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PDB: 471 results

5ZKY
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BU of 5zky by Molmil
Crystal structure of DFA-IIIase from Arthrobacter chlorophenolicus A6 without its lid
Descriptor: DFA-IIIase
Authors:Yu, S.H, Shen, H, Li, X, Mu, W.M.
Deposit date:2018-03-26
Release date:2018-12-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional basis of difructose anhydride III hydrolase, which sequentially converts inulin using the same catalytic residue
Acs Catalysis, 8, 2018
5ZKS
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BU of 5zks by Molmil
Crystal structure of DFA-IIIase from Arthrobacter chlorophenolicus A6
Descriptor: DFA-IIIase
Authors:Yu, S.H, Shen, H, Li, X, Mu, W.M.
Deposit date:2018-03-26
Release date:2018-12-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional basis of difructose anhydride III hydrolase, which sequentially converts inulin using the same catalytic residue
Acs Catalysis, 8, 2018
7SPZ
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BU of 7spz by Molmil
Nucleotide-free Get3 in two open forms
Descriptor: ATPase ASNA1 homolog, ZINC ION
Authors:Fry, M.Y, Maggiolo, A.O, Clemons Jr, W.M.
Deposit date:2021-11-04
Release date:2022-07-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structurally derived universal mechanism for the catalytic cycle of the tail-anchored targeting factor Get3.
Nat.Struct.Mol.Biol., 29, 2022
7SQ0
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BU of 7sq0 by Molmil
Get3 bound to ADP and the transmembrane domain of the tail-anchored protein Bos1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase ASNA1 homolog, MAGNESIUM ION, ...
Authors:Fry, M.Y, Maggiolo, A.O, Clemons Jr, W.M.
Deposit date:2021-11-04
Release date:2022-07-20
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structurally derived universal mechanism for the catalytic cycle of the tail-anchored targeting factor Get3.
Nat.Struct.Mol.Biol., 29, 2022
7SPY
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BU of 7spy by Molmil
Get3 bound to ATP from G. intestinalis in the closed form
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATPase ASNA1 homolog, MAGNESIUM ION, ...
Authors:Fry, M.Y, Maggiolo, A.O, Clemons Jr, W.M.
Deposit date:2021-11-04
Release date:2022-07-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Structurally derived universal mechanism for the catalytic cycle of the tail-anchored targeting factor Get3.
Nat.Struct.Mol.Biol., 29, 2022
5ZKU
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BU of 5zku by Molmil
Crystal structure of DFA-IIIase from Arthrobacter chlorophenolicus A6 in complex with DFA-III
Descriptor: (2R,3'S,4'S,4aR,5'R,6R,7R,7aS)-4a,5',6-tris(hydroxymethyl)spiro[3,6,7,7a-tetrahydrofuro[2,3-b][1,4]dioxine-2,2'-oxolane ]-3',4',7-triol, DFA-IIIase
Authors:Yu, S.H, Shen, H, Li, X, Mu, W.M.
Deposit date:2018-03-26
Release date:2018-12-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural and functional basis of difructose anhydride III hydrolase, which sequentially converts inulin using the same catalytic residue
Acs Catalysis, 8, 2018
5ZND
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BU of 5znd by Molmil
8-mer nanotube derived from 24-mer rHuHF nanocage
Descriptor: Ferritin heavy chain
Authors:Wang, W.M, Wang, L.L, Zang, J.C, Chen, H, Zhao, G.H, Wang, H.F.
Deposit date:2018-04-09
Release date:2018-11-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Selective Elimination of the Key Subunit Interfaces Facilitates Conversion of Native 24-mer Protein Nanocage into 8-mer Nanorings.
J. Am. Chem. Soc., 140, 2018
5ZL4
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BU of 5zl4 by Molmil
Crystal structure of DFA-IIIase from Arthrobacter chlorophenolicus A6 wihout its lid in complex with GF2
Descriptor: DFA-IIIase, beta-D-fructofuranose-(2-1)-beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Yu, S.H, Shen, H, Li, X, Mu, W.M.
Deposit date:2018-03-26
Release date:2018-12-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and functional basis of difructose anhydride III hydrolase, which sequentially converts inulin using the same catalytic residue
Acs Catalysis, 8, 2018
6AGG
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BU of 6agg by Molmil
Crystal structure of agmatine-AMPPCP-Mg complexed TiaS (tRNAIle2 agmatidine synthetase)
Descriptor: ACETATE ION, AGMATINE, AMMONIUM ION, ...
Authors:Dong, J.S, Gong, W.M.
Deposit date:2018-08-11
Release date:2018-09-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.706 Å)
Cite:Structure of tRNA-Modifying Enzyme TiaS and Motions of Its Substrate Binding Zinc Ribbon.
J. Mol. Biol., 430, 2018
1QD7
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BU of 1qd7 by Molmil
PARTIAL MODEL FOR 30S RIBOSOMAL SUBUNIT
Descriptor: CENTRAL FRAGMENT OF 16 S RNA, END FRAGMENT OF 16 S RNA, S15 RIBOSOMAL PROTEIN, ...
Authors:Clemons Jr, W.M, May, J.L.C, Wimberly, B.T, McCutcheon, J.P, Capel, M.S, Ramakrishnan, V.
Deposit date:1999-07-09
Release date:1999-08-31
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (5.5 Å)
Cite:Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.
Nature, 400, 1999
2QKW
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BU of 2qkw by Molmil
Structural basis for activation of plant immunity by bacterial effector protein AvrPto
Descriptor: Avirulence protein, Protein kinase
Authors:Xing, W.M, Zou, Y, Liu, Q, Hao, Q, Zhou, J.M, Chai, J.J.
Deposit date:2007-07-11
Release date:2007-08-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The structural basis for activation of plant immunity by bacterial effector protein AvrPto
Nature, 449, 2007
8G01
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BU of 8g01 by Molmil
YES Complex - E. coli MraY, Protein E ID21, E. coli SlyD
Descriptor: FKBP-type peptidyl-prolyl cis-trans isomerase SlyD, GPE, Phospho-N-acetylmuramoyl-pentapeptide-transferase
Authors:Orta, A.K, Clemons, W.M, Riera, N.
Deposit date:2023-01-31
Release date:2023-07-26
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The mechanism of the phage-encoded protein antibiotic from Phi X174.
Science, 381, 2023
8G02
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BU of 8g02 by Molmil
YES Complex - E. coli MraY, Protein E PhiX174, E. coli SlyD
Descriptor: Lysis protein E, Peptidyl-prolyl cis-trans isomerase, Phospho-N-acetylmuramoyl-pentapeptide-transferase
Authors:Orta, A.K, Clemons, W.M, Li, Y.E.
Deposit date:2023-01-31
Release date:2023-07-26
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The mechanism of the phage-encoded protein antibiotic from Phi X174.
Science, 381, 2023
2QT1
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BU of 2qt1 by Molmil
Human nicotinamide riboside kinase 1 in complex with nicotinamide riboside
Descriptor: Nicotinamide riboside, Nicotinamide riboside kinase 1, PHOSPHATE ION, ...
Authors:Rabeh, W.M, Tempel, W, Nedyalkova, L, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Brenner, C, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2007-07-31
Release date:2007-08-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Nicotinamide Riboside Kinase Structures Reveal New Pathways to NAD(+).
Plos Biol., 5, 2007
2QSZ
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BU of 2qsz by Molmil
Human nicotinamide riboside kinase 1 in complex with nicotinamide mononucleotide
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, CHLORIDE ION, Nicotinamide riboside kinase 1, ...
Authors:Rabeh, W.M, Tempel, W, Nedyalkova, L, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Brenner, C, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2007-07-31
Release date:2007-08-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Nicotinamide Riboside Kinase Structures Reveal New Pathways to NAD(+).
Plos Biol., 5, 2007
2H6E
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BU of 2h6e by Molmil
Crystal structure of the D-arabinose dehydrogenase from Sulfolobus solfataricus
Descriptor: D-arabinose 1-dehydrogenase, ZINC ION
Authors:Brouns, S.J.J, Turnbull, A.P, Akerboom, J, Willemen, H.L.D.M, De Vos, W.M, Van der Oost, J.
Deposit date:2006-05-31
Release date:2007-06-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure and Biochemical Properties of the d-Arabinose Dehydrogenase from Sulfolobus solfataricus
J.Mol.Biol., 371, 2007
2H17
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BU of 2h17 by Molmil
Structure of human ADP-ribosylation factor-like 5 (ARL5)
Descriptor: ADP-ribosylation factor-like protein 5A, GUANOSINE-5'-DIPHOSPHATE, UNKNOWN ATOM OR ION
Authors:Rabeh, W.M, Tempel, W, Yaniw, D, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2006-05-16
Release date:2006-06-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of human ADP-ribosylation factor-like 5 (ARL5)
To be Published
2QT0
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BU of 2qt0 by Molmil
Human nicotinamide riboside kinase 1 in complex with nicotinamide riboside and an ATP analogue
Descriptor: MAGNESIUM ION, Nicotinamide riboside, Nicotinamide riboside kinase 1, ...
Authors:Rabeh, W.M, Tempel, W, Nedyalkova, L, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Brenner, C, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2007-07-31
Release date:2007-08-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Nicotinamide Riboside Kinase Structures Reveal New Pathways to NAD(+).
Plos Biol., 5, 2007
8H7V
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BU of 8h7v by Molmil
Trans-3/4-proline-hydroxylase H11 with AKG
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, Phytanoyl-CoA dioxygenase
Authors:Gong, W.M, Hu, X.Y.
Deposit date:2022-10-21
Release date:2023-04-19
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structures of L-proline trans-hydroxylase reveal the catalytic specificity and provide deeper insight into AKG-dependent hydroxylation.
Acta Crystallogr D Struct Biol, 79, 2023
8H85
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BU of 8h85 by Molmil
Trans-3/4-proline-hydroxylase H11 with 3-hydroxyl-proline
Descriptor: 3-HYDROXYPROLINE, Phytanoyl-CoA dioxygenase
Authors:Gong, W.M, Hu, X.Y.
Deposit date:2022-10-21
Release date:2023-04-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structures of L-proline trans-hydroxylase reveal the catalytic specificity and provide deeper insight into AKG-dependent hydroxylation.
Acta Crystallogr D Struct Biol, 79, 2023
8H81
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BU of 8h81 by Molmil
Trans-3/4-proline-hydroxylase H11 with 4-Hydroxyl-proline
Descriptor: 4-HYDROXYPROLINE, Phytanoyl-CoA dioxygenase
Authors:Gong, W.M, Hu, X.Y.
Deposit date:2022-10-21
Release date:2023-04-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structures of L-proline trans-hydroxylase reveal the catalytic specificity and provide deeper insight into AKG-dependent hydroxylation.
Acta Crystallogr D Struct Biol, 79, 2023
8H7T
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BU of 8h7t by Molmil
Trans-3/4-proline-hydroxylase H11 apo structure
Descriptor: CHLORIDE ION, Phytanoyl-CoA dioxygenase
Authors:Gong, W.M, Hu, X.Y.
Deposit date:2022-10-21
Release date:2023-04-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structures of L-proline trans-hydroxylase reveal the catalytic specificity and provide deeper insight into AKG-dependent hydroxylation.
Acta Crystallogr D Struct Biol, 79, 2023
8H7Y
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BU of 8h7y by Molmil
Trans-3/4-proline-hydroxylase H11 with AKG and L-proline
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, PROLINE, ...
Authors:Gong, W.M, Hu, X.Y.
Deposit date:2022-10-21
Release date:2023-04-19
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structures of L-proline trans-hydroxylase reveal the catalytic specificity and provide deeper insight into AKG-dependent hydroxylation.
Acta Crystallogr D Struct Biol, 79, 2023
8H0O
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BU of 8h0o by Molmil
Crystal structure of human serum albumin and ruthenium PZA complex adduct
Descriptor: Albumin, CHLORIDE ION, NITRIC OXIDE, ...
Authors:Gong, W.J, Wang, Y, Bai, H.H, Wang, W.M, Wang, H.F.
Deposit date:2022-09-30
Release date:2023-10-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.479 Å)
Cite:Crystal structure of human serum albumin and ruthenium PZA complex adduct
To Be Published
2HIN
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BU of 2hin by Molmil
Structure of N15 Cro at 1.05 A: an ortholog of lambda Cro with a completely different but equally effective dimerization mechanism
Descriptor: Repressor protein, SULFATE ION
Authors:Dubrava, M.S, Ingram, W.M, Roberts, S.A, Weichsel, A, Montfort, W.R, Cordes, M.H.
Deposit date:2006-06-29
Release date:2007-07-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:N15 Cro and lambda Cro: orthologous DNA-binding domains with completely different but equally effective homodimer interfaces.
Protein Sci., 17, 2008

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PDB entries from 2024-10-30

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