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PDB: 1306 results

5SC1
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CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z431807512
Descriptor: 1,2-ETHANEDIOL, CD44 antigen, DIMETHYL SULFOXIDE, ...
Authors:Bradshaw, W.J, Katis, V.L, Bezerra, G.A, Koekemoer, L, von Delft, F, Bountra, C, Brennan, P.E, Gileadi, O.
Deposit date:2021-09-14
Release date:2021-09-22
Method:X-RAY DIFFRACTION (1.165 Å)
Cite:CD44 PanDDA analysis group deposition
To Be Published
5SC2
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BU of 5sc2 by Molmil
CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z190780124
Descriptor: (3S)-N-[(1R)-1-cyclopropylethyl]-2-oxo-2,3-dihydropyridine-3-carboxamide, 1,2-ETHANEDIOL, CD44 antigen, ...
Authors:Bradshaw, W.J, Katis, V.L, Bezerra, G.A, Koekemoer, L, von Delft, F, Bountra, C, Brennan, P.E, Gileadi, O.
Deposit date:2021-09-14
Release date:2021-09-22
Method:X-RAY DIFFRACTION (1.208 Å)
Cite:CD44 PanDDA analysis group deposition
To Be Published
5SC3
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CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z422471910
Descriptor: 1,2-ETHANEDIOL, CD44 antigen, DIMETHYL SULFOXIDE, ...
Authors:Bradshaw, W.J, Katis, V.L, Bezerra, G.A, Koekemoer, L, von Delft, F, Bountra, C, Brennan, P.E, Gileadi, O.
Deposit date:2021-09-14
Release date:2021-09-22
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:CD44 PanDDA analysis group deposition
To Be Published
5SC4
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BU of 5sc4 by Molmil
CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z927412236
Descriptor: (2R)-2-amino-1-[(2S)-2-methylpiperidin-1-yl]propan-1-one, 1,2-ETHANEDIOL, CD44 antigen, ...
Authors:Bradshaw, W.J, Katis, V.L, Bezerra, G.A, Koekemoer, L, von Delft, F, Bountra, C, Brennan, P.E, Gileadi, O.
Deposit date:2021-09-14
Release date:2021-09-22
Method:X-RAY DIFFRACTION (1.165 Å)
Cite:CD44 PanDDA analysis group deposition
To Be Published
5SC5
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BU of 5sc5 by Molmil
CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z56827661
Descriptor: 1,2-ETHANEDIOL, CD44 antigen, DIMETHYL SULFOXIDE, ...
Authors:Bradshaw, W.J, Katis, V.L, Bezerra, G.A, Koekemoer, L, von Delft, F, Bountra, C, Brennan, P.E, Gileadi, O.
Deposit date:2021-09-14
Release date:2021-09-22
Method:X-RAY DIFFRACTION (1.171 Å)
Cite:CD44 PanDDA analysis group deposition
To Be Published
5SC6
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CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with POB0019
Descriptor: 1,2-ETHANEDIOL, CD44 antigen, DIMETHYL SULFOXIDE, ...
Authors:Bradshaw, W.J, Katis, V.L, Bezerra, G.A, Koekemoer, L, von Delft, F, Bountra, C, Brennan, P.E, Gileadi, O.
Deposit date:2021-09-14
Release date:2021-09-22
Method:X-RAY DIFFRACTION (1.327 Å)
Cite:CD44 PanDDA analysis group deposition
To Be Published
5SC7
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BU of 5sc7 by Molmil
CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with POB0120
Descriptor: (2R)-1',4'-dihydro-2'H-spiro[pyrrolidine-2,3'-quinolin]-2'-one, 1,2-ETHANEDIOL, CD44 antigen, ...
Authors:Bradshaw, W.J, Katis, V.L, Bezerra, G.A, Koekemoer, L, von Delft, F, Bountra, C, Brennan, P.E, Gileadi, O.
Deposit date:2021-09-14
Release date:2021-09-22
Method:X-RAY DIFFRACTION (1.197 Å)
Cite:CD44 PanDDA analysis group deposition
To Be Published
5M9M
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BU of 5m9m by Molmil
Human angiogenin PD variant Q77P
Descriptor: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Angiogenin, ...
Authors:Bradshaw, W.J, Rehman, S, Pham, T.T.K, Thiyagarajan, N, Lee, R.L, Subramanian, V, Acharya, K.R.
Deposit date:2016-11-01
Release date:2017-02-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural insights into human angiogenin variants implicated in Parkinson's disease and Amyotrophic Lateral Sclerosis.
Sci Rep, 7, 2017
5NJL
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BU of 5njl by Molmil
Cwp2 from Clostridium difficile
Descriptor: Cell surface protein (Putative S-layer protein), SULFATE ION
Authors:Bradshaw, W.J, Kirby, J.M, Roberts, A.K, Shone, C.C, Acharya, K.R.
Deposit date:2017-03-29
Release date:2017-07-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cwp2 from Clostridium difficile exhibits an extended three domain fold and cell adhesion in vitro.
FEBS J., 284, 2017
5UI9
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BU of 5ui9 by Molmil
Crystal Structure of an Oxidoreductase from Agrobacterium radiobacter in Complex with NAD+, 2 -hydroxy-2-hydroxymethyl propanoic acid and Magnesium
Descriptor: (2S)-2,3-dihydroxy-2-methylpropanoic acid, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Cook, W.J, Fedorov, A.A, Fedorov, E.V, Huang, H, Bonanno, J.B, Gerlt, J.A, Almo, S.C.
Deposit date:2017-01-13
Release date:2017-02-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal Structure of an Oxidoreductase from Agrobacterium radiobacter in Complex with NAD+, 2 -hydroxy-2-hydroxymethyl propanoic acid and Magnesium
To be published
1QX2
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BU of 1qx2 by Molmil
X-ray Structure of Calcium-loaded Calbindomodulin (A Calbindin D9k Re-engineered to Undergo a Conformational Opening) at 1.44 A Resolution
Descriptor: CALCIUM ION, Vitamin D-dependent calcium-binding protein, intestinal, ...
Authors:Bunick, C.G, Nelson, M.R, Mangahas, S, Mizoue, L.S, Bunick, G.J, Chazin, W.J.
Deposit date:2003-09-04
Release date:2004-05-25
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Designing Sequence to Control Protein Function in an EF-Hand Protein
J.Am.Chem.Soc., 126, 2004
1R4Z
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BU of 1r4z by Molmil
Bacillus subtilis lipase A with covalently bound Rc-IPG-phosphonate-inhibitor
Descriptor: Lipase, [(4R)-2,2-DIMETHYL-1,3-DIOXOLAN-4-YL]METHYL HYDROGEN HEX-5-ENYLPHOSPHONATE
Authors:Droege, M.J, Van Pouderoyen, G, Vrenken, T.E, Rueggeberg, C.J, Reetz, M.T, Dijkstra, B.W, Quax, W.J.
Deposit date:2003-10-09
Release date:2004-10-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Directed Evolution of Bacillus subtilis Lipase A by Use of Enantiomeric Phosphonate Inhibitors: Crystal Structures and Phage Display Selection
Chembiochem, 7, 2005
1RD3
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BU of 1rd3 by Molmil
2.5A Structure of Anticoagulant Thrombin Variant E217K
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, PHOSPHATE ION, ...
Authors:Carter, W.J, Myles, T, Leung, L.L, Huntington, J.A.
Deposit date:2003-11-05
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Anticoagulant Thrombin Variant E217K Provides Insights into Thrombin Allostery
J.Biol.Chem., 279, 2004
1RZ0
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BU of 1rz0 by Molmil
Flavin reductase PheA2 in native state
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, phenol 2-hydroxylase component B
Authors:van den Heuvel, R.H, Westphal, A.H, Heck, A.J, Walsh, M.A, Rovida, S, van Berkel, W.J, Mattevi, A.
Deposit date:2003-12-23
Release date:2004-04-06
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Studies on Flavin Reductase PheA2 Reveal Binding of NAD in an Unusual Folded Conformation and Support Novel Mechanism of Action.
J.Biol.Chem., 279, 2004
1RO9
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BU of 1ro9 by Molmil
CRYSTAL STRUCTURES OF THE CATALYTIC DOMAIN OF PHOSPHODIESTERASE 4B2B COMPLEXED WITH 8-Br-AMP
Descriptor: 8-BROMO-ADENOSINE-5'-MONOPHOSPHATE, ZINC ION, cAMP-specific 3',5'-cyclic phosphodiesterase 4B
Authors:Xu, R.X, Rocque, W.J, Lambert, M.H, Vanderwall, D.E, Nolte, R.T.
Deposit date:2003-12-01
Release date:2004-12-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal structures of the catalytic domain of phosphodiesterase 4B complexed with AMP, 8-Br-AMP, and rolipram.
J.Mol.Biol., 337, 2004
1RRI
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BU of 1rri by Molmil
DHNA complex with 3-(5-amino-7-hydroxy-[1,2,3] triazolo [4,5-d]pyrimidin-2-yl)-benzoic acid
Descriptor: 3-(5-AMINO-7-HYDROXY-[1,2,3]TRIAZOLO[4,5-D]PYRIMIDIN-2-YL)-BENZOIC ACID, Dihydroneopterin aldolase
Authors:Sanders, W.J, Nienaber, V.L, Lerner, C.G, McCall, J.O, Merrick, S.M, Swanson, S.J, Harlan, J.E, Stoll, V.S, Stamper, G.F, Betz, S.F, Condroski, K.R, Meadows, R.P, Severin, J.M, Walter, K.A, Magdalinos, P, Jakob, C.G, Wagner, R, Beutel, B.A.
Deposit date:2003-12-08
Release date:2004-03-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of Potent Inhibitors of Dihydroneopterin Aldolase Using CrystaLEAD High-Throughput X-ray Crystallographic Screening and Structure-Directed Lead Optimization.
J.Med.Chem., 47, 2004
1SK6
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BU of 1sk6 by Molmil
Crystal structure of the adenylyl cyclase domain of anthrax edema factor (EF) in complex with calmodulin, 3',5' cyclic AMP (cAMP), and pyrophosphate
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CALCIUM ION, Calmodulin, ...
Authors:Guo, Q, Shen, Y, Zhukovskaya, N.L, Tang, W.J.
Deposit date:2004-03-04
Release date:2004-06-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural and kinetic analyses of the interaction of anthrax adenylyl cyclase toxin with reaction products cAMP and pyrophosphate.
J.Biol.Chem., 279, 2004
1SQA
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BU of 1sqa by Molmil
Substituted 2-Naphthamidine Inhibitors of Urokinase
Descriptor: 6-[(Z)-AMINO(IMINO)METHYL]-N-[4-(AMINOMETHYL)PHENYL]-4-(PYRIMIDIN-2-YLAMINO)-2-NAPHTHAMIDE, SULFATE ION, Urokinase-type plasminogen activator
Authors:Wendt, M.D, Geyer, A, McClellan, W.J, Rockway, T.W, Weitzberg, M, Zhao, X, Stewart, K, Nienaber, V, Klinghofer, V, Giranda, V.L.
Deposit date:2004-03-18
Release date:2004-04-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Interaction with the S1beta-pocket of urokinase: 8-heterocycle substituted and 6,8-disubstituted 2-naphthamidine urokinase inhibitors.
Bioorg.Med.Chem.Lett., 14, 2004
1SBO
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BU of 1sbo by Molmil
Solution Structure of putative anti sigma factor antagonist from Thermotoga maritima (TM1442)
Descriptor: Putative anti-sigma factor antagonist TM1442
Authors:Etezady-Esfarjaini, T, Placzek, W.J, Herrmann, T, Lesley, S.A, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:2004-02-10
Release date:2004-12-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of the putative anti-sigma-factor antagonist TM1442 from Thermotoga maritima in the free and phosphorylated states.
Magn.Reson.Chem., 44 Spec No, 2006
1PX6
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BU of 1px6 by Molmil
A folding mutant of human class pi glutathione transferase, created by mutating aspartate 153 of the wild-type protein to asparagine
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLUTATHIONE, Glutathione S-transferase P
Authors:Kong, G.K.-W, Polekhina, G, McKinstry, W.J, Parker, M.W, Dragani, B, Aceto, A, Paludi, D, Principe, D.R, Mannervik, B, Stenberg, G.
Deposit date:2003-07-02
Release date:2003-07-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The multi-functional role of a highly conserved aspartic acid residue in glutathione transferase P1-1
To be Published
1PSB
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BU of 1psb by Molmil
Solution structure of calcium loaded S100B complexed to a peptide from N-Terminal regulatory domain of NDR kinase.
Descriptor: Ndr Ser/Thr kinase-like protein, S-100 protein, beta chain
Authors:Bhattacharya, S, Large, E, Heizmann, C.W, Hemmings, B, Chazin, W.J.
Deposit date:2003-06-21
Release date:2003-12-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the Ca(2+)/S100B/NDR Kinase Peptide Complex: Insights into S100 Target Specificity and Activation of the Kinase.
Biochemistry, 42, 2003
1SMT
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SMTB REPRESSOR FROM SYNECHOCOCCUS PCC7942
Descriptor: TRANSCRIPTIONAL REPRESSOR SMTB
Authors:Cook, W.J, Hall, L.M.
Deposit date:1997-09-16
Release date:1997-12-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the cyanobacterial metallothionein repressor SmtB: a model for metalloregulatory proteins.
J.Mol.Biol., 275, 1998
1SQT
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Substituted 2-Naphthamidine Inhibitors of Urokinase
Descriptor: 7-METHOXY-8-[1-(METHYLSULFONYL)-1H-PYRAZOL-4-YL]NAPHTHALENE-2-CARBOXIMIDAMIDE, Urokinase-type plasminogen activator
Authors:Wendt, M.D, Geyer, A, McClellan, W.J, Rockway, T.W, Weitzberg, M, Zhang, X, Mantei, R, Stewart, K, Nienaber, V, Klinghofer, V, Giranda, V.L.
Deposit date:2004-03-19
Release date:2004-04-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Interaction with the S1beta-pocket of urokinase: 8-heterocycle substituted and 6,8-disubstituted 2-naphthamidine urokinase inhibitors.
Bioorg.Med.Chem.Lett., 14, 2004
1RZ1
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Reduced flavin reductase PheA2 in complex with NAD
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, phenol 2-hydroxylase component B
Authors:Van Den Heuvel, R.H, Westphal, A.H, Heck, A.J, Walsh, M.A, Rovida, S, Van Berkel, W.J, Mattevi, A.
Deposit date:2003-12-23
Release date:2004-04-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Studies on Flavin Reductase PheA2 Reveal Binding of NAD in an Unusual Folded Conformation and Support Novel Mechanism of Action.
J.Biol.Chem., 279, 2004
1R50
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BU of 1r50 by Molmil
Bacillus subtilis lipase A with covalently bound Sc-IPG-phosphonate-inhibitor
Descriptor: Lipase, [(4S)-2,2-DIMETHYL-1,3-DIOXOLAN-4-YL]METHYL HYDROGEN HEX-5-ENYLPHOSPHONATE
Authors:Droege, M.J, Van Pouderoyen, G, Vrenken, T.E, Rueggeberg, C.J, Reetz, M.T, Dijkstra, B.W, Quax, W.J.
Deposit date:2003-10-09
Release date:2004-10-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Directed Evolution of Bacillus subtilis Lipase A by Use of Enantiomeric Phosphonate Inhibitors: Crystal Structures and Phage Display Selection
Chembiochem, 7, 2005

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數據於2024-07-31公開中

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