maurits, E, Huber, E.M, Dekker, P.M, Wang, X, Heinemeyer, W, Florea, B.I, Groll, M, Overkleeft, H.S.
Deposit date:2024-06-23
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure-based design of peptide epoxyketones selectively targeting the three human immunoproteasome active sites
to be published
1EZT
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BU of 1ezt by Molmil
HIGH-RESOLUTION SOLUTION STRUCTURE OF FREE RGS4 BY NMR
Descriptor: REGULATOR OF G-PROTEIN SIGNALING 4
Authors:Moy, F.J, Chanda, P.K, Cockett, M.I, Edris, W, Jones, P.G, Mason, K, Semus, S, Powers, R.
Deposit date:2000-05-11
Release date:2001-01-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of free RGS4 reveals an induced conformational change upon binding Galpha.
Biochemistry, 39, 2000
5IM5
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Crystal structure of designed two-component self-assembling icosahedral cage I53-40
Descriptor: Designed Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase, Designed Riboflavin synthase
Authors:Liu, Y.A, Cascio, D, Sawaya, M.R, Bale, J.B, Collazo, M.J, Thomas, C, Sheffler, W, King, N.P, Baker, D, Yeates, T.O.
Deposit date:2016-03-05
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.699 Å)
Cite:Accurate design of megadalton-scale two-component icosahedral protein complexes.
Science, 353, 2016
1EZY
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HIGH-RESOLUTION SOLUTION STRUCTURE OF FREE RGS4 BY NMR
Descriptor: REGULATOR OF G-PROTEIN SIGNALING 4
Authors:Moy, F.J, Chanda, P.K, Cockett, M.I, Edris, W, Jones, P.G, Mason, K, Semus, S, Powers, R.
Deposit date:2000-05-12
Release date:2001-01-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of free RGS4 reveals an induced conformational change upon binding Galpha.
Biochemistry, 39, 2000
2CH5
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BU of 2ch5 by Molmil
Crystal structure of human N-acetylglucosamine kinase in complex with N-acetylglucosamine
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Weihofen, W.A, Berger, M, Chen, H, Saenger, W, Hinderlich, S.
Deposit date:2006-03-13
Release date:2006-09-18
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of Human N-Acetylglucosamine Kinase in Two Complexes with N-Acetylglucosamine and with Adp/Glucose: Insights Into Substrate Specificity and Regulation.
J.Mol.Biol., 364, 2006
2CIW
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BU of 2ciw by Molmil
Chloroperoxidase iodide complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLOROPEROXIDASE, IODIDE ION, ...
Authors:Kuhnel, K, Blankenfeldt, W, Terner, J, Schlichting, I.
Deposit date:2006-03-26
Release date:2006-06-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal Structures of Chloroperoxidase with its Bound Substrates and Complexed with Formate, Acetate, and Nitrate.
J.Biol.Chem., 281, 2006
2CIZ
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chloroperoxidase complexed with acetate
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kuhnel, K, Blankenfeldt, W, Terner, J, Schlichting, I.
Deposit date:2006-03-26
Release date:2006-06-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structures of Chloroperoxidase with its Bound Substrates and Complexed with Formate, Acetate, and Nitrate.
J.Biol.Chem., 281, 2006
8XN9
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BU of 8xn9 by Molmil
Nipah virus fusion glycoprotein in complex with a broadly neutralizing antibody 1D6
Descriptor: 1D6 VH, 1D6 VL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Fan, P.F, Ren, Y, Yu, C.M, Chen, W.
Deposit date:2023-12-29
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (1.99 Å)
Cite:Nipah virus fusion glycoprotein in complex with a broadly neutralizing antibody 1D6
To Be Published
7SHP
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Crystal structure of hSTING in complex with c[2',3'-(ribo-2'-G, xylo-3'-A)-MP](RJ244)
Descriptor: (2S,5R,7R,8R,10S,12aR,14R,15R,15aR,16R)-7-(2-amino-6-oxo-3,6-dihydro-9H-purin-9-yl)-14-(6-amino-9H-purin-9-yl)-2,10,15,16-tetrahydroxyoctahydro-2H,10H,12H-5,8-methano-2lambda~5~,10lambda~5~-furo[3,2-l][1,3,6,9,11,2,10]pentaoxadiphosphacyclotetradecine-2,10-dione, Stimulator of interferon genes protein
Authors:Xie, W, Lama, L, Yang, X.J, Kuryavyi, V, Nudelman, I, Glickman, J.F, Jones, R.A, Tuschl, T, Patel, D.J.
Deposit date:2021-10-11
Release date:2022-10-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Arabinose- and xylose-modified analogs of 2',3'-cGAMP act as STING agonists.
Cell Chem Biol, 2023

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